| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630401
Identifier: 225630401
GI number: 225630401
Start: 681784
End: 683085
Strand: Reverse
Name: 225630401
Synonym: WRi_006320
Alternate gene names: NA
Gene position: 683085-681784 (Counterclockwise)
Preceding gene: 225630402
Following gene: 225630400
Centisome position: 47.24
GC content: 33.26
Gene sequence:
>1302_bases ATGGGTCAACATTTCAAGTTAACTGGTCAGGAGTTTTGTGATAATGCTGACCTGTTCAACGTATTGGAAGTAGAAGCTAA GCAAGTTGTAGACAAGAATTATGAAGAGCTTAGCGCAATTTTGAAGAAACAGCATAAGCAGTTAATTCTTGTAAATCATC CTGACAAGGGTGGAGATAAAAATAGATTTGATCAAATTTATAAAGCTTATCAAGAACTAAAAAAATATATTGAACCTTTG GAATCAGGAAATCCTTGTGTTAAAGTCAGTATTGGCGCTGAAAGTGATGGGCGTTTAACAGCAAGAGAGTTTCACTATAG GAAAAATTTGTTTAATAAGCTAAAAGTAAGTGAGGAAGAGGCTGTAGGTAAAGATTTTGATGGATTGATTTCTATACTAA AAAGAAATGACTATTCGTTTGAAAAAGACCTAGAAAAACGCATTGAACTTGAAGATAAAATAGAGAGGATTTTGCAAAAT CCAAATTTAGATGATTTTGAGAAGAATGTAAAGAGTGCAGGATTAATGGAAGAGCTATATCAATATATAGCAAAGCCAAG CATACAATTATTCAATTATGTTACTCCTCTAGGAAAAAAGAGAAGCCTAATTGAAGAAGATAAAAAGACATTAGCATTGA AATTTATAGAGCGTAAAAATGCCTTACTATTTATTCGGACTCTTAGTGTTCTACCCTTAGGCCTGTTAACTACAATTACT ATAGGTTGCTATTTTTCATGGTGGATCATAGCACTTAATATCATTATTAGTAACGCCTCTCGTTTATTAATAGGTCATTA TATGAAAAAATATGCCAACTCAGAAATTTCTACTGATGAATTCATGAGTAAAATAAACTATATCGCACTAGGTAGTAAGC TTCTTATCAACTATCCTTTAGCTGCTTTTTCTGTTTATCTACTTACAACAAATTTCATTGCTAATAGATTAACTGTTGGT GGAACCATACTTGGTTCACTATTGTTATTGGCAGTATTAATTGAAATGTTAGCTCCTGTTTTCTCAAAAGGCTGTGAAAT ATATGCTGAAAAGCACACAAAAGATTTACTAGAAGAGGATCCAAGAGATAGGGTACAAAAGGAAACTGACCTGTTAGGAT GGTATGATCCACGAAAACTGTTAATGCCAATTGTTATGCCTCTTGTTAAAAAGTGTTTTGCGGAAGTGGCAAGCGAATTT GCTGAGAGGAATTTTGATGAGGTAAAAACTGATATGTCTGATGTTAATGCTAAAGGACTATCTAAGCCTAAAGGAATTGA ATTTGCACAGCAACCAGTGTAG
Upstream 100 bases:
>100_bases AGGGGTTTTTCTCTTAATGATCGTTTGACATTCTTATGATTGCATAAAACATTTAAATAGATTATACTAGAGATATAATT TATTTATGTGAGATGTAGTA
Downstream 100 bases:
>100_bases TATAAGCTTTTAGCTCTATGCATGGACTCAAAAAAAGTAGAATTGATATTTGAAAAGTTTCAACAATCAAATCCTGCACC AAAAATAGAGCTGAATTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MGQHFKLTGQEFCDNADLFNVLEVEAKQVVDKNYEELSAILKKQHKQLILVNHPDKGGDKNRFDQIYKAYQELKKYIEPL ESGNPCVKVSIGAESDGRLTAREFHYRKNLFNKLKVSEEEAVGKDFDGLISILKRNDYSFEKDLEKRIELEDKIERILQN PNLDDFEKNVKSAGLMEELYQYIAKPSIQLFNYVTPLGKKRSLIEEDKKTLALKFIERKNALLFIRTLSVLPLGLLTTIT IGCYFSWWIIALNIIISNASRLLIGHYMKKYANSEISTDEFMSKINYIALGSKLLINYPLAAFSVYLLTTNFIANRLTVG GTILGSLLLLAVLIEMLAPVFSKGCEIYAEKHTKDLLEEDPRDRVQKETDLLGWYDPRKLLMPIVMPLVKKCFAEVASEF AERNFDEVKTDMSDVNAKGLSKPKGIEFAQQPV
Sequences:
>Translated_433_residues MGQHFKLTGQEFCDNADLFNVLEVEAKQVVDKNYEELSAILKKQHKQLILVNHPDKGGDKNRFDQIYKAYQELKKYIEPL ESGNPCVKVSIGAESDGRLTAREFHYRKNLFNKLKVSEEEAVGKDFDGLISILKRNDYSFEKDLEKRIELEDKIERILQN PNLDDFEKNVKSAGLMEELYQYIAKPSIQLFNYVTPLGKKRSLIEEDKKTLALKFIERKNALLFIRTLSVLPLGLLTTIT IGCYFSWWIIALNIIISNASRLLIGHYMKKYANSEISTDEFMSKINYIALGSKLLINYPLAAFSVYLLTTNFIANRLTVG GTILGSLLLLAVLIEMLAPVFSKGCEIYAEKHTKDLLEEDPRDRVQKETDLLGWYDPRKLLMPIVMPLVKKCFAEVASEF AERNFDEVKTDMSDVNAKGLSKPKGIEFAQQPV >Mature_432_residues GQHFKLTGQEFCDNADLFNVLEVEAKQVVDKNYEELSAILKKQHKQLILVNHPDKGGDKNRFDQIYKAYQELKKYIEPLE SGNPCVKVSIGAESDGRLTAREFHYRKNLFNKLKVSEEEAVGKDFDGLISILKRNDYSFEKDLEKRIELEDKIERILQNP NLDDFEKNVKSAGLMEELYQYIAKPSIQLFNYVTPLGKKRSLIEEDKKTLALKFIERKNALLFIRTLSVLPLGLLTTITI GCYFSWWIIALNIIISNASRLLIGHYMKKYANSEISTDEFMSKINYIALGSKLLINYPLAAFSVYLLTTNFIANRLTVGG TILGSLLLLAVLIEMLAPVFSKGCEIYAEKHTKDLLEEDPRDRVQKETDLLGWYDPRKLLMPIVMPLVKKCFAEVASEFA ERNFDEVKTDMSDVNAKGLSKPKGIEFAQQPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49530; Mature: 49399
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQHFKLTGQEFCDNADLFNVLEVEAKQVVDKNYEELSAILKKQHKQLILVNHPDKGGDK CCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCCH NRFDQIYKAYQELKKYIEPLESGNPCVKVSIGAESDGRLTAREFHYRKNLFNKLKVSEEE HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHH AVGKDFDGLISILKRNDYSFEKDLEKRIELEDKIERILQNPNLDDFEKNVKSAGLMEELY HCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH QYIAKPSIQLFNYVTPLGKKRSLIEEDKKTLALKFIERKNALLFIRTLSVLPLGLLTTIT HHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHH IGCYFSWWIIALNIIISNASRLLIGHYMKKYANSEISTDEFMSKINYIALGSKLLINYPL HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCH AAFSVYLLTTNFIANRLTVGGTILGSLLLLAVLIEMLAPVFSKGCEIYAEKHTKDLLEED HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC PRDRVQKETDLLGWYDPRKLLMPIVMPLVKKCFAEVASEFAERNFDEVKTDMSDVNAKGL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC SKPKGIEFAQQPV CCCCCCCCCCCCC >Mature Secondary Structure GQHFKLTGQEFCDNADLFNVLEVEAKQVVDKNYEELSAILKKQHKQLILVNHPDKGGDK CCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCCH NRFDQIYKAYQELKKYIEPLESGNPCVKVSIGAESDGRLTAREFHYRKNLFNKLKVSEEE HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHH AVGKDFDGLISILKRNDYSFEKDLEKRIELEDKIERILQNPNLDDFEKNVKSAGLMEELY HCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH QYIAKPSIQLFNYVTPLGKKRSLIEEDKKTLALKFIERKNALLFIRTLSVLPLGLLTTIT HHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHH IGCYFSWWIIALNIIISNASRLLIGHYMKKYANSEISTDEFMSKINYIALGSKLLINYPL HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCH AAFSVYLLTTNFIANRLTVGGTILGSLLLLAVLIEMLAPVFSKGCEIYAEKHTKDLLEED HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC PRDRVQKETDLLGWYDPRKLLMPIVMPLVKKCFAEVASEFAERNFDEVKTDMSDVNAKGL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC SKPKGIEFAQQPV CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA