Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

Click here to switch to the map view.

The map label for this gene is 225630401

Identifier: 225630401

GI number: 225630401

Start: 681784

End: 683085

Strand: Reverse

Name: 225630401

Synonym: WRi_006320

Alternate gene names: NA

Gene position: 683085-681784 (Counterclockwise)

Preceding gene: 225630402

Following gene: 225630400

Centisome position: 47.24

GC content: 33.26

Gene sequence:

>1302_bases
ATGGGTCAACATTTCAAGTTAACTGGTCAGGAGTTTTGTGATAATGCTGACCTGTTCAACGTATTGGAAGTAGAAGCTAA
GCAAGTTGTAGACAAGAATTATGAAGAGCTTAGCGCAATTTTGAAGAAACAGCATAAGCAGTTAATTCTTGTAAATCATC
CTGACAAGGGTGGAGATAAAAATAGATTTGATCAAATTTATAAAGCTTATCAAGAACTAAAAAAATATATTGAACCTTTG
GAATCAGGAAATCCTTGTGTTAAAGTCAGTATTGGCGCTGAAAGTGATGGGCGTTTAACAGCAAGAGAGTTTCACTATAG
GAAAAATTTGTTTAATAAGCTAAAAGTAAGTGAGGAAGAGGCTGTAGGTAAAGATTTTGATGGATTGATTTCTATACTAA
AAAGAAATGACTATTCGTTTGAAAAAGACCTAGAAAAACGCATTGAACTTGAAGATAAAATAGAGAGGATTTTGCAAAAT
CCAAATTTAGATGATTTTGAGAAGAATGTAAAGAGTGCAGGATTAATGGAAGAGCTATATCAATATATAGCAAAGCCAAG
CATACAATTATTCAATTATGTTACTCCTCTAGGAAAAAAGAGAAGCCTAATTGAAGAAGATAAAAAGACATTAGCATTGA
AATTTATAGAGCGTAAAAATGCCTTACTATTTATTCGGACTCTTAGTGTTCTACCCTTAGGCCTGTTAACTACAATTACT
ATAGGTTGCTATTTTTCATGGTGGATCATAGCACTTAATATCATTATTAGTAACGCCTCTCGTTTATTAATAGGTCATTA
TATGAAAAAATATGCCAACTCAGAAATTTCTACTGATGAATTCATGAGTAAAATAAACTATATCGCACTAGGTAGTAAGC
TTCTTATCAACTATCCTTTAGCTGCTTTTTCTGTTTATCTACTTACAACAAATTTCATTGCTAATAGATTAACTGTTGGT
GGAACCATACTTGGTTCACTATTGTTATTGGCAGTATTAATTGAAATGTTAGCTCCTGTTTTCTCAAAAGGCTGTGAAAT
ATATGCTGAAAAGCACACAAAAGATTTACTAGAAGAGGATCCAAGAGATAGGGTACAAAAGGAAACTGACCTGTTAGGAT
GGTATGATCCACGAAAACTGTTAATGCCAATTGTTATGCCTCTTGTTAAAAAGTGTTTTGCGGAAGTGGCAAGCGAATTT
GCTGAGAGGAATTTTGATGAGGTAAAAACTGATATGTCTGATGTTAATGCTAAAGGACTATCTAAGCCTAAAGGAATTGA
ATTTGCACAGCAACCAGTGTAG

Upstream 100 bases:

>100_bases
AGGGGTTTTTCTCTTAATGATCGTTTGACATTCTTATGATTGCATAAAACATTTAAATAGATTATACTAGAGATATAATT
TATTTATGTGAGATGTAGTA

Downstream 100 bases:

>100_bases
TATAAGCTTTTAGCTCTATGCATGGACTCAAAAAAAGTAGAATTGATATTTGAAAAGTTTCAACAATCAAATCCTGCACC
AAAAATAGAGCTGAATTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MGQHFKLTGQEFCDNADLFNVLEVEAKQVVDKNYEELSAILKKQHKQLILVNHPDKGGDKNRFDQIYKAYQELKKYIEPL
ESGNPCVKVSIGAESDGRLTAREFHYRKNLFNKLKVSEEEAVGKDFDGLISILKRNDYSFEKDLEKRIELEDKIERILQN
PNLDDFEKNVKSAGLMEELYQYIAKPSIQLFNYVTPLGKKRSLIEEDKKTLALKFIERKNALLFIRTLSVLPLGLLTTIT
IGCYFSWWIIALNIIISNASRLLIGHYMKKYANSEISTDEFMSKINYIALGSKLLINYPLAAFSVYLLTTNFIANRLTVG
GTILGSLLLLAVLIEMLAPVFSKGCEIYAEKHTKDLLEEDPRDRVQKETDLLGWYDPRKLLMPIVMPLVKKCFAEVASEF
AERNFDEVKTDMSDVNAKGLSKPKGIEFAQQPV

Sequences:

>Translated_433_residues
MGQHFKLTGQEFCDNADLFNVLEVEAKQVVDKNYEELSAILKKQHKQLILVNHPDKGGDKNRFDQIYKAYQELKKYIEPL
ESGNPCVKVSIGAESDGRLTAREFHYRKNLFNKLKVSEEEAVGKDFDGLISILKRNDYSFEKDLEKRIELEDKIERILQN
PNLDDFEKNVKSAGLMEELYQYIAKPSIQLFNYVTPLGKKRSLIEEDKKTLALKFIERKNALLFIRTLSVLPLGLLTTIT
IGCYFSWWIIALNIIISNASRLLIGHYMKKYANSEISTDEFMSKINYIALGSKLLINYPLAAFSVYLLTTNFIANRLTVG
GTILGSLLLLAVLIEMLAPVFSKGCEIYAEKHTKDLLEEDPRDRVQKETDLLGWYDPRKLLMPIVMPLVKKCFAEVASEF
AERNFDEVKTDMSDVNAKGLSKPKGIEFAQQPV
>Mature_432_residues
GQHFKLTGQEFCDNADLFNVLEVEAKQVVDKNYEELSAILKKQHKQLILVNHPDKGGDKNRFDQIYKAYQELKKYIEPLE
SGNPCVKVSIGAESDGRLTAREFHYRKNLFNKLKVSEEEAVGKDFDGLISILKRNDYSFEKDLEKRIELEDKIERILQNP
NLDDFEKNVKSAGLMEELYQYIAKPSIQLFNYVTPLGKKRSLIEEDKKTLALKFIERKNALLFIRTLSVLPLGLLTTITI
GCYFSWWIIALNIIISNASRLLIGHYMKKYANSEISTDEFMSKINYIALGSKLLINYPLAAFSVYLLTTNFIANRLTVGG
TILGSLLLLAVLIEMLAPVFSKGCEIYAEKHTKDLLEEDPRDRVQKETDLLGWYDPRKLLMPIVMPLVKKCFAEVASEFA
ERNFDEVKTDMSDVNAKGLSKPKGIEFAQQPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49530; Mature: 49399

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQHFKLTGQEFCDNADLFNVLEVEAKQVVDKNYEELSAILKKQHKQLILVNHPDKGGDK
CCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCCH
NRFDQIYKAYQELKKYIEPLESGNPCVKVSIGAESDGRLTAREFHYRKNLFNKLKVSEEE
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHH
AVGKDFDGLISILKRNDYSFEKDLEKRIELEDKIERILQNPNLDDFEKNVKSAGLMEELY
HCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
QYIAKPSIQLFNYVTPLGKKRSLIEEDKKTLALKFIERKNALLFIRTLSVLPLGLLTTIT
HHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHH
IGCYFSWWIIALNIIISNASRLLIGHYMKKYANSEISTDEFMSKINYIALGSKLLINYPL
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCH
AAFSVYLLTTNFIANRLTVGGTILGSLLLLAVLIEMLAPVFSKGCEIYAEKHTKDLLEED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PRDRVQKETDLLGWYDPRKLLMPIVMPLVKKCFAEVASEFAERNFDEVKTDMSDVNAKGL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
SKPKGIEFAQQPV
CCCCCCCCCCCCC
>Mature Secondary Structure 
GQHFKLTGQEFCDNADLFNVLEVEAKQVVDKNYEELSAILKKQHKQLILVNHPDKGGDK
CCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCCH
NRFDQIYKAYQELKKYIEPLESGNPCVKVSIGAESDGRLTAREFHYRKNLFNKLKVSEEE
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHH
AVGKDFDGLISILKRNDYSFEKDLEKRIELEDKIERILQNPNLDDFEKNVKSAGLMEELY
HCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
QYIAKPSIQLFNYVTPLGKKRSLIEEDKKTLALKFIERKNALLFIRTLSVLPLGLLTTIT
HHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHH
IGCYFSWWIIALNIIISNASRLLIGHYMKKYANSEISTDEFMSKINYIALGSKLLINYPL
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCH
AAFSVYLLTTNFIANRLTVGGTILGSLLLLAVLIEMLAPVFSKGCEIYAEKHTKDLLEED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PRDRVQKETDLLGWYDPRKLLMPIVMPLVKKCFAEVASEFAERNFDEVKTDMSDVNAKGL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
SKPKGIEFAQQPV
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA