| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630342
Identifier: 225630342
GI number: 225630342
Start: 599814
End: 600269
Strand: Reverse
Name: 225630342
Synonym: WRi_005650
Alternate gene names: NA
Gene position: 600269-599814 (Counterclockwise)
Preceding gene: 225630347
Following gene: 225630341
Centisome position: 41.52
GC content: 39.47
Gene sequence:
>456_bases ATGTCAATCCTCACACTCGACCTCGGCAAACAAACCGGCTGGGCAATTCTAACAGATGGAATAATTGAAAGTGGGAGCAA AAGCTTTCATGGTAGTCGTTTCAGCGGAGGTGGAATGTGTTTCTTAAACTTTTGCAATTGGCTCAATTCTTTGAAAGACA TTTCTGCAGTGTACTTTGAGGAGGTGAGAAGACATTTAGGAACTGATGCAGCCCATTGCTACGGTGGGTTTCTTGCAGTG CTGTCTGCTTGGTGTGAAGAGAACAATATTCCCTACCAAGGTGTTAATGTTAAAACTATAAAACGCTTTATAGCAGGCAA AGGCAATGCAAGTAAGAGTGAAGTTATTGAAGCGATACGTGAAAAAAGTTTTTCACCTAGAGATGATAATGAGGCCGATG CTTTGGCATTAATGTTCTATATTAGTAAAGATATTAATAAGACGAAAAATCCATAA
Upstream 100 bases:
>100_bases GCATAAGATTCTTGTCATTGGCCAACAAAAACCCATTCATAGCGTATTTTGAAGGAACCAGACGATATTTAGCGCTACTT ATAGTTTTAAATAATAGCAA
Downstream 100 bases:
>100_bases AAAGTGGGTCCTTTCAGCCAGAATGGCGGATTTGGTGGGTTCAACCCCAGGCCTTCTTTAGCGTCAGAGATATTTTGAAT ATTAACTTTTTAATTATTAA
Product: Putative Holliday junction resolvasome, endonuclease subunit
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSILTLDLGKQTGWAILTDGIIESGSKSFHGSRFSGGGMCFLNFCNWLNSLKDISAVYFEEVRRHLGTDAAHCYGGFLAV LSAWCEENNIPYQGVNVKTIKRFIAGKGNASKSEVIEAIREKSFSPRDDNEADALALMFYISKDINKTKNP
Sequences:
>Translated_151_residues MSILTLDLGKQTGWAILTDGIIESGSKSFHGSRFSGGGMCFLNFCNWLNSLKDISAVYFEEVRRHLGTDAAHCYGGFLAV LSAWCEENNIPYQGVNVKTIKRFIAGKGNASKSEVIEAIREKSFSPRDDNEADALALMFYISKDINKTKNP >Mature_150_residues SILTLDLGKQTGWAILTDGIIESGSKSFHGSRFSGGGMCFLNFCNWLNSLKDISAVYFEEVRRHLGTDAAHCYGGFLAVL SAWCEENNIPYQGVNVKTIKRFIAGKGNASKSEVIEAIREKSFSPRDDNEADALALMFYISKDINKTKNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16678; Mature: 16547
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILTLDLGKQTGWAILTDGIIESGSKSFHGSRFSGGGMCFLNFCNWLNSLKDISAVYFE CCEEEEECCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH EVRRHLGTDAAHCYGGFLAVLSAWCEENNIPYQGVNVKTIKRFIAGKGNASKSEVIEAIR HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH EKSFSPRDDNEADALALMFYISKDINKTKNP HCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SILTLDLGKQTGWAILTDGIIESGSKSFHGSRFSGGGMCFLNFCNWLNSLKDISAVYFE CEEEEECCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH EVRRHLGTDAAHCYGGFLAVLSAWCEENNIPYQGVNVKTIKRFIAGKGNASKSEVIEAIR HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH EKSFSPRDDNEADALALMFYISKDINKTKNP HCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA