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The map label for this gene is 225630560

Identifier: 225630560

GI number: 225630560

Start: 887066

End: 889453

Strand: Reverse

Name: 225630560

Synonym: WRi_008210

Alternate gene names: NA

Gene position: 889453-887066 (Counterclockwise)

Preceding gene: 225630561

Following gene: 225630559

Centisome position: 61.52

GC content: 34.0

Gene sequence:

>2388_bases
ATGCTAAAATTTTTGCTGATAATACCGTTTTTTTTTCTGTCAGGCTGCGGGGAACATCACTGTATTAAGCCAGAAAATTT
ATCAGGTTTGCGTGAAAAACTAGATATAGTGTCAACAGAGCAGAAATGGGTTGATTCTGGTGTTAATATCTCAGATAGAA
TAAGAGTAACAGAGATTGATATAGTGCCTAGTAAGGTTAATTTTTGTCCTAAGCAGTATGCAGATTTTGCAATTGGGCCT
GGGAGAAATGACGTTGCATTACCATTTGCACTTAAAAAAGGCGATACGATAAGCTTTAGTGTGATTGGAAGTAAAGTGTG
TAAAGATAAAGAGAGTGAGACAAAAATCAGGTATTTGAAAATCGACGAAAAGTGTAGCGAGCAAGAAACGGAACATTTTG
CACATGTTTTAAATCAAGAGAAATGCCAAGGTGGCAAGGATGGGATATGTCCTAATAAATATATAATAGGCGATGCGCAA
TGGTTGAGTGGAAGAGAGTACTGGTTTTCGAAGTTAGATCAAGATGAAAGAAAAAAGGAAATTGAAAATATTATTAACTC
TATAAAACAAGGAGAGAATATAGATTGCAGCAAGCTTTCAGAGAGCAGTGCAAGTAAGATAGATACGCACATTTTAAATT
CACTCTGTAGACGTATATGTAAATTTTCTTCTGGTCGTAGAGGCGAGGATTGCGTGTATATTGAATATAATAATATAGAA
ATTGAGCTATTCAATGCTTTAAATTCTAGTGGTGAATCTGTTGTTGCTGAAATTATTAGTAACGTATTAAAGGGAAAACA
GGTAAAAACTGACATTACATTTCTAAAAGTTGGTATGGATAATGAAACTCTTGAACACATTCCAGGTGGTGGTTTATGTA
CTAGTTGTGATCATAAGATGGAGAATGACCATCAAATACCAAGTTTAACTTTTAGTCTATGTAGCAGAAATGACAAGAGC
TGCTACAATACAAATGACAAAGGCGGGTTCAACATAAGAGTAACGAAGAACCATAGTCTGGAAAATAGCTTGTATATAAG
TGTTTCCGATAAATTCCCTGAGCATAAGCCTGGTGAAAATCAAGCGGATATATCTGTAGATATCAGCAAAGTTCATGACA
TGGAAAACTTGAAAGGAAAATTAAAAGACAAAACAGGCACCATATATTACGGAATAAGAGACCATGGCTGCGATTACAAA
AATGAAGGTCAGTTTAGCATTAACCTAACAACTCAAGAGCCACCTACAAAAACTTTTAGTGCAATATATAATTTCTTTGA
TGAAAAAGTGAAAACTGCATTTTTCGGCTCTAATTATAAAGACCCTAACGCAATTCACTCTGATACTAGTCCTGTAAAGT
CTCTTTACGAAAGTTTTATAAAATCAAGCAGAACAAATACCATTAGATCTACTATAATATCACTATTAGTACTATATATA
ATCTTATATACTCTTTATTACTTTTTTGGATTAACTCATATTTCTATATATGAGTTTTTAATTATATGCGTAAAGATAGG
AATCATCGCTCAGCTATTGCAGGATAATAGCTGGGACTTTTTTTATAACAACGCATTCTCTATATTTATTAACACTCCAA
AACAACTAATAGAAATAGCAAATTTTAGAGGCACTACTTCAAATGTTTTTGAGTTTCTTGATTTGCCGCTCAATAGGTTC
TTGTCATCGCATTCAGTATTGTTAATAGTATCTCTTATATTTTCTGGCCCTTTGGGCATTGTATCTTTTTGCTTGGTGAT
TTGGGGTTTAATCACAGTGAGCTTATCTATTTTTAATGCCTTATTTTCTTTTATTACATCTATAGCAATAGTTGCGTTAT
TACTTTCTTTAGCACCTATTTTTATTATTTGTCTTTTATTTGCGTATACTAGGCAGATGTTTCAAAACTGGGTTAAAAAT
TTAGCAAGATTTGCAATTCATCCAGTGGTCCTTTTAATTTTTATATCACTGATAAGTCAGGTTATGGATTATATTGTGTA
TTCAGTATTTGATTTTGAGGTCTGCTCTACATGTATACTTAATATTAACCTAAAGATTTTTAACCCTTGTATTTTTTATG
GTTATGCTTCCAAATATACACCTAATATTACCGCTATGATGGCTTTTGTTATTTTGGGACACGCTATGAAAGCTTTAGTT
GAAGCTTCTTCGGCAATATCTGACTCGTTGTTTGGTGCTTATGTAGCAAGCGAACCTGGAAGACAGTATCAACAAAGCTT
AATGGGAACAGTAGGGTTAGATGAACAAAGCGTTCAAAGAAGAGAAAGAGGAGATGCCTCTCAACAGTCAGGTACGTCAA
GACCTCAAATACCACAAGGGACTCAAAGGTCAACGCCTCAGATACCACAACCAGGAAGACAGCAATGA

Upstream 100 bases:

>100_bases
TGCTGCTAAGAAGTTGAGTGGTGGAGACAAGAGTAAATCTCGAGGTTCTGGTTCTAGTAGCTCCGAGAGTGTTAACAAAA
GCACTGAATGAGTTGGATTT

Downstream 100 bases:

>100_bases
TAAGTAAAAGATCACTATTATTGATACTGTGTCTTGCAATCACTGGTTGTAATATGGATTGTGTCGAGCCTGGGTTGCAG
AGCAAAAACACCAGCGTTAA

Product: Type IV secretion system protein VirB6, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 795; Mature: 795

Protein sequence:

>795_residues
MLKFLLIIPFFFLSGCGEHHCIKPENLSGLREKLDIVSTEQKWVDSGVNISDRIRVTEIDIVPSKVNFCPKQYADFAIGP
GRNDVALPFALKKGDTISFSVIGSKVCKDKESETKIRYLKIDEKCSEQETEHFAHVLNQEKCQGGKDGICPNKYIIGDAQ
WLSGREYWFSKLDQDERKKEIENIINSIKQGENIDCSKLSESSASKIDTHILNSLCRRICKFSSGRRGEDCVYIEYNNIE
IELFNALNSSGESVVAEIISNVLKGKQVKTDITFLKVGMDNETLEHIPGGGLCTSCDHKMENDHQIPSLTFSLCSRNDKS
CYNTNDKGGFNIRVTKNHSLENSLYISVSDKFPEHKPGENQADISVDISKVHDMENLKGKLKDKTGTIYYGIRDHGCDYK
NEGQFSINLTTQEPPTKTFSAIYNFFDEKVKTAFFGSNYKDPNAIHSDTSPVKSLYESFIKSSRTNTIRSTIISLLVLYI
ILYTLYYFFGLTHISIYEFLIICVKIGIIAQLLQDNSWDFFYNNAFSIFINTPKQLIEIANFRGTTSNVFEFLDLPLNRF
LSSHSVLLIVSLIFSGPLGIVSFCLVIWGLITVSLSIFNALFSFITSIAIVALLLSLAPIFIICLLFAYTRQMFQNWVKN
LARFAIHPVVLLIFISLISQVMDYIVYSVFDFEVCSTCILNINLKIFNPCIFYGYASKYTPNITAMMAFVILGHAMKALV
EASSAISDSLFGAYVASEPGRQYQQSLMGTVGLDEQSVQRRERGDASQQSGTSRPQIPQGTQRSTPQIPQPGRQQ

Sequences:

>Translated_795_residues
MLKFLLIIPFFFLSGCGEHHCIKPENLSGLREKLDIVSTEQKWVDSGVNISDRIRVTEIDIVPSKVNFCPKQYADFAIGP
GRNDVALPFALKKGDTISFSVIGSKVCKDKESETKIRYLKIDEKCSEQETEHFAHVLNQEKCQGGKDGICPNKYIIGDAQ
WLSGREYWFSKLDQDERKKEIENIINSIKQGENIDCSKLSESSASKIDTHILNSLCRRICKFSSGRRGEDCVYIEYNNIE
IELFNALNSSGESVVAEIISNVLKGKQVKTDITFLKVGMDNETLEHIPGGGLCTSCDHKMENDHQIPSLTFSLCSRNDKS
CYNTNDKGGFNIRVTKNHSLENSLYISVSDKFPEHKPGENQADISVDISKVHDMENLKGKLKDKTGTIYYGIRDHGCDYK
NEGQFSINLTTQEPPTKTFSAIYNFFDEKVKTAFFGSNYKDPNAIHSDTSPVKSLYESFIKSSRTNTIRSTIISLLVLYI
ILYTLYYFFGLTHISIYEFLIICVKIGIIAQLLQDNSWDFFYNNAFSIFINTPKQLIEIANFRGTTSNVFEFLDLPLNRF
LSSHSVLLIVSLIFSGPLGIVSFCLVIWGLITVSLSIFNALFSFITSIAIVALLLSLAPIFIICLLFAYTRQMFQNWVKN
LARFAIHPVVLLIFISLISQVMDYIVYSVFDFEVCSTCILNINLKIFNPCIFYGYASKYTPNITAMMAFVILGHAMKALV
EASSAISDSLFGAYVASEPGRQYQQSLMGTVGLDEQSVQRRERGDASQQSGTSRPQIPQGTQRSTPQIPQPGRQQ
>Mature_795_residues
MLKFLLIIPFFFLSGCGEHHCIKPENLSGLREKLDIVSTEQKWVDSGVNISDRIRVTEIDIVPSKVNFCPKQYADFAIGP
GRNDVALPFALKKGDTISFSVIGSKVCKDKESETKIRYLKIDEKCSEQETEHFAHVLNQEKCQGGKDGICPNKYIIGDAQ
WLSGREYWFSKLDQDERKKEIENIINSIKQGENIDCSKLSESSASKIDTHILNSLCRRICKFSSGRRGEDCVYIEYNNIE
IELFNALNSSGESVVAEIISNVLKGKQVKTDITFLKVGMDNETLEHIPGGGLCTSCDHKMENDHQIPSLTFSLCSRNDKS
CYNTNDKGGFNIRVTKNHSLENSLYISVSDKFPEHKPGENQADISVDISKVHDMENLKGKLKDKTGTIYYGIRDHGCDYK
NEGQFSINLTTQEPPTKTFSAIYNFFDEKVKTAFFGSNYKDPNAIHSDTSPVKSLYESFIKSSRTNTIRSTIISLLVLYI
ILYTLYYFFGLTHISIYEFLIICVKIGIIAQLLQDNSWDFFYNNAFSIFINTPKQLIEIANFRGTTSNVFEFLDLPLNRF
LSSHSVLLIVSLIFSGPLGIVSFCLVIWGLITVSLSIFNALFSFITSIAIVALLLSLAPIFIICLLFAYTRQMFQNWVKN
LARFAIHPVVLLIFISLISQVMDYIVYSVFDFEVCSTCILNINLKIFNPCIFYGYASKYTPNITAMMAFVILGHAMKALV
EASSAISDSLFGAYVASEPGRQYQQSLMGTVGLDEQSVQRRERGDASQQSGTSRPQIPQGTQRSTPQIPQPGRQQ

Specific function: Unknown

COG id: COG3704

COG function: function code U; Type IV secretory pathway, VirB6 components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbL/virB6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007688 [H]

Pfam domain/function: PF04610 TrbL [H]

EC number: NA

Molecular weight: Translated: 89522; Mature: 89522

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKFLLIIPFFFLSGCGEHHCIKPENLSGLREKLDIVSTEQKWVDSGVNISDRIRVTEID
CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEEEEE
IVPSKVNFCPKQYADFAIGPGRNDVALPFALKKGDTISFSVIGSKVCKDKESETKIRYLK
EECCHHHCCHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEHHHHHHCCCCCCCEEEEEE
IDEKCSEQETEHFAHVLNQEKCQGGKDGICPNKYIIGDAQWLSGREYWFSKLDQDERKKE
ECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHCCHHHHHHHCCHHHHHHH
IENIINSIKQGENIDCSKLSESSASKIDTHILNSLCRRICKFSSGRRGEDCVYIEYNNIE
HHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEE
IELFNALNSSGESVVAEIISNVLKGKQVKTDITFLKVGMDNETLEHIPGGGLCTSCDHKM
EEEEHHHCCCCHHHHHHHHHHHHCCCCEEECEEEEEECCCCCHHHHCCCCCCCCCCCCCC
ENDHQIPSLTFSLCSRNDKSCYNTNDKGGFNIRVTKNHSLENSLYISVSDKFPEHKPGEN
CCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCC
QADISVDISKVHDMENLKGKLKDKTGTIYYGIRDHGCDYKNEGQFSINLTTQEPPTKTFS
CCCEEEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHH
AIYNFFDEKVKTAFFGSNYKDPNAIHSDTSPVKSLYESFIKSSRTNTIRSTIISLLVLYI
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ILYTLYYFFGLTHISIYEFLIICVKIGIIAQLLQDNSWDFFYNNAFSIFINTPKQLIEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEEECCHHHHHHHH
NFRGTTSNVFEFLDLPLNRFLSSHSVLLIVSLIFSGPLGIVSFCLVIWGLITVSLSIFNA
HCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LFSFITSIAIVALLLSLAPIFIICLLFAYTRQMFQNWVKNLARFAIHPVVLLIFISLISQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMDYIVYSVFDFEVCSTCILNINLKIFNPCIFYGYASKYTPNITAMMAFVILGHAMKALV
HHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
EASSAISDSLFGAYVASEPGRQYQQSLMGTVGLDEQSVQRRERGDASQQSGTSRPQIPQG
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHCCCCCCCCCCC
TQRSTPQIPQPGRQQ
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MLKFLLIIPFFFLSGCGEHHCIKPENLSGLREKLDIVSTEQKWVDSGVNISDRIRVTEID
CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEEEEE
IVPSKVNFCPKQYADFAIGPGRNDVALPFALKKGDTISFSVIGSKVCKDKESETKIRYLK
EECCHHHCCHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEHHHHHHCCCCCCCEEEEEE
IDEKCSEQETEHFAHVLNQEKCQGGKDGICPNKYIIGDAQWLSGREYWFSKLDQDERKKE
ECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHCCHHHHHHHCCHHHHHHH
IENIINSIKQGENIDCSKLSESSASKIDTHILNSLCRRICKFSSGRRGEDCVYIEYNNIE
HHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEE
IELFNALNSSGESVVAEIISNVLKGKQVKTDITFLKVGMDNETLEHIPGGGLCTSCDHKM
EEEEHHHCCCCHHHHHHHHHHHHCCCCEEECEEEEEECCCCCHHHHCCCCCCCCCCCCCC
ENDHQIPSLTFSLCSRNDKSCYNTNDKGGFNIRVTKNHSLENSLYISVSDKFPEHKPGEN
CCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCC
QADISVDISKVHDMENLKGKLKDKTGTIYYGIRDHGCDYKNEGQFSINLTTQEPPTKTFS
CCCEEEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHH
AIYNFFDEKVKTAFFGSNYKDPNAIHSDTSPVKSLYESFIKSSRTNTIRSTIISLLVLYI
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ILYTLYYFFGLTHISIYEFLIICVKIGIIAQLLQDNSWDFFYNNAFSIFINTPKQLIEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEEECCHHHHHHHH
NFRGTTSNVFEFLDLPLNRFLSSHSVLLIVSLIFSGPLGIVSFCLVIWGLITVSLSIFNA
HCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LFSFITSIAIVALLLSLAPIFIICLLFAYTRQMFQNWVKNLARFAIHPVVLLIFISLISQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMDYIVYSVFDFEVCSTCILNINLKIFNPCIFYGYASKYTPNITAMMAFVILGHAMKALV
HHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
EASSAISDSLFGAYVASEPGRQYQQSLMGTVGLDEQSVQRRERGDASQQSGTSRPQIPQG
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHCCCCCCCCCCC
TQRSTPQIPQPGRQQ
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA