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The map label for this gene is yfhF [C]

Identifier: 225630587

GI number: 225630587

Start: 925311

End: 925724

Strand: Reverse

Name: yfhF [C]

Synonym: WRi_008530

Alternate gene names: 225630587

Gene position: 925724-925311 (Counterclockwise)

Preceding gene: 225630588

Following gene: 225630586

Centisome position: 64.03

GC content: 34.54

Gene sequence:

>414_bases
ATGGGTGAATATCAAGAAGTAGGCGGAGGTGAAACTGTAAAAAAGAATAAAAAACTTATCACTATAACTGCGGAAGCAGT
AGAAAGGATAAGGTATTTATTGGACCAAAAGAAGCATACTAACCTTGAGAAACCGGAAGAAGCAATAGGAATAAGAGTGC
TAATTAAGCAAAAAGGATGTTCTGGTTTAAAATATGATATTGAATATGCATATGATACTCGTCCTTTAGAGTCGATAATT
GAGGAAAACTGTAGTGATGGCCAAAAAGTTAAAGTGTTGATCGACCCAAAATCCGTCATGTTTATTCTTGGCTCTGAAAT
GGATTATGTAGAAGAAAAATTTTCATCGGGTTTTGTTTTCAAAAATCCTAATGAGAAAGGAAAATGTGGTTGTGGAGAGA
GTTTTCATGTCTAG

Upstream 100 bases:

>100_bases
ACCTCCAGTGAAGATACACTGTTCGGTACTTGCTGAAGATGCTATAAAGGCTGCTATTCATGACTATCAAAGTAAACAAA
AGAATTAAGAAGCTACGAAC

Downstream 100 bases:

>100_bases
CAACTATTTTGCATTGTTTGAAATTGAACCAGCTTTCAATATCAGTTTTGATGAGTTAGAGAAAAAATATATTGAGCTAA
GCAGGACTGATATAAATGAA

Product: HesB/YadR/YfhF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MGEYQEVGGGETVKKNKKLITITAEAVERIRYLLDQKKHTNLEKPEEAIGIRVLIKQKGCSGLKYDIEYAYDTRPLESII
EENCSDGQKVKVLIDPKSVMFILGSEMDYVEEKFSSGFVFKNPNEKGKCGCGESFHV

Sequences:

>Translated_137_residues
MGEYQEVGGGETVKKNKKLITITAEAVERIRYLLDQKKHTNLEKPEEAIGIRVLIKQKGCSGLKYDIEYAYDTRPLESII
EENCSDGQKVKVLIDPKSVMFILGSEMDYVEEKFSSGFVFKNPNEKGKCGCGESFHV
>Mature_136_residues
GEYQEVGGGETVKKNKKLITITAEAVERIRYLLDQKKHTNLEKPEEAIGIRVLIKQKGCSGLKYDIEYAYDTRPLESIIE
ENCSDGQKVKVLIDPKSVMFILGSEMDYVEEKFSSGFVFKNPNEKGKCGCGESFHV

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=125, Percent_Identity=43.2, Blast_Score=99, Evalue=9e-22,
Organism=Escherichia coli, GI1788877, Length=118, Percent_Identity=35.5932203389831, Blast_Score=87, Evalue=5e-19,
Organism=Escherichia coli, GI1786351, Length=116, Percent_Identity=31.0344827586207, Blast_Score=68, Evalue=2e-13,
Organism=Escherichia coli, GI1787974, Length=118, Percent_Identity=33.0508474576271, Blast_Score=64, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI25146411, Length=131, Percent_Identity=48.0916030534351, Blast_Score=117, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI193209025, Length=121, Percent_Identity=50.4132231404959, Blast_Score=113, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6323001, Length=119, Percent_Identity=45.3781512605042, Blast_Score=106, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24642263, Length=128, Percent_Identity=44.53125, Blast_Score=103, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 15457; Mature: 15326

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEYQEVGGGETVKKNKKLITITAEAVERIRYLLDQKKHTNLEKPEEAIGIRVLIKQKGC
CCCCCCCCCCCEECCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHCCEEEEEEECCC
SGLKYDIEYAYDTRPLESIIEENCSDGQKVKVLIDPKSVMFILGSEMDYVEEKFSSGFVF
CCCEEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHCCCEE
KNPNEKGKCGCGESFHV
ECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GEYQEVGGGETVKKNKKLITITAEAVERIRYLLDQKKHTNLEKPEEAIGIRVLIKQKGC
CCCCCCCCCCEECCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHCCEEEEEEECCC
SGLKYDIEYAYDTRPLESIIEENCSDGQKVKVLIDPKSVMFILGSEMDYVEEKFSSGFVF
CCCEEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHCCCEE
KNPNEKGKCGCGESFHV
ECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]