| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630363
Identifier: 225630363
GI number: 225630363
Start: 630440
End: 631573
Strand: Reverse
Name: 225630363
Synonym: WRi_005860
Alternate gene names: NA
Gene position: 631573-630440 (Counterclockwise)
Preceding gene: 225630364
Following gene: 225630362
Centisome position: 43.68
GC content: 37.13
Gene sequence:
>1134_bases ATGACTAGTAAAGATCGGAATAAAAAGACTAATGTTAATCACAAGAAAATATTTGGTGCTCTTGAAGGCGTTGATATAAA GCAGTCTAAATTTGTGAGTAAAATTAATAACCAGAAGGAGATAAACCGGGAGGCCTCCCCTAGCAGAAACATTCGCGAAA ACAAAATCAACTACGGGAAAAGCCTTGACTATGTTTATGGCACAAAACCTTTAAATGATCAAGCAGAAGATTTAAATCCA TTTGCTTCAAATTTGCAAAAAATAAAACCAAGTGCAAGCGAAAGTGAAAAGTTGAGCTGGTTTAAGAGTGCTGTAGTAGA GACAAAAAACGTAAATGCATTGCATAAAGTTATAGAGCAAGTATTAGCCTCTGGAGCAAGAGTAAATGCATGTAATGATG GGGAGTGGAGCTTCGCAGAATACATGATATTGGGCACACACTTTCACAGATTAGAAAAAAGTGATCGAAAAAAGATAATG CGTAAGCTAATGCTAAGTGGTGCAGAGTTTCATGATACTCTACTACAGAATAAACTGATAGGTGAAATCTATAATGAGCT ACAACCAGAAGTTCAGCCACAGATAGATGAGAGACTAGAAGAACTAGAGAAAGCTGGCGAAAGTGCTGTGCAAGAAGGAG AATTAATAGATGTTGAGATAGATAATACAACATCGTACATAGAGTTTTCTGGGAATAGCAAGGTAGAGGTAGCCAAAATA CTGAGAGAGTTAGGGAGTAACATTTTAAAAATGGGTAATAATGCAGTTGAGATCAGAAGGGAGGAAGGAGGTGCAAGAAA TTACGTTGATGTATCAGATGGTAGCTCCGTTGTGTTAGAATTTCCTACAAGCCTTGGTAAGCTAAATATTGTATTGTACC AGGACGTAAAAAACTGCAGTCAGGTACAAGTAAAAGTAGCGGATAAGGAAATGTGGGCTGAATTACAAAAAAGAGGAGAA GAAATTGGAAAAAATTGCCTTTTTGGGGGAGTGAAACTTAAGAAAGTGGTAGAAAGAGGTAATTTCACTAGGTGCGGCAT ATGGAGTGAAAAGCAGAAGGAAGTAAGTGAAAAATTGTTTTCATGGGCAGACAAAGTACGTGAAAATAGTAAAGAAACTT GTAGGGCACTTTAA
Upstream 100 bases:
>100_bases TAGAAAGTATTTGCAAATCTACTCATTATAATTTATAATGAGTAGTAAGATGTATAAAGTTTATTGTACGCTTAAAAAGT ATTTTTAATATGAGGTTTAT
Downstream 100 bases:
>100_bases TTCATCAATTTAAAGGTTCCAGAGTCTGGCTATTATATCTGGAGCCTTTGAGCTATAGTATAAAATATTATATGTATGGT TCTTTTTGTGGAAAAAAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MTSKDRNKKTNVNHKKIFGALEGVDIKQSKFVSKINNQKEINREASPSRNIRENKINYGKSLDYVYGTKPLNDQAEDLNP FASNLQKIKPSASESEKLSWFKSAVVETKNVNALHKVIEQVLASGARVNACNDGEWSFAEYMILGTHFHRLEKSDRKKIM RKLMLSGAEFHDTLLQNKLIGEIYNELQPEVQPQIDERLEELEKAGESAVQEGELIDVEIDNTTSYIEFSGNSKVEVAKI LRELGSNILKMGNNAVEIRREEGGARNYVDVSDGSSVVLEFPTSLGKLNIVLYQDVKNCSQVQVKVADKEMWAELQKRGE EIGKNCLFGGVKLKKVVERGNFTRCGIWSEKQKEVSEKLFSWADKVRENSKETCRAL
Sequences:
>Translated_377_residues MTSKDRNKKTNVNHKKIFGALEGVDIKQSKFVSKINNQKEINREASPSRNIRENKINYGKSLDYVYGTKPLNDQAEDLNP FASNLQKIKPSASESEKLSWFKSAVVETKNVNALHKVIEQVLASGARVNACNDGEWSFAEYMILGTHFHRLEKSDRKKIM RKLMLSGAEFHDTLLQNKLIGEIYNELQPEVQPQIDERLEELEKAGESAVQEGELIDVEIDNTTSYIEFSGNSKVEVAKI LRELGSNILKMGNNAVEIRREEGGARNYVDVSDGSSVVLEFPTSLGKLNIVLYQDVKNCSQVQVKVADKEMWAELQKRGE EIGKNCLFGGVKLKKVVERGNFTRCGIWSEKQKEVSEKLFSWADKVRENSKETCRAL >Mature_376_residues TSKDRNKKTNVNHKKIFGALEGVDIKQSKFVSKINNQKEINREASPSRNIRENKINYGKSLDYVYGTKPLNDQAEDLNPF ASNLQKIKPSASESEKLSWFKSAVVETKNVNALHKVIEQVLASGARVNACNDGEWSFAEYMILGTHFHRLEKSDRKKIMR KLMLSGAEFHDTLLQNKLIGEIYNELQPEVQPQIDERLEELEKAGESAVQEGELIDVEIDNTTSYIEFSGNSKVEVAKIL RELGSNILKMGNNAVEIRREEGGARNYVDVSDGSSVVLEFPTSLGKLNIVLYQDVKNCSQVQVKVADKEMWAELQKRGEE IGKNCLFGGVKLKKVVERGNFTRCGIWSEKQKEVSEKLFSWADKVRENSKETCRAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42680; Mature: 42549
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKDRNKKTNVNHKKIFGALEGVDIKQSKFVSKINNQKEINREASPSRNIRENKINYGK CCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCHHHHCCCCC SLDYVYGTKPLNDQAEDLNPFASNLQKIKPSASESEKLSWFKSAVVETKNVNALHKVIEQ CCCEEECCCCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH VLASGARVNACNDGEWSFAEYMILGTHFHRLEKSDRKKIMRKLMLSGAEFHDTLLQNKLI HHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GEIYNELQPEVQPQIDERLEELEKAGESAVQEGELIDVEIDNTTSYIEFSGNSKVEVAKI HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCHHHHHH LRELGSNILKMGNNAVEIRREEGGARNYVDVSDGSSVVLEFPTSLGKLNIVLYQDVKNCS HHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCCCEEEEECCCCCCCEEEEEECCCCCCH QVQVKVADKEMWAELQKRGEEIGKNCLFGGVKLKKVVERGNFTRCGIWSEKQKEVSEKLF HEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEECCCCCHHHHHHHHHHH SWADKVRENSKETCRAL HHHHHHHHCCHHHHHCC >Mature Secondary Structure TSKDRNKKTNVNHKKIFGALEGVDIKQSKFVSKINNQKEINREASPSRNIRENKINYGK CCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCHHHHCCCCC SLDYVYGTKPLNDQAEDLNPFASNLQKIKPSASESEKLSWFKSAVVETKNVNALHKVIEQ CCCEEECCCCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH VLASGARVNACNDGEWSFAEYMILGTHFHRLEKSDRKKIMRKLMLSGAEFHDTLLQNKLI HHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH GEIYNELQPEVQPQIDERLEELEKAGESAVQEGELIDVEIDNTTSYIEFSGNSKVEVAKI HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCHHHHHH LRELGSNILKMGNNAVEIRREEGGARNYVDVSDGSSVVLEFPTSLGKLNIVLYQDVKNCS HHHHHHHHHHHCCCCEEEEECCCCCCCEEECCCCCEEEEECCCCCCCEEEEEECCCCCCH QVQVKVADKEMWAELQKRGEEIGKNCLFGGVKLKKVVERGNFTRCGIWSEKQKEVSEKLF HEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEECCCCCHHHHHHHHHHH SWADKVRENSKETCRAL HHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA