Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

Click here to switch to the map view.

The map label for this gene is 225630787

Identifier: 225630787

GI number: 225630787

Start: 1182179

End: 1182769

Strand: Reverse

Name: 225630787

Synonym: WRi_010900

Alternate gene names: NA

Gene position: 1182769-1182179 (Counterclockwise)

Preceding gene: 225630790

Following gene: 225630786

Centisome position: 81.8

GC content: 31.3

Gene sequence:

>591_bases
ATGAATATTACTAAAGTTTTAACTATTATTGTTTTTATTGTAATGTCTTCAAGTGCTTACACTAATTGTACAGATCACAA
AATTTTTGTGCATACTATGAAACAACAAGTAGACAGCATATCTACAAAAGGAAATAGAAAAAACCTAGGGCATGTACACG
AAAAGCTTCAGGAGGTCATTCAGAATAATGTTAACCTCAAAGAAATATCTCGATTTGTCATGGGAAAATATGGGGTTTTG
ACTACCCAGAAGGAAAGGGAAGATTTCTTAAGAGAGTATGAAGTGTATCTTACACGTTTGTGCGTTAAAATTTTATCTAA
ATACATGAGTAATAGTGAAATGATCATAATGAGTACAAAAGCAGTTGACGATGAAACTTGCTTAATTGGCACAAGGTTCT
CTTACGGTGATGAAGAATTTACAAATATTGATTTTAAAGTTACTAAAAATCACAGTTCTTTCTTGATAAGTGATGTTGTA
ATGAGTGGAATAAGTATTGCTATTAATCAACGTTCTCAATTTAGTGAGAAGATTGACACGCATGGCATAGCAAGTGTGAT
AGGTGAATTAAAATGTAACAATAATCTATGA

Upstream 100 bases:

>100_bases
CTTGAATTATAGATGATTTACACAGAGCATGTCTATAGGTATATTAAAGTCAGCGATTGTTATTTAATCTTTATTAAACT
TTGCATTTTAAGTATATCTT

Downstream 100 bases:

>100_bases
TATATATGCCTCATTGGCCTAAGCCACTTGGTAGCAGGCCGAATGATTTTTCTCTTGATCGCATAAAAAGCTTTCTTAGT
AAACTAGATAATCCCGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MNITKVLTIIVFIVMSSSAYTNCTDHKIFVHTMKQQVDSISTKGNRKNLGHVHEKLQEVIQNNVNLKEISRFVMGKYGVL
TTQKEREDFLREYEVYLTRLCVKILSKYMSNSEMIIMSTKAVDDETCLIGTRFSYGDEEFTNIDFKVTKNHSSFLISDVV
MSGISIAINQRSQFSEKIDTHGIASVIGELKCNNNL

Sequences:

>Translated_196_residues
MNITKVLTIIVFIVMSSSAYTNCTDHKIFVHTMKQQVDSISTKGNRKNLGHVHEKLQEVIQNNVNLKEISRFVMGKYGVL
TTQKEREDFLREYEVYLTRLCVKILSKYMSNSEMIIMSTKAVDDETCLIGTRFSYGDEEFTNIDFKVTKNHSSFLISDVV
MSGISIAINQRSQFSEKIDTHGIASVIGELKCNNNL
>Mature_196_residues
MNITKVLTIIVFIVMSSSAYTNCTDHKIFVHTMKQQVDSISTKGNRKNLGHVHEKLQEVIQNNVNLKEISRFVMGKYGVL
TTQKEREDFLREYEVYLTRLCVKILSKYMSNSEMIIMSTKAVDDETCLIGTRFSYGDEEFTNIDFKVTKNHSSFLISDVV
MSGISIAINQRSQFSEKIDTHGIASVIGELKCNNNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22348; Mature: 22348

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITKVLTIIVFIVMSSSAYTNCTDHKIFVHTMKQQVDSISTKGNRKNLGHVHEKLQEVI
CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
QNNVNLKEISRFVMGKYGVLTTQKEREDFLREYEVYLTRLCVKILSKYMSNSEMIIMSTK
HCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
AVDDETCLIGTRFSYGDEEFTNIDFKVTKNHSSFLISDVVMSGISIAINQRSQFSEKIDT
CCCCCEEEEECCCCCCCCHHCCCEEEEECCCCHHHHHHHHHCCHHEEECCHHHHHHHHHH
HGIASVIGELKCNNNL
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNITKVLTIIVFIVMSSSAYTNCTDHKIFVHTMKQQVDSISTKGNRKNLGHVHEKLQEVI
CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
QNNVNLKEISRFVMGKYGVLTTQKEREDFLREYEVYLTRLCVKILSKYMSNSEMIIMSTK
HCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
AVDDETCLIGTRFSYGDEEFTNIDFKVTKNHSSFLISDVVMSGISIAINQRSQFSEKIDT
CCCCCEEEEECCCCCCCCHHCCCEEEEECCCCHHHHHHHHHCCHHEEECCHHHHHHHHHH
HGIASVIGELKCNNNL
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA