| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
Click here to switch to the map view.
The map label for this gene is 225630509
Identifier: 225630509
GI number: 225630509
Start: 824666
End: 825166
Strand: Reverse
Name: 225630509
Synonym: WRi_007600
Alternate gene names: NA
Gene position: 825166-824666 (Counterclockwise)
Preceding gene: 225630510
Following gene: 225630508
Centisome position: 57.07
GC content: 36.93
Gene sequence:
>501_bases ATGTTAGAAGACCTGTTAACTGACTTTAACACTGTAAAACCGCAAAGTAGATTAATACCAAAATGTACAATAGTAAAGGT AAAAATGACAATCAAGCCTGGAGGTTATGAAAATTGGTTTACTAAAAGCTATGCTACCGGCAGCATCTATTTAAACGCTG AATTTATTGTCACTGAAGGTCCATACGCAAAACGCAAGATTTTTCAAGTAATTGGTATTAAAAGTGGCAAAGCAAGCGTT GAAGGAGATACTTGGGGAGAATCTGGTCGTTCCATGCTTAGAAGTATTTTGGAGTCAGCACGAAATATTCATGCACATGA CACTTCAGAGAAAGCAGTTATTGCTAGAAAAATCAACTCTATAGCTGATTTTAACGGGTTAGAGTTTACTGCAAAAGTTG GTATTGAAGCTGATAGTAGATACGGAGACAGGAACAGAATTACTGCAGTTGTTACTCCAGAACAAAACAATAGCATTGAA TCTGATTGGGTCCCGTTTTGA
Upstream 100 bases:
>100_bases ACCGCAGTGGACGCCTGAGTATGGTTGAAGAACCGCATTTAGGCAAGCTGCTTACAAAGATTAAAAGCAAGTTTTAAAAT TTAAACATGGAGAATGATAT
Downstream 100 bases:
>100_bases AGTACGACGAGGAAAAGCTTTGGTCTGCTGTCGTTACTAGAGGTATTCAGGACGCAGTAGGAAAAAACCCAAAGCTAAGA GAAGAAGCAATTAATTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MLEDLLTDFNTVKPQSRLIPKCTIVKVKMTIKPGGYENWFTKSYATGSIYLNAEFIVTEGPYAKRKIFQVIGIKSGKASV EGDTWGESGRSMLRSILESARNIHAHDTSEKAVIARKINSIADFNGLEFTAKVGIEADSRYGDRNRITAVVTPEQNNSIE SDWVPF
Sequences:
>Translated_166_residues MLEDLLTDFNTVKPQSRLIPKCTIVKVKMTIKPGGYENWFTKSYATGSIYLNAEFIVTEGPYAKRKIFQVIGIKSGKASV EGDTWGESGRSMLRSILESARNIHAHDTSEKAVIARKINSIADFNGLEFTAKVGIEADSRYGDRNRITAVVTPEQNNSIE SDWVPF >Mature_166_residues MLEDLLTDFNTVKPQSRLIPKCTIVKVKMTIKPGGYENWFTKSYATGSIYLNAEFIVTEGPYAKRKIFQVIGIKSGKASV EGDTWGESGRSMLRSILESARNIHAHDTSEKAVIARKINSIADFNGLEFTAKVGIEADSRYGDRNRITAVVTPEQNNSIE SDWVPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18506; Mature: 18506
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEDLLTDFNTVKPQSRLIPKCTIVKVKMTIKPGGYENWFTKSYATGSIYLNAEFIVTEG CCHHHHHHHHCCCCHHHCCCEEEEEEEEEEECCCCCCCCEECCCCCCEEEEEEEEEEECC PYAKRKIFQVIGIKSGKASVEGDTWGESGRSMLRSILESARNIHAHDTSEKAVIARKINS CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH IADFNGLEFTAKVGIEADSRYGDRNRITAVVTPEQNNSIESDWVPF HHCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MLEDLLTDFNTVKPQSRLIPKCTIVKVKMTIKPGGYENWFTKSYATGSIYLNAEFIVTEG CCHHHHHHHHCCCCHHHCCCEEEEEEEEEEECCCCCCCCEECCCCCCEEEEEEEEEEECC PYAKRKIFQVIGIKSGKASVEGDTWGESGRSMLRSILESARNIHAHDTSEKAVIARKINS CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH IADFNGLEFTAKVGIEADSRYGDRNRITAVVTPEQNNSIESDWVPF HHCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA