| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630461
Identifier: 225630461
GI number: 225630461
Start: 768809
End: 770026
Strand: Reverse
Name: 225630461
Synonym: WRi_007070
Alternate gene names: NA
Gene position: 770026-768809 (Counterclockwise)
Preceding gene: 225630462
Following gene: 225630460
Centisome position: 53.26
GC content: 35.22
Gene sequence:
>1218_bases GTGATACTTCCTCCAAATGCTTCAAAGCAAGAGCAAATACTTACAGACATAATTAATTATTCTCTTGATGCAAATTCTCT ACGGGGATTTAAATTTAACCCACAGACTGAAATGTTGCCGTGGCTAGTAGCGGAATACGGCTTGGGAGAAATTTTATCCT GGGGTAAGAAAGCTACTAAGAGTGCATTAAAAGAATGGGTCTTAGCTAAACAAAACGGAATAAGATTTCAACGTTTGCGC GGTACACCACAGTCACTGAAGATGGCGCTGAAATGGGCAAACATTGATAATATTACCATTCAAGAAGAACCACCAGGAGA GCATTTTGCTGAATTTCAAATTGGCATCTCTGATGTTCCTAATGATTTTTTTGTCGATAGTGTAATTGCTCTGGCAAAAC TTTCTGCACCGGCAAGATCTCGATTAATGCGAATATTCAATGACTATTACAATGCTCAGCGGTTTATGTTAGATGAAAGT ATTTTTGGAGATCTTCTTTCAGACTACTCGGGTGTAAGAATAGCAAAAGAAGGGCCAGTATTATCGTTTGGAAGAAAAAA CTCATTTGAGCTAAAAATAGGAAATCCAAGATTTAAATTTAGCACTTTTAGATCACATTATGATAGAAGTTACAGTAATG ATTTATATAGGTTGGATGTTGCAGTATTAGGAGAGACAGAGCCTCACACCAAGAATTACAACGGTATATATGAAAGAAGT CACGAGTGGTATAACTTAAAAGCACTATATCCTCTACCACAGGGTTTATTGCCAGAAATTAAGTTTGCTAAAGCGTTGAT AGTATTATCAGATAGTTGGAATTTGGGAGATATCAATGCTTGTTTTGCACCAACTGCTTATAAAGAAATAGAGCATACAT TTTACTTAAGTGAAGATAAACTCTCTGAGCAGATTTGGAATTTTCGACGTACACCAATTTTAGAGCGGTTTAGTATAACT TATTACTACGAAGCAAAGAGTTTTACTGATCAAAGAATAATAGAGTCTAATTTAAGGGAATATCATATTGATTGTCAAAA TGACTCAGATTTAAAACAGAAAGATCCTATTCATGAGCTAGAAAATTACGTAGCAGTATTTTACCCAGGTATGGTCACTT GGCATGAACATCGCCACTTAAATCGCCCTTGGAAAAATTTTGAGCCCATTATTACAAAAAAATTGGACGTTTTTTCTACG AATCTTGTATATATATAA
Upstream 100 bases:
>100_bases AGGTATGCAGAATATAGAGCTTACAGAGCCGATAGAAGACATCGTCGTGCAAGATAATGAATGCGTTACTTTAAATAATT TAAGTGTTAGGTAAAAATTG
Downstream 100 bases:
>100_bases TATCAATCACGCAATCAGACATGTCAATACTGACACAATCAGGCAGAGCAGCTATTGCTGCGAGCATAAAAGAGCAACCA ATACATCTTGCTTGGGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MILPPNASKQEQILTDIINYSLDANSLRGFKFNPQTEMLPWLVAEYGLGEILSWGKKATKSALKEWVLAKQNGIRFQRLR GTPQSLKMALKWANIDNITIQEEPPGEHFAEFQIGISDVPNDFFVDSVIALAKLSAPARSRLMRIFNDYYNAQRFMLDES IFGDLLSDYSGVRIAKEGPVLSFGRKNSFELKIGNPRFKFSTFRSHYDRSYSNDLYRLDVAVLGETEPHTKNYNGIYERS HEWYNLKALYPLPQGLLPEIKFAKALIVLSDSWNLGDINACFAPTAYKEIEHTFYLSEDKLSEQIWNFRRTPILERFSIT YYYEAKSFTDQRIIESNLREYHIDCQNDSDLKQKDPIHELENYVAVFYPGMVTWHEHRHLNRPWKNFEPIITKKLDVFST NLVYI
Sequences:
>Translated_405_residues MILPPNASKQEQILTDIINYSLDANSLRGFKFNPQTEMLPWLVAEYGLGEILSWGKKATKSALKEWVLAKQNGIRFQRLR GTPQSLKMALKWANIDNITIQEEPPGEHFAEFQIGISDVPNDFFVDSVIALAKLSAPARSRLMRIFNDYYNAQRFMLDES IFGDLLSDYSGVRIAKEGPVLSFGRKNSFELKIGNPRFKFSTFRSHYDRSYSNDLYRLDVAVLGETEPHTKNYNGIYERS HEWYNLKALYPLPQGLLPEIKFAKALIVLSDSWNLGDINACFAPTAYKEIEHTFYLSEDKLSEQIWNFRRTPILERFSIT YYYEAKSFTDQRIIESNLREYHIDCQNDSDLKQKDPIHELENYVAVFYPGMVTWHEHRHLNRPWKNFEPIITKKLDVFST NLVYI >Mature_405_residues MILPPNASKQEQILTDIINYSLDANSLRGFKFNPQTEMLPWLVAEYGLGEILSWGKKATKSALKEWVLAKQNGIRFQRLR GTPQSLKMALKWANIDNITIQEEPPGEHFAEFQIGISDVPNDFFVDSVIALAKLSAPARSRLMRIFNDYYNAQRFMLDES IFGDLLSDYSGVRIAKEGPVLSFGRKNSFELKIGNPRFKFSTFRSHYDRSYSNDLYRLDVAVLGETEPHTKNYNGIYERS HEWYNLKALYPLPQGLLPEIKFAKALIVLSDSWNLGDINACFAPTAYKEIEHTFYLSEDKLSEQIWNFRRTPILERFSIT YYYEAKSFTDQRIIESNLREYHIDCQNDSDLKQKDPIHELENYVAVFYPGMVTWHEHRHLNRPWKNFEPIITKKLDVFST NLVYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47259; Mature: 47259
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILPPNASKQEQILTDIINYSLDANSLRGFKFNPQTEMLPWLVAEYGLGEILSWGKKATK CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHH SALKEWVLAKQNGIRFQRLRGTPQSLKMALKWANIDNITIQEEPPGEHFAEFQIGISDVP HHHHHHHHHHCCCCEEEECCCCHHHHHHHHEECCCCCEEEECCCCCCCHHEEEECCCCCC NDFFVDSVIALAKLSAPARSRLMRIFNDYYNAQRFMLDESIFGDLLSDYSGVRIAKEGPV CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCE LSFGRKNSFELKIGNPRFKFSTFRSHYDRSYSNDLYRLDVAVLGETEPHTKNYNGIYERS EECCCCCCEEEEECCCCEEHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHCC HEWYNLKALYPLPQGLLPEIKFAKALIVLSDSWNLGDINACFAPTAYKEIEHTFYLSEDK CCEEEEEEECCCCCCCCCHHHHEEEEEEEECCCCCCCCCHHCCCHHHHHHHHHEEECHHH LSEQIWNFRRTPILERFSITYYYEAKSFTDQRIIESNLREYHIDCQNDSDLKQKDPIHEL HHHHHHCCCCCCCCHHEEEEEEEECCCCCHHHHHHHCCCEEEECCCCCCCCCCCCCHHHH ENYVAVFYPGMVTWHEHRHLNRPWKNFEPIITKKLDVFSTNLVYI HCEEEEEECCEEEEHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEC >Mature Secondary Structure MILPPNASKQEQILTDIINYSLDANSLRGFKFNPQTEMLPWLVAEYGLGEILSWGKKATK CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHH SALKEWVLAKQNGIRFQRLRGTPQSLKMALKWANIDNITIQEEPPGEHFAEFQIGISDVP HHHHHHHHHHCCCCEEEECCCCHHHHHHHHEECCCCCEEEECCCCCCCHHEEEECCCCCC NDFFVDSVIALAKLSAPARSRLMRIFNDYYNAQRFMLDESIFGDLLSDYSGVRIAKEGPV CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCE LSFGRKNSFELKIGNPRFKFSTFRSHYDRSYSNDLYRLDVAVLGETEPHTKNYNGIYERS EECCCCCCEEEEECCCCEEHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHCC HEWYNLKALYPLPQGLLPEIKFAKALIVLSDSWNLGDINACFAPTAYKEIEHTFYLSEDK CCEEEEEEECCCCCCCCCHHHHEEEEEEEECCCCCCCCCHHCCCHHHHHHHHHEEECHHH LSEQIWNFRRTPILERFSITYYYEAKSFTDQRIIESNLREYHIDCQNDSDLKQKDPIHEL HHHHHHCCCCCCCCHHEEEEEEEECCCCCHHHHHHHCCCEEEECCCCCCCCCCCCCHHHH ENYVAVFYPGMVTWHEHRHLNRPWKNFEPIITKKLDVFSTNLVYI HCEEEEEECCEEEEHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA