Click here to switch to the map view.

The map label for this gene is ybhL [C]

Identifier: 225630620

GI number: 225630620

Start: 966497

End: 967219

Strand: Reverse

Name: ybhL [C]

Synonym: WRi_008910

Alternate gene names: 225630620

Gene position: 967219-966497 (Counterclockwise)

Preceding gene: 225630621

Following gene: 225630619

Centisome position: 66.9

GC content: 34.3

Gene sequence:

>723_bases
ATGTCTTACATGAGAAATGAACAGGATATTCGCTCTCAAGGCGTTTATTATAGTGCTGGGCTTAGAAGTTACCTAACTAA
AGTATATAACTACATGGCTTTAGCTTTGGGCGTCACAGGGCTTGTTGCATTTTTAACAGTATTTTCTGGTCTTTTTCAAG
TAATTTATTCTAATCCCGTTCTATCGCTTGTGGTAATGTTATCTCCGGTTGCATTGGTGTTCTACATGTCTTATAGAATT
CAACACCTAAGTGCTCAGTCTGCCGTTACTATATTTTTCTCGTTCTCAGTGTTAATGGGGCTTTCCTTATCTTATATTTT
TATAGTTTATACTGCAGAAAATATAGCAAGAGCGTTTTTCATTACATCAATTATGTTTGGCTCTATGGCTTTATATGGTA
ATACCACAAAAAGAGATCTTACAAGTATGGGCTCTTTCTTGATTATGGGAGTCTTGGGGATAATTATAGCATCCATAGTA
AATTTATTCCTTGGAAGTAGTCCTCTCTACTTTGCAATATCGTTCATATCAGTAATAGTCTTTACCTTAATGACTGCATA
TGATGCTCAAAGAATCAAGGACGTTTATTATAAACATAATGACGGATCAGAAGTTGCTACTACTAAATTGGCAATACTCG
GTGCAACTAATCTTTATTTTGACTTTATTAATATATTTCTCAATCTACTCAGGTTACTTAACTTGTTCAACAATAGGGAT
TAG

Upstream 100 bases:

>100_bases
AAAACAAATGCCAGCGCATAGCTGTTTATAATAAAAACACTTGATAAAAATATGGTTTTATATTATAATGTGTTAAGTAA
TGGATAAAAGGAGTTATATT

Downstream 100 bases:

>100_bases
ATGTTTTCCTTTTTAAGGAAAGGCAGTAAGAATTCTATAGTTTTCTTTCTAATATCTCTAGTTGTATTGATGTTATGTCT
TGCATATGCATCGGTGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MSYMRNEQDIRSQGVYYSAGLRSYLTKVYNYMALALGVTGLVAFLTVFSGLFQVIYSNPVLSLVVMLSPVALVFYMSYRI
QHLSAQSAVTIFFSFSVLMGLSLSYIFIVYTAENIARAFFITSIMFGSMALYGNTTKRDLTSMGSFLIMGVLGIIIASIV
NLFLGSSPLYFAISFISVIVFTLMTAYDAQRIKDVYYKHNDGSEVATTKLAILGATNLYFDFINIFLNLLRLLNLFNNRD

Sequences:

>Translated_240_residues
MSYMRNEQDIRSQGVYYSAGLRSYLTKVYNYMALALGVTGLVAFLTVFSGLFQVIYSNPVLSLVVMLSPVALVFYMSYRI
QHLSAQSAVTIFFSFSVLMGLSLSYIFIVYTAENIARAFFITSIMFGSMALYGNTTKRDLTSMGSFLIMGVLGIIIASIV
NLFLGSSPLYFAISFISVIVFTLMTAYDAQRIKDVYYKHNDGSEVATTKLAILGATNLYFDFINIFLNLLRLLNLFNNRD
>Mature_239_residues
SYMRNEQDIRSQGVYYSAGLRSYLTKVYNYMALALGVTGLVAFLTVFSGLFQVIYSNPVLSLVVMLSPVALVFYMSYRIQ
HLSAQSAVTIFFSFSVLMGLSLSYIFIVYTAENIARAFFITSIMFGSMALYGNTTKRDLTSMGSFLIMGVLGIIIASIVN
LFLGSSPLYFAISFISVIVFTLMTAYDAQRIKDVYYKHNDGSEVATTKLAILGATNLYFDFINIFLNLLRLLNLFNNRD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787004, Length=222, Percent_Identity=43.6936936936937, Blast_Score=171, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 26887; Mature: 26756

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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>Mature Secondary Structure 
SYMRNEQDIRSQGVYYSAGLRSYLTKVYNYMALALGVTGLVAFLTVFSGLFQVIYSNPV
CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LSLVVMLSPVALVFYMSYRIQHLSAQSAVTIFFSFSVLMGLSLSYIFIVYTAENIARAFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHH
ITSIMFGSMALYGNTTKRDLTSMGSFLIMGVLGIIIASIVNLFLGSSPLYFAISFISVIV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
FTLMTAYDAQRIKDVYYKHNDGSEVATTKLAILGATNLYFDFINIFLNLLRLLNLFNNRD
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]