| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630844
Identifier: 225630844
GI number: 225630844
Start: 1240762
End: 1241247
Strand: Direct
Name: 225630844
Synonym: WRi_011500
Alternate gene names: NA
Gene position: 1240762-1241247 (Clockwise)
Preceding gene: 225630843
Following gene: 225630846
Centisome position: 85.81
GC content: 35.6
Gene sequence:
>486_bases ATGTCTCTAAAGAATAAAATTTCTGAGTTAATAGAACAACAATTTAGCATTAAATACCATGACAATTATTTGGCTTACGC TATACATAAGTGGGCTGCAAGCGAAATATCTGATTCTATTACTTTTTGCATAATTGGTTGTGGAAATTGCAAGATTGGAT ATCAAGATGTTGCAAAGTCATTCAACATAACAAAAGAAGAAATTGACCAAGGTAATATTGCAAGCATAGAAAGTAAAATA AAAAGTGAAGCTGAAAAATCAGGTAGCGAGTTTTCTGAGTTGATTTCTAGAGTGGATCAATCGCTAAGAGAGCAGAGTGA AAAGTCTATTGTACAAATTTTAGATTCATCCGCTGAGGAGATGTTAAGGAGTTTCTGTGATAGCCCTGTACAGTCTCCAG AGCCTCAAGAACCCTCTGCTTCATCTGAAGAGCATGCTACAGAAGGCCCAGAAACTAGTGTTAATTCAGATCTTTTGTCA ACCTAA
Upstream 100 bases:
>100_bases GCTCTTGTTTTAATAATTAATTAAAGTAAAGCATGTAGTAAATGGTGTAATTGCTGTATCTTAACAAAAAGGTATAACGA ATGTAAGAGGAGGGTGCTTT
Downstream 100 bases:
>100_bases TCAACCCCATATATATGTTTTTTTTGTACCCATGCTTTGCGTTTTGGGGTGGAAAGAAAGCACCATTCTTCGTTGCATTT TTCTATCTTCATCACAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSLKNKISELIEQQFSIKYHDNYLAYAIHKWAASEISDSITFCIIGCGNCKIGYQDVAKSFNITKEEIDQGNIASIESKI KSEAEKSGSEFSELISRVDQSLREQSEKSIVQILDSSAEEMLRSFCDSPVQSPEPQEPSASSEEHATEGPETSVNSDLLS T
Sequences:
>Translated_161_residues MSLKNKISELIEQQFSIKYHDNYLAYAIHKWAASEISDSITFCIIGCGNCKIGYQDVAKSFNITKEEIDQGNIASIESKI KSEAEKSGSEFSELISRVDQSLREQSEKSIVQILDSSAEEMLRSFCDSPVQSPEPQEPSASSEEHATEGPETSVNSDLLS T >Mature_160_residues SLKNKISELIEQQFSIKYHDNYLAYAIHKWAASEISDSITFCIIGCGNCKIGYQDVAKSFNITKEEIDQGNIASIESKIK SEAEKSGSEFSELISRVDQSLREQSEKSIVQILDSSAEEMLRSFCDSPVQSPEPQEPSASSEEHATEGPETSVNSDLLST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17819; Mature: 17688
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKNKISELIEQQFSIKYHDNYLAYAIHKWAASEISDSITFCIIGCGNCKIGYQDVAKS CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHH FNITKEEIDQGNIASIESKIKSEAEKSGSEFSELISRVDQSLREQSEKSIVQILDSSAEE CCCCHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLRSFCDSPVQSPEPQEPSASSEEHATEGPETSVNSDLLST HHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHCC >Mature Secondary Structure SLKNKISELIEQQFSIKYHDNYLAYAIHKWAASEISDSITFCIIGCGNCKIGYQDVAKS CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHH FNITKEEIDQGNIASIESKIKSEAEKSGSEFSELISRVDQSLREQSEKSIVQILDSSAEE CCCCHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLRSFCDSPVQSPEPQEPSASSEEHATEGPETSVNSDLLST HHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA