| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
Click here to switch to the map view.
The map label for this gene is 225630462
Identifier: 225630462
GI number: 225630462
Start: 770033
End: 770830
Strand: Reverse
Name: 225630462
Synonym: WRi_007080
Alternate gene names: NA
Gene position: 770830-770033 (Counterclockwise)
Preceding gene: 225630463
Following gene: 225630461
Centisome position: 53.31
GC content: 38.22
Gene sequence:
>798_bases ATGAAAACACCAAATATTGTCGAAACATTAAAATTTGAGGAAATCTTTTCGCGAATGAAAGAAGAGTTAGTGCGTCGGAA TGCAAGTTTTTCTGCACTAACTGAGAGTGATCCAGCAATAAAGATACTGGAAGTAGCAGCCTGGCGTGAACTTTTGCTTA GGCAAAGGATTAATGATGCAGCACAGGCAAATTTACTTGCTTTTGCAAGAGGTAATGACCTTGATCACTTGGCTGAATTT TATGGTGTGCTGAGAAAGGAGTCAGAGAATGATGAATCCTTAAGGAAGCGGGTAAAAGCCAAAATTGTTGGTTGGTCAAC AGCAGGGAGTAAAGAGCATTATCGCTATCATGCATTATCTGCTGACACGAGAGTAAAAGATGCGCAAGTGGTATCACCTA TACCAGGAAGTGTACAGATTTCAATACTTTCCACAGAAAATGATGGAGTACCTTCAGAAGAATTGCTAGAGATCGTCAGA AATCACGTTATTCGTGATGATATTCGTGTATTAACAGATACGCTTACAGTTATTGGCTGTGGTATTATTCCCATTACTAT TCATGCTAAAGTGCATATTTACCCTACTGCATCAAAAGATGTTATCGAAGCTGTAAAGGAACAATTTATCAAAGATCTTG AATCTGCTAAAGGTTTAGGGTGGAATGTTACCAGATCATGGATTATTGCCCACCTCTTTATAGAAGGTATGCAGAATATA GAGCTTACAGAGCCGATAGAAGACATCGTCGTGCAAGATAATGAATGCGTTACTTTAAATAATTTAAGTGTTAGGTAA
Upstream 100 bases:
>100_bases AGAAATAAAAGAAGGTAAAGTAACTCTCATTTTAGAGGGAATCTATCTGCCAAATGGAAAGCTGATCCGCCTTGATGGTA TTATAGTATAAGGTAGTAGG
Downstream 100 bases:
>100_bases AAATTGGTGATACTTCCTCCAAATGCTTCAAAGCAAGAGCAAATACTTACAGACATAATTAATTATTCTCTTGATGCAAA TTCTCTACGGGGATTTAAAT
Product: baseplate assembly protein J, putative
Products: NA
Alternate protein names: Baseplate Assembly Protein J; Baseplate J-Like Protein; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Bacteriophage Baseplate Assembly Protein; Phage Baseplate Assembly Protein J; Pyocin R2_PP Baseplate/Tail Fiber Protein; Phage Protein Gp; Bacteriophage Baseplate Assembly Protein J; Phage Baseplate J-Like Protein; Prophage LambdaW5 Baseplate Assembly Protein J; Baseplate Assembly-Like Protein; Phage Baseplate Assembly; Prophage; GPJ Of Phage P2-Like; Phage P2 Baseplate Assembly Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly GpJ-Like Protein; Prophage Baseplate Assembly Protein; Bacteriophage Tail Fiber Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Baseplate Assembly Protein GpJ; Baseplate Assembly Protein J Prophage; Baseplate Assembly Protein; Bacteriophage Baseplate Protein; Baseplate Protein Putative Phage Associated Protein; Prophage LambdaW1 Baseplate Assembly Protein J; Phage Tail Protein; Phage Baseplate Protein
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MKTPNIVETLKFEEIFSRMKEELVRRNASFSALTESDPAIKILEVAAWRELLLRQRINDAAQANLLAFARGNDLDHLAEF YGVLRKESENDESLRKRVKAKIVGWSTAGSKEHYRYHALSADTRVKDAQVVSPIPGSVQISILSTENDGVPSEELLEIVR NHVIRDDIRVLTDTLTVIGCGIIPITIHAKVHIYPTASKDVIEAVKEQFIKDLESAKGLGWNVTRSWIIAHLFIEGMQNI ELTEPIEDIVVQDNECVTLNNLSVR
Sequences:
>Translated_265_residues MKTPNIVETLKFEEIFSRMKEELVRRNASFSALTESDPAIKILEVAAWRELLLRQRINDAAQANLLAFARGNDLDHLAEF YGVLRKESENDESLRKRVKAKIVGWSTAGSKEHYRYHALSADTRVKDAQVVSPIPGSVQISILSTENDGVPSEELLEIVR NHVIRDDIRVLTDTLTVIGCGIIPITIHAKVHIYPTASKDVIEAVKEQFIKDLESAKGLGWNVTRSWIIAHLFIEGMQNI ELTEPIEDIVVQDNECVTLNNLSVR >Mature_265_residues MKTPNIVETLKFEEIFSRMKEELVRRNASFSALTESDPAIKILEVAAWRELLLRQRINDAAQANLLAFARGNDLDHLAEF YGVLRKESENDESLRKRVKAKIVGWSTAGSKEHYRYHALSADTRVKDAQVVSPIPGSVQISILSTENDGVPSEELLEIVR NHVIRDDIRVLTDTLTVIGCGIIPITIHAKVHIYPTASKDVIEAVKEQFIKDLESAKGLGWNVTRSWIIAHLFIEGMQNI ELTEPIEDIVVQDNECVTLNNLSVR
Specific function: Unknown
COG id: COG3948
COG function: function code R; Phage-related baseplate assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29850; Mature: 29850
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPNIVETLKFEEIFSRMKEELVRRNASFSALTESDPAIKILEVAAWRELLLRQRINDA CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCHH AQANLLAFARGNDLDHLAEFYGVLRKESENDESLRKRVKAKIVGWSTAGSKEHYRYHALS HHHCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCCCCCCCEEEEEEC ADTRVKDAQVVSPIPGSVQISILSTENDGVPSEELLEIVRNHVIRDDIRVLTDTLTVIGC CCCCCCCCEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GIIPITIHAKVHIYPTASKDVIEAVKEQFIKDLESAKGLGWNVTRSWIIAHLFIEGMQNI CEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC ELTEPIEDIVVQDNECVTLNNLSVR CCCCCHHHHHCCCCCEEEECCCCCC >Mature Secondary Structure MKTPNIVETLKFEEIFSRMKEELVRRNASFSALTESDPAIKILEVAAWRELLLRQRINDA CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCHH AQANLLAFARGNDLDHLAEFYGVLRKESENDESLRKRVKAKIVGWSTAGSKEHYRYHALS HHHCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCCCCCCCEEEEEEC ADTRVKDAQVVSPIPGSVQISILSTENDGVPSEELLEIVRNHVIRDDIRVLTDTLTVIGC CCCCCCCCEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GIIPITIHAKVHIYPTASKDVIEAVKEQFIKDLESAKGLGWNVTRSWIIAHLFIEGMQNI CEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC ELTEPIEDIVVQDNECVTLNNLSVR CCCCCHHHHHCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA