| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is folA [H]
Identifier: 225630593
GI number: 225630593
Start: 931971
End: 932459
Strand: Reverse
Name: folA [H]
Synonym: WRi_008610
Alternate gene names: 225630593
Gene position: 932459-931971 (Counterclockwise)
Preceding gene: 225630594
Following gene: 225630592
Centisome position: 64.49
GC content: 33.74
Gene sequence:
>489_bases ATGCTAGTTATCGGAATTATGGCTGTTGATCCCAAGGGGGTAATTGGAATAAATAATGGATTGCCCTGGCATTATCCAAG TGAGTTAGATCATTTTCGTCAGGTGACTGACAAACAAGTTATTGTTATGGGGAGAAAGACATTTGAAACTATGCCTCAAG ACATATTAGGGAATCGTATTCCTATTGTTTTTTCTCGTGACAAATTAAATTCTTGTTTTAACAGAGGAGTAAAATGCACT ATTATTTCTTCTATGCAAGAGTTTTTGTCAATCCAAAGTAATTGGAGTTACCCTCAAATCTTTGTGATTGGTGGAGCACA AATAGCGCATCTTTTTTTAGAATATAATCTAATTTCAGAGTTCATCATGACAGAAATTTACAAACCCTATAAAGGTGATG TATATTTCAACTTAACACTTCTTGATGGATGGCATAAAACTATTCTCACCAAAACGAAAGATTATACTATATGTAGGCTA ACACGTTAA
Upstream 100 bases:
>100_bases TTGCTTTATCATCTGCATTGCACAACAAGGTTGATTTCCTTCGAGTGCATAATGTGCGTGATCACATGCGATTTTTTGTA GCTCAAGCTGCTTTACAGGG
Downstream 100 bases:
>100_bases TATGCATGTTAAAGCAATTTATACCCACCGCATTGAATGTGGAGAAGTATTAGAGCAGGTTCTTGATCGCTATGTTTCAG AGTTGCTAGGAGAGGAAGTT
Product: dihydrofolate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MLVIGIMAVDPKGVIGINNGLPWHYPSELDHFRQVTDKQVIVMGRKTFETMPQDILGNRIPIVFSRDKLNSCFNRGVKCT IISSMQEFLSIQSNWSYPQIFVIGGAQIAHLFLEYNLISEFIMTEIYKPYKGDVYFNLTLLDGWHKTILTKTKDYTICRL TR
Sequences:
>Translated_162_residues MLVIGIMAVDPKGVIGINNGLPWHYPSELDHFRQVTDKQVIVMGRKTFETMPQDILGNRIPIVFSRDKLNSCFNRGVKCT IISSMQEFLSIQSNWSYPQIFVIGGAQIAHLFLEYNLISEFIMTEIYKPYKGDVYFNLTLLDGWHKTILTKTKDYTICRL TR >Mature_162_residues MLVIGIMAVDPKGVIGINNGLPWHYPSELDHFRQVTDKQVIVMGRKTFETMPQDILGNRIPIVFSRDKLNSCFNRGVKCT IISSMQEFLSIQSNWSYPQIFVIGGAQIAHLFLEYNLISEFIMTEIYKPYKGDVYFNLTLLDGWHKTILTKTKDYTICRL TR
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI17505899, Length=144, Percent_Identity=30.5555555555556, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324810, Length=121, Percent_Identity=33.8842975206612, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 18711; Mature: 18711
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVIGIMAVDPKGVIGINNGLPWHYPSELDHFRQVTDKQVIVMGRKTFETMPQDILGNRI CEEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHCCCCEEEEEECHHHHCCCHHHCCCCC PIVFSRDKLNSCFNRGVKCTIISSMQEFLSIQSNWSYPQIFVIGGAQIAHLFLEYNLISE CEEEEHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH FIMTEIYKPYKGDVYFNLTLLDGWHKTILTKTKDYTICRLTR HHHHHHCCCCCCCEEEEEEEECCCCHHHEECCCCCEEEEECC >Mature Secondary Structure MLVIGIMAVDPKGVIGINNGLPWHYPSELDHFRQVTDKQVIVMGRKTFETMPQDILGNRI CEEEEEEEECCCCEEECCCCCCCCCCHHHHHHHHCCCCEEEEEECHHHHCCCHHHCCCCC PIVFSRDKLNSCFNRGVKCTIISSMQEFLSIQSNWSYPQIFVIGGAQIAHLFLEYNLISE CEEEEHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH FIMTEIYKPYKGDVYFNLTLLDGWHKTILTKTKDYTICRLTR HHHHHHCCCCCCCEEEEEEEECCCCHHHEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7574597; 11337471 [H]