| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630508
Identifier: 225630508
GI number: 225630508
Start: 823443
End: 824669
Strand: Reverse
Name: 225630508
Synonym: WRi_007590
Alternate gene names: NA
Gene position: 824669-823443 (Counterclockwise)
Preceding gene: 225630509
Following gene: 225630507
Centisome position: 57.04
GC content: 34.72
Gene sequence:
>1227_bases TTGAAGTACGACGAGGAAAAGCTTTGGTCTGCTGTCGTTACTAGAGGTATTCAGGACGCAGTAGGAAAAAACCCAAAGCT AAGAGAAGAAGCAATTAATTGGCTGAATTCAAAATCTTTTGAAACTGTTTGTGAGCTAGCTAATCTCAACTTTACACGTA TGAAAAATATGTATGGGAGTTTTATGTCTAAAAAGCAAGAAAAGATAAAAGCATTATTAATTGATAATATCAAAGAGTGT GTTTCTTACCTACTTCCAAATGGTGAGTTTTACCGAGATAAAACTTATATTGGAAACTTAAATGGAAATACAATTACAGT TAAAATAGTAGGTAAGGAAGCTGGTGATTGGCGTAATTTTACTGAAGGAACTGGTGGTGATATTATTGATCTTTGGATTT TAATTAAGGGTGATATATATTCTGCTAGAAAGTGGCTCAATAAAAAATCAAAGAGTGGAGAAAAAAAAGGGGGGAAAAGA GAAGAAAAAATATTTTCTGTAAAGCAGTACTTGAGTGATCAATCACCAATACCAGAAGACATAATAGCTCCACGAATTCT CACTCCAGGTGGTCTTTTAGTCATTGGTGGTACTCCAAAGGTTGGCAAAAGTTATTTTCTTCTCTCTTTGCTTGCACATC TTGCAGCAGGAGTGTCGTTTCTTAAGATGAAATCAGCAAGGCCACTAAAAATAATCTATCTGCAAAATGAGATGGAGTAC AATTACATCAGGGAACGAATACAACAAATCATAACCAATCAAAGGCTGCCAAATCTAGCAGAAGAAAACTTGATTGTTAC TACAAAGATGAGATTAACTTTAAACGATGAAGGTATAGAGAGAATAAAAGAGATCATAGGAGAAAAATTTAAAACAATAG ACCTTATCGTCTTGGATTCTCTTGACTATGAAAATATGTTTTCTGGCCTGCAAAGCAGAGTAGAAAAACTACGTTCTATA ATTAATCCTATGGCTGGAATCATTATTACACGTCACACCAGAAAAGTATCGACAGCTACACTCGCAAAAAGCCCTTTTCA AGCTTTAATTGGTGCTAATGCTTTAAGAAGCTTTTATACATCTGGTATGGTAATGTTTCAACCAAGTAAACGTGCAAATG TCTTGCAAGTAGTATATGAACTAAGAAACGGTAAATCAATACCAGCAAAATTCATTAGCAGGGTAAATGGGCGTTGGCAG AATTCTAAAATTATAGCTACGGCTTAA
Upstream 100 bases:
>100_bases TTGGTATTGAAGCTGATAGTAGATACGGAGACAGGAACAGAATTACTGCAGTTGTTACTCCAGAACAAAACAATAGCATT GAATCTGATTGGGTCCCGTT
Downstream 100 bases:
>100_bases CTTGTCCGCAAAAAACGGATACTATGGTAGAGCTAAAGACTCAGCTTTTGCAAAATATCAGATCTTGTCTTTTTCATCTA CTACCAAGAGGGACATTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Regulatory Protein RepA; Bacteriophage-Related Protein
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MKYDEEKLWSAVVTRGIQDAVGKNPKLREEAINWLNSKSFETVCELANLNFTRMKNMYGSFMSKKQEKIKALLIDNIKEC VSYLLPNGEFYRDKTYIGNLNGNTITVKIVGKEAGDWRNFTEGTGGDIIDLWILIKGDIYSARKWLNKKSKSGEKKGGKR EEKIFSVKQYLSDQSPIPEDIIAPRILTPGGLLVIGGTPKVGKSYFLLSLLAHLAAGVSFLKMKSARPLKIIYLQNEMEY NYIRERIQQIITNQRLPNLAEENLIVTTKMRLTLNDEGIERIKEIIGEKFKTIDLIVLDSLDYENMFSGLQSRVEKLRSI INPMAGIIITRHTRKVSTATLAKSPFQALIGANALRSFYTSGMVMFQPSKRANVLQVVYELRNGKSIPAKFISRVNGRWQ NSKIIATA
Sequences:
>Translated_408_residues MKYDEEKLWSAVVTRGIQDAVGKNPKLREEAINWLNSKSFETVCELANLNFTRMKNMYGSFMSKKQEKIKALLIDNIKEC VSYLLPNGEFYRDKTYIGNLNGNTITVKIVGKEAGDWRNFTEGTGGDIIDLWILIKGDIYSARKWLNKKSKSGEKKGGKR EEKIFSVKQYLSDQSPIPEDIIAPRILTPGGLLVIGGTPKVGKSYFLLSLLAHLAAGVSFLKMKSARPLKIIYLQNEMEY NYIRERIQQIITNQRLPNLAEENLIVTTKMRLTLNDEGIERIKEIIGEKFKTIDLIVLDSLDYENMFSGLQSRVEKLRSI INPMAGIIITRHTRKVSTATLAKSPFQALIGANALRSFYTSGMVMFQPSKRANVLQVVYELRNGKSIPAKFISRVNGRWQ NSKIIATA >Mature_408_residues MKYDEEKLWSAVVTRGIQDAVGKNPKLREEAINWLNSKSFETVCELANLNFTRMKNMYGSFMSKKQEKIKALLIDNIKEC VSYLLPNGEFYRDKTYIGNLNGNTITVKIVGKEAGDWRNFTEGTGGDIIDLWILIKGDIYSARKWLNKKSKSGEKKGGKR EEKIFSVKQYLSDQSPIPEDIIAPRILTPGGLLVIGGTPKVGKSYFLLSLLAHLAAGVSFLKMKSARPLKIIYLQNEMEY NYIRERIQQIITNQRLPNLAEENLIVTTKMRLTLNDEGIERIKEIIGEKFKTIDLIVLDSLDYENMFSGLQSRVEKLRSI INPMAGIIITRHTRKVSTATLAKSPFQALIGANALRSFYTSGMVMFQPSKRANVLQVVYELRNGKSIPAKFISRVNGRWQ NSKIIATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46229; Mature: 46229
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYDEEKLWSAVVTRGIQDAVGKNPKLREEAINWLNSKSFETVCELANLNFTRMKNMYGS CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHH FMSKKQEKIKALLIDNIKECVSYLLPNGEFYRDKTYIGNLNGNTITVKIVGKEAGDWRNF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEECCCCCEEEEEEEECCCCCCCCC TEGTGGDIIDLWILIKGDIYSARKWLNKKSKSGEKKGGKREEKIFSVKQYLSDQSPIPED CCCCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHH IIAPRILTPGGLLVIGGTPKVGKSYFLLSLLAHLAAGVSFLKMKSARPLKIIYLQNEMEY HCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEEEECCCCH NYIRERIQQIITNQRLPNLAEENLIVTTKMRLTLNDEGIERIKEIIGEKFKTIDLIVLDS HHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHHHCCHHCEEEEEEECC LDYENMFSGLQSRVEKLRSIINPMAGIIITRHTRKVSTATLAKSPFQALIGANALRSFYT CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH SGMVMFQPSKRANVLQVVYELRNGKSIPAKFISRVNGRWQNSKIIATA CCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEC >Mature Secondary Structure MKYDEEKLWSAVVTRGIQDAVGKNPKLREEAINWLNSKSFETVCELANLNFTRMKNMYGS CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHH FMSKKQEKIKALLIDNIKECVSYLLPNGEFYRDKTYIGNLNGNTITVKIVGKEAGDWRNF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEECCCCCEEEEEEEECCCCCCCCC TEGTGGDIIDLWILIKGDIYSARKWLNKKSKSGEKKGGKREEKIFSVKQYLSDQSPIPED CCCCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHH IIAPRILTPGGLLVIGGTPKVGKSYFLLSLLAHLAAGVSFLKMKSARPLKIIYLQNEMEY HCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEEEECCCCH NYIRERIQQIITNQRLPNLAEENLIVTTKMRLTLNDEGIERIKEIIGEKFKTIDLIVLDS HHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHHHCCHHCEEEEEEECC LDYENMFSGLQSRVEKLRSIINPMAGIIITRHTRKVSTATLAKSPFQALIGANALRSFYT CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH SGMVMFQPSKRANVLQVVYELRNGKSIPAKFISRVNGRWQNSKIIATA CCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA