| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is fabH
Identifier: 225630649
GI number: 225630649
Start: 1004824
End: 1005732
Strand: Reverse
Name: fabH
Synonym: WRi_009330
Alternate gene names: 225630649
Gene position: 1005732-1004824 (Counterclockwise)
Preceding gene: 225630650
Following gene: 225630646
Centisome position: 69.56
GC content: 37.51
Gene sequence:
>909_bases ATGTTGAGTAACAACGAAATTGCATCGATAGTTGAGACGAGCGATGAATGGATAAGGCAGAGAACAGGAATAGTTCAAAG GCATATAGCAGATGAAGGAGAACTAACGTCAGATCTAGCTGTAAATGCAGCAAAAAGTGCTATAGAAAAAGCTAAAATTT CAGTAGATGAAATTGACTTGATTATAGTTGCTACAACAACTCCTGATAAAACTTTTCCTAGCTGTGCAACGATTGTACAA AGTAAGTTAAAATGTAAAAACGCATTTGCTTTTGATGTACAAGCAGCATGCTCTGGTTTTATATATGCAGTTACAGTTGC TGATTCGCTCATAAAATCTAACAATAGAATTAAATATGCATTGGTTATAGGTGCTGAAATAATGTCTAGGATTGTTGATT GGGAAGATAGGTCAACTTGTGTACTCTTTGGTGATGGTGCTGGTGCAGTGGTGATGAAATCAGAAATGGGTAGAAGCGGC ATCATATCAACAAACTTATACTCTGACGGCAATGTGGACATACTATGTACGAACGGAGGGATATCCTCAACTGGTGATTC TGGAAAAATATGCATGAATGGAAGAGAAGTGTTTAAACATGCAGTGGATAAGTTAACAGCCTCAGTAGAGGAAACTCTGA AATGCAATAATTTGAAAATCACTGATATTGACTGGTTAATTCCCCATCAAGCAAACATTCGTATTATTGAAGCAGTAGTA AAGAAATTAGATTTTCCTATAGAGAAAGTGATTAATACCGTTGATAAGCATGCAAACACCTCAGCGGCATCAATTCCACT GGCCTTAGACTATGCAATACAAGAATCAAAAATAAAATCAGGAAATCTGGTACTGCTGATTTCAATAGGTGCAGGCCTGA CCTGGGGTTCCGTGTTGCTGCACTATTAG
Upstream 100 bases:
>100_bases AATGCAATTAGTGAAAATTTAAATCAAAAGATAATTAACGGGGTAAGTCATATTGAATAAAAGTTTCATATTAAGCACTG GATCTTACCTACCAAGAAAA
Downstream 100 bases:
>100_bases ACTTCCTGCATTACCTCCTGTCATCCAAGTACCCTCTTTGTCATTCCAGTGCCTCTTTCTCCTGTCATCCCAGTGCCCCC TTTTGTCATCCCAGTAGCCC
Product: 3-oxoacyl-(acyl-carrier-protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MLSNNEIASIVETSDEWIRQRTGIVQRHIADEGELTSDLAVNAAKSAIEKAKISVDEIDLIIVATTTPDKTFPSCATIVQ SKLKCKNAFAFDVQAACSGFIYAVTVADSLIKSNNRIKYALVIGAEIMSRIVDWEDRSTCVLFGDGAGAVVMKSEMGRSG IISTNLYSDGNVDILCTNGGISSTGDSGKICMNGREVFKHAVDKLTASVEETLKCNNLKITDIDWLIPHQANIRIIEAVV KKLDFPIEKVINTVDKHANTSAASIPLALDYAIQESKIKSGNLVLLISIGAGLTWGSVLLHY
Sequences:
>Translated_302_residues MLSNNEIASIVETSDEWIRQRTGIVQRHIADEGELTSDLAVNAAKSAIEKAKISVDEIDLIIVATTTPDKTFPSCATIVQ SKLKCKNAFAFDVQAACSGFIYAVTVADSLIKSNNRIKYALVIGAEIMSRIVDWEDRSTCVLFGDGAGAVVMKSEMGRSG IISTNLYSDGNVDILCTNGGISSTGDSGKICMNGREVFKHAVDKLTASVEETLKCNNLKITDIDWLIPHQANIRIIEAVV KKLDFPIEKVINTVDKHANTSAASIPLALDYAIQESKIKSGNLVLLISIGAGLTWGSVLLHY >Mature_302_residues MLSNNEIASIVETSDEWIRQRTGIVQRHIADEGELTSDLAVNAAKSAIEKAKISVDEIDLIIVATTTPDKTFPSCATIVQ SKLKCKNAFAFDVQAACSGFIYAVTVADSLIKSNNRIKYALVIGAEIMSRIVDWEDRSTCVLFGDGAGAVVMKSEMGRSG IISTNLYSDGNVDILCTNGGISSTGDSGKICMNGREVFKHAVDKLTASVEETLKCNNLKITDIDWLIPHQANIRIIEAVV KKLDFPIEKVINTVDKHANTSAASIPLALDYAIQESKIKSGNLVLLISIGAGLTWGSVLLHY
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family
Homologues:
Organism=Escherichia coli, GI1787333, Length=302, Percent_Identity=49.0066225165563, Blast_Score=283, Evalue=1e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FABH_WOLPM (Q73GG9)
Other databases:
- EMBL: AE017196 - RefSeq: NP_966713.1 - ProteinModelPortal: Q73GG9 - SMR: Q73GG9 - EnsemblBacteria: EBWOLT00000003875 - GeneID: 2738468 - GenomeReviews: AE017196_GR - KEGG: wol:WD0985 - TIGR: WD_0985 - GeneTree: EBGT00050000031462 - HOGENOM: HBG649927 - OMA: ICATSTP - PhylomeDB: Q73GG9 - ProtClustDB: CLSK739999 - BioCyc: WPIP955:WD_0985-MONOMER - GO: GO:0005737 - HAMAP: MF_01815 - InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 - Gene3D: G3DSA:3.40.47.10 - TIGRFAMs: TIGR00747
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C; SSF53901 Thiolase-like
EC number: =2.3.1.180
Molecular weight: Translated: 32578; Mature: 32578
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: ACT_SITE 113-113 ACT_SITE 245-245 ACT_SITE 275-275
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSNNEIASIVETSDEWIRQRTGIVQRHIADEGELTSDLAVNAAKSAIEKAKISVDEIDL CCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEECEEEE IIVATTTPDKTFPSCATIVQSKLKCKNAFAFDVQAACSGFIYAVTVADSLIKSNNRIKYA EEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHCCEEEEEEHHHHHHHCCCCEEEE LVIGAEIMSRIVDWEDRSTCVLFGDGAGAVVMKSEMGRSGIISTNLYSDGNVDILCTNGG EEECHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCEEEEEECCCCEEEEEECCC ISSTGDSGKICMNGREVFKHAVDKLTASVEETLKCNNLKITDIDWLIPHQANIRIIEAVV CCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHH KKLDFPIEKVINTVDKHANTSAASIPLALDYAIQESKIKSGNLVLLISIGAGLTWGSVLL HHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEHHHHCCCCCCCEEEEEEECCCCCHHHHHC HY CC >Mature Secondary Structure MLSNNEIASIVETSDEWIRQRTGIVQRHIADEGELTSDLAVNAAKSAIEKAKISVDEIDL CCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEECEEEE IIVATTTPDKTFPSCATIVQSKLKCKNAFAFDVQAACSGFIYAVTVADSLIKSNNRIKYA EEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHCCEEEEEEHHHHHHHCCCCEEEE LVIGAEIMSRIVDWEDRSTCVLFGDGAGAVVMKSEMGRSGIISTNLYSDGNVDILCTNGG EEECHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCEEEEEECCCCEEEEEECCC ISSTGDSGKICMNGREVFKHAVDKLTASVEETLKCNNLKITDIDWLIPHQANIRIIEAVV CCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHH KKLDFPIEKVINTVDKHANTSAASIPLALDYAIQESKIKSGNLVLLISIGAGLTWGSVLL HHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEHHHHCCCCCCCEEEEEEECCCCCHHHHHC HY CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA