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The map label for this gene is secY [H]

Identifier: 225630282

GI number: 225630282

Start: 542775

End: 544103

Strand: Reverse

Name: secY [H]

Synonym: WRi_005000

Alternate gene names: 225630282

Gene position: 544103-542775 (Counterclockwise)

Preceding gene: 225630283

Following gene: 225630281

Centisome position: 37.63

GC content: 32.13

Gene sequence:

>1329_bases
ATGGGCAATAAATCAGCATTTAATAGCTTGGATCCTACGTTGTTATATAAAGGCGATTTATTAAAGCGTATATTTTTTAC
GCTAATAGCTTTAATTTGCTATCGCTTGGGTACTTATGTGCCTATTCCTGGAATTAATCTTGATGTAATTAATGATATAT
TTCCCAAAGATGGCTCAGGCGTTTTTGGAGTATTTAATTTATTTTCTGGTGGTGCATTGGCTAGAATGACAATTCTAGCA
TTGAACGTTATGCCATATATAATGGCTTCTATCATTATTCAGTTACTTTCTTCTGCGATTAAAGGAATGAAGGAAGTTAA
GAATGATGGAGAGTCAGGCCGTAGAAAGATGAATTCTTATATACGCTATCTGACCATAGTAATTTGTGTATTTCAATCAA
TTCCAATTTTGGTTGGATTGGAAGGGATGAATAGGGAAGGGGTATTGGTTGTAATCGAACCTGGTGTTATGTTTCGTACA
ATAGGTGTTTTCAGCCTTTTAGGTGGAACTATGCTTTTAATATGGCTTGGTGAACGAATCAGCGCTAGCGGTATAGGCAA
TGGTATCTCATTAATCATTTTCACGGGTATAATATCAGAGTTACACAGCGCTTTGTCATCTTTGTTAACGTTAAATAAAA
ACGGTAGCGTATCGTTATTTATTATCCTTTTTGTTTTGGTATTGTTTTTTTTGCTGCTACTCTTAGTCATTTTTGTAGAG
TCTTCTTATAGAAAGGTTATTGTTCAACATCCTAAAAAGCAATTTAAAAGATTACATAATGACGATTTTACTTATATTCC
ATTGAAGATTAATTTATCTGGTGTAGTACCAACCATTTTTGCTAATGCAATTTTATTGACACCTATTTCAATTGCAAATT
TCTATAAGGGGCACGCTTTTTCTGATTTTATTTTGAATTACTTTATGGCAAATAAAGTAGTATATATTGTAGCCTATTTG
GTGCTGATAGTATTTTTTAATTTTTTCTATACCAATTTTATATTTAATCCAGAGGAAAACGCAGATTTTCTTAAAAAAAA
TGGTGGTTTTATACCTGGTAGAAGGCCTGGGAAACATACTTCTGATTACCTTCAAGATATAGTTTTTAAGTTGACATTCA
TTGGCTCTGCGTATTTGGTAGTCATATGTACTGTACCTGAAGTTATGAGATATTATTATGATATACCATTTATTTTTGGT
GGGACGAGCTTACTGATTATAGTGAACGTTATTACTGATACTATTATGCAAATACAATCTTATATTTTTTCAAATAGGTA
CGACAACTGGATAAAGAAATATGAGTCTAAAACGAGGAAAGTAAGATGA

Upstream 100 bases:

>100_bases
GTTGAGCGAAAAATTTGTGTTTCATGTTGATTTTGCGTCAGAAGCTGCAAAAAAATCTGTAGCTTCAGTTGGTGGTAGTG
TGGAAATACTATCGTAAGTC

Downstream 100 bases:

>100_bases
TCATTACGATTTTTGGTCCTCCAGGTTCTGGTAAAGGTACTCAGTCAAGCTTGTTAATAGCAAAATATAATTTAAAATTA
ATTTCAGTAGGGGATTTATT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MGNKSAFNSLDPTLLYKGDLLKRIFFTLIALICYRLGTYVPIPGINLDVINDIFPKDGSGVFGVFNLFSGGALARMTILA
LNVMPYIMASIIIQLLSSAIKGMKEVKNDGESGRRKMNSYIRYLTIVICVFQSIPILVGLEGMNREGVLVVIEPGVMFRT
IGVFSLLGGTMLLIWLGERISASGIGNGISLIIFTGIISELHSALSSLLTLNKNGSVSLFIILFVLVLFFLLLLLVIFVE
SSYRKVIVQHPKKQFKRLHNDDFTYIPLKINLSGVVPTIFANAILLTPISIANFYKGHAFSDFILNYFMANKVVYIVAYL
VLIVFFNFFYTNFIFNPEENADFLKKNGGFIPGRRPGKHTSDYLQDIVFKLTFIGSAYLVVICTVPEVMRYYYDIPFIFG
GTSLLIIVNVITDTIMQIQSYIFSNRYDNWIKKYESKTRKVR

Sequences:

>Translated_442_residues
MGNKSAFNSLDPTLLYKGDLLKRIFFTLIALICYRLGTYVPIPGINLDVINDIFPKDGSGVFGVFNLFSGGALARMTILA
LNVMPYIMASIIIQLLSSAIKGMKEVKNDGESGRRKMNSYIRYLTIVICVFQSIPILVGLEGMNREGVLVVIEPGVMFRT
IGVFSLLGGTMLLIWLGERISASGIGNGISLIIFTGIISELHSALSSLLTLNKNGSVSLFIILFVLVLFFLLLLLVIFVE
SSYRKVIVQHPKKQFKRLHNDDFTYIPLKINLSGVVPTIFANAILLTPISIANFYKGHAFSDFILNYFMANKVVYIVAYL
VLIVFFNFFYTNFIFNPEENADFLKKNGGFIPGRRPGKHTSDYLQDIVFKLTFIGSAYLVVICTVPEVMRYYYDIPFIFG
GTSLLIIVNVITDTIMQIQSYIFSNRYDNWIKKYESKTRKVR
>Mature_441_residues
GNKSAFNSLDPTLLYKGDLLKRIFFTLIALICYRLGTYVPIPGINLDVINDIFPKDGSGVFGVFNLFSGGALARMTILAL
NVMPYIMASIIIQLLSSAIKGMKEVKNDGESGRRKMNSYIRYLTIVICVFQSIPILVGLEGMNREGVLVVIEPGVMFRTI
GVFSLLGGTMLLIWLGERISASGIGNGISLIIFTGIISELHSALSSLLTLNKNGSVSLFIILFVLVLFFLLLLLVIFVES
SYRKVIVQHPKKQFKRLHNDDFTYIPLKINLSGVVPTIFANAILLTPISIANFYKGHAFSDFILNYFMANKVVYIVAYLV
LIVFFNFFYTNFIFNPEENADFLKKNGGFIPGRRPGKHTSDYLQDIVFKLTFIGSAYLVVICTVPEVMRYYYDIPFIFGG
TSLLIIVNVITDTIMQIQSYIFSNRYDNWIKKYESKTRKVR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=425, Percent_Identity=43.2941176470588, Blast_Score=328, Evalue=3e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 49770; Mature: 49639

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNKSAFNSLDPTLLYKGDLLKRIFFTLIALICYRLGTYVPIPGINLDVINDIFPKDGSG
CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCC
VFGVFNLFSGGALARMTILALNVMPYIMASIIIQLLSSAIKGMKEVKNDGESGRRKMNSY
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IRYLTIVICVFQSIPILVGLEGMNREGVLVVIEPGVMFRTIGVFSLLGGTMLLIWLGERI
HHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHH
SASGIGNGISLIIFTGIISELHSALSSLLTLNKNGSVSLFIILFVLVLFFLLLLLVIFVE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
SSYRKVIVQHPKKQFKRLHNDDFTYIPLKINLSGVVPTIFANAILLTPISIANFYKGHAF
CHHHHHHHHCHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHH
SDFILNYFMANKVVYIVAYLVLIVFFNFFYTNFIFNPEENADFLKKNGGFIPGRRPGKHT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCH
SDYLQDIVFKLTFIGSAYLVVICTVPEVMRYYYDIPFIFGGTSLLIIVNVITDTIMQIQS
HHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHH
YIFSNRYDNWIKKYESKTRKVR
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GNKSAFNSLDPTLLYKGDLLKRIFFTLIALICYRLGTYVPIPGINLDVINDIFPKDGSG
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCC
VFGVFNLFSGGALARMTILALNVMPYIMASIIIQLLSSAIKGMKEVKNDGESGRRKMNSY
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IRYLTIVICVFQSIPILVGLEGMNREGVLVVIEPGVMFRTIGVFSLLGGTMLLIWLGERI
HHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHH
SASGIGNGISLIIFTGIISELHSALSSLLTLNKNGSVSLFIILFVLVLFFLLLLLVIFVE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
SSYRKVIVQHPKKQFKRLHNDDFTYIPLKINLSGVVPTIFANAILLTPISIANFYKGHAF
CHHHHHHHHCHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHH
SDFILNYFMANKVVYIVAYLVLIVFFNFFYTNFIFNPEENADFLKKNGGFIPGRRPGKHT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCH
SDYLQDIVFKLTFIGSAYLVVICTVPEVMRYYYDIPFIFGGTSLLIIVNVITDTIMQIQS
HHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHH
YIFSNRYDNWIKKYESKTRKVR
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA