| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630406
Identifier: 225630406
GI number: 225630406
Start: 687496
End: 688098
Strand: Reverse
Name: 225630406
Synonym: WRi_006370
Alternate gene names: NA
Gene position: 688098-687496 (Counterclockwise)
Preceding gene: 225630408
Following gene: 225630405
Centisome position: 47.59
GC content: 32.17
Gene sequence:
>603_bases ATGGGAGATGCTTTTTTGATGTCAATGGAATCTTCTAAGGGCAATAACGATAGAAATAAACAGTTTCTAGTGCAAATAGT TGCTTGGTTAGTAGACAACACTGGTTTAACTTTTAATCAAATAGCACAATGTTGCAGATTGGCCCTTGAAGAAGTACAAG ACATAGCTGATGAGGAAATAGAAGTAGAAAAATATAACCCTATTATTTCTGGAATAATTACTGAAAAAGAAATCGATGAT TGCAAAAAAAATCCAAATCGTGTACCAAATTTGATTATAAAAAATATAAAAAAAAGGAGTAAAGCGATTGGTAGCATTCT TGGCTTTGCCTCTACGGCAAGACGTAGAGATAAACCTGATGCGATTTATTATTTAGTAAAAAAATTTCCTATCTTGGACA ATAACGTTATAGCTAAATTAATTAGTACAACAAATTACACAGTTGAGCAGGTAAGAGATGGATCTCATCATAACATGCAA AATATAAAACCCCAAGATCCTGTACTACTCGGCTTATGTAGTCAAGAAAATTTAGAAGCAGAAGTGGAAAAAGCAAAAGT AGAAGAGGAGAAGCAAGAAAGGTTAAAAAAATATAAAGAATAG
Upstream 100 bases:
>100_bases GGGAAGTGACAAACAAAAAGTTATTGAATGACAAAATTAATGCTTTTTTAGTTTTAATAGCTTATATTTTAGCTCTGTAT AACAGTAATGGATACTTTAA
Downstream 100 bases:
>100_bases CTATTGAAAATCCTCAAATTTTTGTGCTTTGTTAACATTAAATTAACTTGACTTGCTAGTGTTTATTAGTATAATGTAAG TAAAGTACGGGGTTTAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MGDAFLMSMESSKGNNDRNKQFLVQIVAWLVDNTGLTFNQIAQCCRLALEEVQDIADEEIEVEKYNPIISGIITEKEIDD CKKNPNRVPNLIIKNIKKRSKAIGSILGFASTARRRDKPDAIYYLVKKFPILDNNVIAKLISTTNYTVEQVRDGSHHNMQ NIKPQDPVLLGLCSQENLEAEVEKAKVEEEKQERLKKYKE
Sequences:
>Translated_200_residues MGDAFLMSMESSKGNNDRNKQFLVQIVAWLVDNTGLTFNQIAQCCRLALEEVQDIADEEIEVEKYNPIISGIITEKEIDD CKKNPNRVPNLIIKNIKKRSKAIGSILGFASTARRRDKPDAIYYLVKKFPILDNNVIAKLISTTNYTVEQVRDGSHHNMQ NIKPQDPVLLGLCSQENLEAEVEKAKVEEEKQERLKKYKE >Mature_199_residues GDAFLMSMESSKGNNDRNKQFLVQIVAWLVDNTGLTFNQIAQCCRLALEEVQDIADEEIEVEKYNPIISGIITEKEIDDC KKNPNRVPNLIIKNIKKRSKAIGSILGFASTARRRDKPDAIYYLVKKFPILDNNVIAKLISTTNYTVEQVRDGSHHNMQN IKPQDPVLLGLCSQENLEAEVEKAKVEEEKQERLKKYKE
Specific function: Unknown
COG id: COG3820
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22823; Mature: 22692
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDAFLMSMESSKGNNDRNKQFLVQIVAWLVDNTGLTFNQIAQCCRLALEEVQDIADEEI CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC EVEKYNPIISGIITEKEIDDCKKNPNRVPNLIIKNIKKRSKAIGSILGFASTARRRDKPD HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH AIYYLVKKFPILDNNVIAKLISTTNYTVEQVRDGSHHNMQNIKPQDPVLLGLCSQENLEA HHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHH EVEKAKVEEEKQERLKKYKE HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GDAFLMSMESSKGNNDRNKQFLVQIVAWLVDNTGLTFNQIAQCCRLALEEVQDIADEEI CCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC EVEKYNPIISGIITEKEIDDCKKNPNRVPNLIIKNIKKRSKAIGSILGFASTARRRDKPD HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH AIYYLVKKFPILDNNVIAKLISTTNYTVEQVRDGSHHNMQNIKPQDPVLLGLCSQENLEA HHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHH EVEKAKVEEEKQERLKKYKE HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA