| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630890
Identifier: 225630890
GI number: 225630890
Start: 1296385
End: 1297116
Strand: Direct
Name: 225630890
Synonym: WRi_012050
Alternate gene names: NA
Gene position: 1296385-1297116 (Clockwise)
Preceding gene: 225630889
Following gene: 225630891
Centisome position: 89.66
GC content: 29.37
Gene sequence:
>732_bases ATGAATGATACTCAGCAAAAGTACATAGGTTGGTTCTTAATTGTATTGTTATTTACCGGTTACATCACAATAAATAACAT AATCTTTTTAAAAATAAATCAGCAAGAGAGTGAAAACAATGTGAAAGCTTTAACGGAAAACATGGATGAATTTAGAATGT TGCTTGAAGTTAATCAATCTAGAATAGAAAAAAAGATATTTGACCTCAAGAGAAGTCAGCATACTCAATGTGAGCAAGGT GATAATAACTCAAGATGTAAGAACCTTGCAAAATTGCTATTACTTGTGGTTAAAATGAAGAATTCGTTATTGCGAGAAGC AAAATTTTATAACCATATAAATTCAATAAAGCCTTTGATATCAGAGCTTGACGATCCAGAGATAGAAAATGCAGTAGATG AATTAGAAAATTTGAAAGAGATAAATACCTTACACGAATTGAAGTTATCTTTTGAAAAAACTATTGATACTATCGATTAC AACAAAAGTACATTGTCTAAAAAGATCATTTCAAACTGGATAAAGGTAGACGACCGAAATGATCCATTAAGAGTAAAATT CGCAGAAATTGAGGAGTCAATAAATGATAATGATTGGCAAAATATAACTGTTACAGTAAGCAATTTAACGCATTCAGAAT TCAAGCCATGGCTGAATAAATTGAATGGTTTTATTGTAGCTTCTAAGAATATTTCAACAATATATCATCACTTATTACAA TATATCTCATGA
Upstream 100 bases:
>100_bases GTAGTAAATATTTCTGCACTTGCGTTACTCTTATCATTTTTAGCGACAATTGCTCCTGCGTTGCAGGCAGCTGCACAAGA TCCTGCGGAGATACTACGTT
Downstream 100 bases:
>100_bases TTTATTTTATAATTTTCGCTTTTTCGTTTTTATTTGGTATATGGGTCAAGGTAAGTGGTGAAGTAATAAAATTGGAATTA GGCAATTACACTATAAGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MNDTQQKYIGWFLIVLLFTGYITINNIIFLKINQQESENNVKALTENMDEFRMLLEVNQSRIEKKIFDLKRSQHTQCEQG DNNSRCKNLAKLLLLVVKMKNSLLREAKFYNHINSIKPLISELDDPEIENAVDELENLKEINTLHELKLSFEKTIDTIDY NKSTLSKKIISNWIKVDDRNDPLRVKFAEIEESINDNDWQNITVTVSNLTHSEFKPWLNKLNGFIVASKNISTIYHHLLQ YIS
Sequences:
>Translated_243_residues MNDTQQKYIGWFLIVLLFTGYITINNIIFLKINQQESENNVKALTENMDEFRMLLEVNQSRIEKKIFDLKRSQHTQCEQG DNNSRCKNLAKLLLLVVKMKNSLLREAKFYNHINSIKPLISELDDPEIENAVDELENLKEINTLHELKLSFEKTIDTIDY NKSTLSKKIISNWIKVDDRNDPLRVKFAEIEESINDNDWQNITVTVSNLTHSEFKPWLNKLNGFIVASKNISTIYHHLLQ YIS >Mature_243_residues MNDTQQKYIGWFLIVLLFTGYITINNIIFLKINQQESENNVKALTENMDEFRMLLEVNQSRIEKKIFDLKRSQHTQCEQG DNNSRCKNLAKLLLLVVKMKNSLLREAKFYNHINSIKPLISELDDPEIENAVDELENLKEINTLHELKLSFEKTIDTIDY NKSTLSKKIISNWIKVDDRNDPLRVKFAEIEESINDNDWQNITVTVSNLTHSEFKPWLNKLNGFIVASKNISTIYHHLLQ YIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28517; Mature: 28517
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDTQQKYIGWFLIVLLFTGYITINNIIFLKINQQESENNVKALTENMDEFRMLLEVNQS CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH RIEKKIFDLKRSQHTQCEQGDNNSRCKNLAKLLLLVVKMKNSLLREAKFYNHINSIKPLI HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SELDDPEIENAVDELENLKEINTLHELKLSFEKTIDTIDYNKSTLSKKIISNWIKVDDRN HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC DPLRVKFAEIEESINDNDWQNITVTVSNLTHSEFKPWLNKLNGFIVASKNISTIYHHLLQ CCEEEEHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHH YIS HHC >Mature Secondary Structure MNDTQQKYIGWFLIVLLFTGYITINNIIFLKINQQESENNVKALTENMDEFRMLLEVNQS CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH RIEKKIFDLKRSQHTQCEQGDNNSRCKNLAKLLLLVVKMKNSLLREAKFYNHINSIKPLI HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SELDDPEIENAVDELENLKEINTLHELKLSFEKTIDTIDYNKSTLSKKIISNWIKVDDRN HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC DPLRVKFAEIEESINDNDWQNITVTVSNLTHSEFKPWLNKLNGFIVASKNISTIYHHLLQ CCEEEEHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHH YIS HHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA