Definition Wolbachia sp. wRi, complete genome.
Accession NC_012416
Length 1,445,873

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The map label for this gene is 225630244

Identifier: 225630244

GI number: 225630244

Start: 493117

End: 493620

Strand: Reverse

Name: 225630244

Synonym: WRi_004580

Alternate gene names: NA

Gene position: 493620-493117 (Counterclockwise)

Preceding gene: 225630245

Following gene: 225630242

Centisome position: 34.14

GC content: 30.75

Gene sequence:

>504_bases
ATGAAAATACATATATATTTAATATTGTTTTTATTTTTTTCTTGCACTCAACTATATGCTGACGAGGAAATTGCAAAATT
TGATTTACTTATTGGCGAGATAAATGAAGCAAGCTTCACTCTTAAAGGTGCAATAAAGGTTACAGTAGAACCAGGCTGGC
ACATATATTATAAAGATCCTGGAGATTTTGGCCTTCCCACGTCTATTAGTTACGAAGGTAATGCATCAGATATAAATATT
CACTGGCCTATTCCAAAGGAACATAAAGATAAAGTAGGGAGAGAGACGTTTGTAAGTAACGTATATGAGGATATGGTATT
ATTTCCCTTTAAGATGAATATATTTTTAAATCAAGGGTATATTGACCTTAACTTCCATATAAATTATGCGATATGTAAAG
ATAGGTGCATCCCTAAAAATGTTGAGATAAAAATCAGGCAACCATTAAAGGATTTTATAGATTCTGATATCAATAAACTT
ATAAATGAGTGGTATGAAAAATAG

Upstream 100 bases:

>100_bases
TATAGCATAATGCTATATTAATAAATAATCTATATAATACTATTAAATATAATAATTAAAATCTAAATTACTTTCTCTAT
AAAAGGAGAAATTTACCTTA

Downstream 100 bases:

>100_bases
AGTTCTCATGGGGTAGGTGTCATTCCAGCGCGTGACACTGGAATCTCATTTACTTTTTTGTTCACTATGTGAGGAACTTG
GGCCTACAAGTATATAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKIHIYLILFLFFSCTQLYADEEIAKFDLLIGEINEASFTLKGAIKVTVEPGWHIYYKDPGDFGLPTSISYEGNASDINI
HWPIPKEHKDKVGRETFVSNVYEDMVLFPFKMNIFLNQGYIDLNFHINYAICKDRCIPKNVEIKIRQPLKDFIDSDINKL
INEWYEK

Sequences:

>Translated_167_residues
MKIHIYLILFLFFSCTQLYADEEIAKFDLLIGEINEASFTLKGAIKVTVEPGWHIYYKDPGDFGLPTSISYEGNASDINI
HWPIPKEHKDKVGRETFVSNVYEDMVLFPFKMNIFLNQGYIDLNFHINYAICKDRCIPKNVEIKIRQPLKDFIDSDINKL
INEWYEK
>Mature_167_residues
MKIHIYLILFLFFSCTQLYADEEIAKFDLLIGEINEASFTLKGAIKVTVEPGWHIYYKDPGDFGLPTSISYEGNASDINI
HWPIPKEHKDKVGRETFVSNVYEDMVLFPFKMNIFLNQGYIDLNFHINYAICKDRCIPKNVEIKIRQPLKDFIDSDINKL
INEWYEK

Specific function: Unknown

COG id: COG4233

COG function: function code OC; Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19591; Mature: 19591

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHIYLILFLFFSCTQLYADEEIAKFDLLIGEINEASFTLKGAIKVTVEPGWHIYYKDP
CEEEEEEHHHHHHHHHHHHCCCHHHEEEEEEECCCCCEEEEEEEEEEEECCCEEEEEECC
GDFGLPTSISYEGNASDINIHWPIPKEHKDKVGRETFVSNVYEDMVLFPFKMNIFLNQGY
CCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCE
IDLNFHINYAICKDRCIPKNVEIKIRQPLKDFIDSDINKLINEWYEK
EEEEEEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIHIYLILFLFFSCTQLYADEEIAKFDLLIGEINEASFTLKGAIKVTVEPGWHIYYKDP
CEEEEEEHHHHHHHHHHHHCCCHHHEEEEEEECCCCCEEEEEEEEEEEECCCEEEEEECC
GDFGLPTSISYEGNASDINIHWPIPKEHKDKVGRETFVSNVYEDMVLFPFKMNIFLNQGY
CCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCE
IDLNFHINYAICKDRCIPKNVEIKIRQPLKDFIDSDINKLINEWYEK
EEEEEEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA