| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is adk [H]
Identifier: 225630281
GI number: 225630281
Start: 542137
End: 542778
Strand: Reverse
Name: adk [H]
Synonym: WRi_004990
Alternate gene names: 225630281
Gene position: 542778-542137 (Counterclockwise)
Preceding gene: 225630282
Following gene: 225630280
Centisome position: 37.54
GC content: 31.78
Gene sequence:
>642_bases ATGATCATTACGATTTTTGGTCCTCCAGGTTCTGGTAAAGGTACTCAGTCAAGCTTGTTAATAGCAAAATATAATTTAAA ATTAATTTCAGTAGGGGATTTATTAAGGAATATTATATCTAGCAGTAGTGAGTTAGGTAAAAAAATAAAGGGTACCGTGG AATCTGGTAATTTAATTCAAGATGAAATTATATGTGGATTATTACGTGACCAGCTTGCATTAGTGGATGATAATTGCTTA TTAGATGGTTTTCCGAGAAATTTAAACCAGGCTCATTTTTTGACTCAAGTTTTGCAAGAAAAATATAATAGGGATGTTGA CATTGTAGTTGAGCTACAGCTTGACGATAATATTGCAATCGATAGGTTAAAAAATCGTCTCGCGTGTTTGGACTGTAAAA GCATATATAGTGTATCTTCTTTTAAGAGTACTACTTGTGCTAAATGTAAAAGTACGAGGTTAGAGAAAAGAATTGATGAT GCTGATATGTCTGCAATTAATAAGAGAATAAGTGAATATCACCTTCAAATGAAAGGTTTACGCGAGTATTATAAAGGCAA ATTATTAACAATTGACGCTAATTTGAGTGTTGATGAGGTAACGCAAGAGATTGAAAGTAAAATTTCTTGTAATTTGGTTT GA
Upstream 100 bases:
>100_bases ACGTTATTACTGATACTATTATGCAAATACAATCTTATATTTTTTCAAATAGGTACGACAACTGGATAAAGAAATATGAG TCTAAAACGAGGAAAGTAAG
Downstream 100 bases:
>100_bases CTCTGAGTTGTTTTATGGTATAAATTAAGAGTTGTTATTAATAAAGTATCGAGGTACCAGTGGCACGTATTGCAGGCATA AATATTCCAGTGAGGAAATG
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MIITIFGPPGSGKGTQSSLLIAKYNLKLISVGDLLRNIISSSSELGKKIKGTVESGNLIQDEIICGLLRDQLALVDDNCL LDGFPRNLNQAHFLTQVLQEKYNRDVDIVVELQLDDNIAIDRLKNRLACLDCKSIYSVSSFKSTTCAKCKSTRLEKRIDD ADMSAINKRISEYHLQMKGLREYYKGKLLTIDANLSVDEVTQEIESKISCNLV
Sequences:
>Translated_213_residues MIITIFGPPGSGKGTQSSLLIAKYNLKLISVGDLLRNIISSSSELGKKIKGTVESGNLIQDEIICGLLRDQLALVDDNCL LDGFPRNLNQAHFLTQVLQEKYNRDVDIVVELQLDDNIAIDRLKNRLACLDCKSIYSVSSFKSTTCAKCKSTRLEKRIDD ADMSAINKRISEYHLQMKGLREYYKGKLLTIDANLSVDEVTQEIESKISCNLV >Mature_213_residues MIITIFGPPGSGKGTQSSLLIAKYNLKLISVGDLLRNIISSSSELGKKIKGTVESGNLIQDEIICGLLRDQLALVDDNCL LDGFPRNLNQAHFLTQVLQEKYNRDVDIVVELQLDDNIAIDRLKNRLACLDCKSIYSVSSFKSTTCAKCKSTRLEKRIDD ADMSAINKRISEYHLQMKGLREYYKGKLLTIDANLSVDEVTQEIESKISCNLV
Specific function: This small ubiquitous enzyme is essential for maintenance and cell growth [H]
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4502013, Length=211, Percent_Identity=34.5971563981043, Blast_Score=114, Evalue=8e-26, Organism=Homo sapiens, GI7524346, Length=211, Percent_Identity=34.5971563981043, Blast_Score=114, Evalue=9e-26, Organism=Homo sapiens, GI19923437, Length=186, Percent_Identity=33.8709677419355, Blast_Score=90, Evalue=1e-18, Organism=Homo sapiens, GI310110345, Length=186, Percent_Identity=30.1075268817204, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI53832003, Length=186, Percent_Identity=30.1075268817204, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI8051579, Length=186, Percent_Identity=30.1075268817204, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI53832001, Length=186, Percent_Identity=30.1075268817204, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI4502011, Length=208, Percent_Identity=27.8846153846154, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI7706497, Length=213, Percent_Identity=29.5774647887324, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI28144899, Length=204, Percent_Identity=30.3921568627451, Blast_Score=71, Evalue=5e-13, Organism=Homo sapiens, GI28144897, Length=204, Percent_Identity=30.3921568627451, Blast_Score=71, Evalue=5e-13, Organism=Escherichia coli, GI1786680, Length=216, Percent_Identity=32.8703703703704, Blast_Score=114, Evalue=6e-27, Organism=Caenorhabditis elegans, GI17552384, Length=212, Percent_Identity=34.4339622641509, Blast_Score=112, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17567503, Length=205, Percent_Identity=28.780487804878, Blast_Score=79, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17550688, Length=208, Percent_Identity=25.9615384615385, Blast_Score=67, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17537943, Length=184, Percent_Identity=24.4565217391304, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17533833, Length=209, Percent_Identity=27.7511961722488, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6320432, Length=214, Percent_Identity=29.4392523364486, Blast_Score=104, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6321018, Length=187, Percent_Identity=33.1550802139037, Blast_Score=94, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6322828, Length=219, Percent_Identity=26.027397260274, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI22026816, Length=208, Percent_Identity=34.1346153846154, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI17737899, Length=189, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI24645822, Length=189, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI24663208, Length=215, Percent_Identity=27.4418604651163, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI17647141, Length=215, Percent_Identity=27.4418604651163, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI221459597, Length=208, Percent_Identity=27.4038461538462, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI21356893, Length=208, Percent_Identity=27.4038461538462, Blast_Score=74, Evalue=7e-14,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000850 [H]
Pfam domain/function: PF00406 ADK [H]
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 23760; Mature: 23760
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIITIFGPPGSGKGTQSSLLIAKYNLKLISVGDLLRNIISSSSELGKKIKGTVESGNLIQ CEEEEECCCCCCCCCCCEEEEEEECEEEEEHHHHHHHHHHCCHHHHHHHCCCCCCCCCHH DEIICGLLRDQLALVDDNCLLDGFPRNLNQAHFLTQVLQEKYNRDVDIVVELQLDDNIAI HHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCHH DRLKNRLACLDCKSIYSVSSFKSTTCAKCKSTRLEKRIDDADMSAINKRISEYHLQMKGL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH REYYKGKLLTIDANLSVDEVTQEIESKISCNLV HHHHCCEEEEEECCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIITIFGPPGSGKGTQSSLLIAKYNLKLISVGDLLRNIISSSSELGKKIKGTVESGNLIQ CEEEEECCCCCCCCCCCEEEEEEECEEEEEHHHHHHHHHHCCHHHHHHHCCCCCCCCCHH DEIICGLLRDQLALVDDNCLLDGFPRNLNQAHFLTQVLQEKYNRDVDIVVELQLDDNIAI HHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCHH DRLKNRLACLDCKSIYSVSSFKSTTCAKCKSTRLEKRIDDADMSAINKRISEYHLQMKGL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH REYYKGKLLTIDANLSVDEVTQEIESKISCNLV HHHHCCEEEEEECCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA