| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is ubiG [H]
Identifier: 225630228
GI number: 225630228
Start: 469697
End: 470872
Strand: Reverse
Name: ubiG [H]
Synonym: WRi_004370
Alternate gene names: 225630228
Gene position: 470872-469697 (Counterclockwise)
Preceding gene: 225630230
Following gene: 225630227
Centisome position: 32.57
GC content: 36.05
Gene sequence:
>1176_bases ATGTTAGGTATAGTATCAATTGCCTCAGATCATTCTGGTTATGAATTAAAATCAGAAATAAAACCTTACCTGGAAGCCCT AGGTTACAGAGTGGTAGATCAAGGCTGCACTGCTCAGCAAAAGTGCGTGGATTATCCAGACTATGCTGTTAAAGTTGTAG AAGATATAACAAGCAAAAAAGCAAATTATGGGATATTAATTTGTGGTACAGGTTTGGGCATGAGTACTGTGGCAAATCGT TTTGAAGGAATCTACGCTGCTTTATGTAACAGTGTTGAGATCGCAAAATTAGCTCGCGAGCATGGCAACGCAAATGTACT GTGTCTTGGTGCAGGGTTTACTGCGAGTGGATTAGCAAAAGACATAGTCAAACAATTCCTCGAAACAGAATTTTCAAAAG AAAGCAGACATAAAAAACGCCTTGATAAACTCAGCAATATAACCTCTAAGAAAAAAAAAACAAAAACTTATAACGAAGAT GAAATATCAAAATTCGCTAAAATGGCAGGCCAGTGGTGGGATGAGAACGGCAAATTCAAACCATTGCACATAATGAATCC TGTTAGAGTATCTTACATTATTGAGAAAATAAAAGAGTTAAAAAAATGCAATTTGAAAGAATTATCATTGCTTGATGTTG GATGCGGTGGTGGCATTTTGTCAGAGTCAATGGCACGCGTTGGCATTAACGTTGTGGGAATAGATGTATGTGAAGAAAAC ATAAAAGTAGCGCATTCACATGCAAAAAAAGTAGGGTTAAATATAGAATATATACACACCAGCATTGAAGAGCTAAGCAA TGACAAGAAGTACGACGTGGTTCTGTTGATGGAAGTAGTTGAACATGTGGATAATTTAGAGCTTTTCATGAAAAAAGCGA TAGAACTGCTAAAACCGAATGGGCTGATATTTATATCCACAATAAATAGAACTATCAAATCCTTCTGCCTTGCAATAATT GGTGCAGAGTACATATTAAATTGGCTGCCAAAAGGTACACATAACTGGAATAAATTTCTCAAGCCGTCAGAAATTGCAAA TCACTTAAGAGAAAATAATGTAACGCTGCAAAACATGGCTGGTATGGAGTACAACGTAATAAAGCGTGAGTGGAATCTAA CTAAAGGAGTAGATGTTAATTATATACTTTGTGGTTTGTTAGATTTAACTCTATAA
Upstream 100 bases:
>100_bases AGGAAAACCTTAGCTATAGCTTTAGAACTCCCAAAAGGTCAGAAGCATTGAATGACTTGACAGAAAGTTCAAACCCATAT AAAATGTCCTTATTTCTTAT
Downstream 100 bases:
>100_bases AAGCACCATTTTCACTTCCAATACTTTGAAGGATCTTGGCCAGCTTTTATACAGTAGCCTTTATTAGTTAGCGCCCAACC GGAACGACAAGCATAACCTG
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MLGIVSIASDHSGYELKSEIKPYLEALGYRVVDQGCTAQQKCVDYPDYAVKVVEDITSKKANYGILICGTGLGMSTVANR FEGIYAALCNSVEIAKLAREHGNANVLCLGAGFTASGLAKDIVKQFLETEFSKESRHKKRLDKLSNITSKKKKTKTYNED EISKFAKMAGQWWDENGKFKPLHIMNPVRVSYIIEKIKELKKCNLKELSLLDVGCGGGILSESMARVGINVVGIDVCEEN IKVAHSHAKKVGLNIEYIHTSIEELSNDKKYDVVLLMEVVEHVDNLELFMKKAIELLKPNGLIFISTINRTIKSFCLAII GAEYILNWLPKGTHNWNKFLKPSEIANHLRENNVTLQNMAGMEYNVIKREWNLTKGVDVNYILCGLLDLTL
Sequences:
>Translated_391_residues MLGIVSIASDHSGYELKSEIKPYLEALGYRVVDQGCTAQQKCVDYPDYAVKVVEDITSKKANYGILICGTGLGMSTVANR FEGIYAALCNSVEIAKLAREHGNANVLCLGAGFTASGLAKDIVKQFLETEFSKESRHKKRLDKLSNITSKKKKTKTYNED EISKFAKMAGQWWDENGKFKPLHIMNPVRVSYIIEKIKELKKCNLKELSLLDVGCGGGILSESMARVGINVVGIDVCEEN IKVAHSHAKKVGLNIEYIHTSIEELSNDKKYDVVLLMEVVEHVDNLELFMKKAIELLKPNGLIFISTINRTIKSFCLAII GAEYILNWLPKGTHNWNKFLKPSEIANHLRENNVTLQNMAGMEYNVIKREWNLTKGVDVNYILCGLLDLTL >Mature_391_residues MLGIVSIASDHSGYELKSEIKPYLEALGYRVVDQGCTAQQKCVDYPDYAVKVVEDITSKKANYGILICGTGLGMSTVANR FEGIYAALCNSVEIAKLAREHGNANVLCLGAGFTASGLAKDIVKQFLETEFSKESRHKKRLDKLSNITSKKKKTKTYNED EISKFAKMAGQWWDENGKFKPLHIMNPVRVSYIIEKIKELKKCNLKELSLLDVGCGGGILSESMARVGINVVGIDVCEEN IKVAHSHAKKVGLNIEYIHTSIEELSNDKKYDVVLLMEVVEHVDNLELFMKKAIELLKPNGLIFISTINRTIKSFCLAII GAEYILNWLPKGTHNWNKFLKPSEIANHLRENNVTLQNMAGMEYNVIKREWNLTKGVDVNYILCGLLDLTL
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=236, Percent_Identity=38.5593220338983, Blast_Score=177, Evalue=1e-44, Organism=Escherichia coli, GI1788564, Length=228, Percent_Identity=42.9824561403509, Blast_Score=203, Evalue=2e-53, Organism=Escherichia coli, GI1790528, Length=147, Percent_Identity=36.0544217687075, Blast_Score=103, Evalue=2e-23, Organism=Caenorhabditis elegans, GI115533050, Length=232, Percent_Identity=34.4827586206897, Blast_Score=148, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6324476, Length=273, Percent_Identity=31.8681318681319, Blast_Score=122, Evalue=1e-28, Organism=Drosophila melanogaster, GI281365311, Length=251, Percent_Identity=31.0756972111554, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI24585589, Length=213, Percent_Identity=33.3333333333333, Blast_Score=134, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 43765; Mature: 43765
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGIVSIASDHSGYELKSEIKPYLEALGYRVVDQGCTAQQKCVDYPDYAVKVVEDITSKK CCEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCC ANYGILICGTGLGMSTVANRFEGIYAALCNSVEIAKLAREHGNANVLCLGAGFTASGLAK CCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCHHHHHH DIVKQFLETEFSKESRHKKRLDKLSNITSKKKKTKTYNEDEISKFAKMAGQWWDENGKFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCC PLHIMNPVRVSYIIEKIKELKKCNLKELSLLDVGCGGGILSESMARVGINVVGIDVCEEN EEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCEEEEEEHHHHH IKVAHSHAKKVGLNIEYIHTSIEELSNDKKYDVVLLMEVVEHVDNLELFMKKAIELLKPN HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLIFISTINRTIKSFCLAIIGAEYILNWLPKGTHNWNKFLKPSEIANHLRENNVTLQNMA CEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCHHHHC GMEYNVIKREWNLTKGVDVNYILCGLLDLTL CCEEEHHHHHCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MLGIVSIASDHSGYELKSEIKPYLEALGYRVVDQGCTAQQKCVDYPDYAVKVVEDITSKK CCEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCC ANYGILICGTGLGMSTVANRFEGIYAALCNSVEIAKLAREHGNANVLCLGAGFTASGLAK CCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCHHHHHH DIVKQFLETEFSKESRHKKRLDKLSNITSKKKKTKTYNEDEISKFAKMAGQWWDENGKFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCC PLHIMNPVRVSYIIEKIKELKKCNLKELSLLDVGCGGGILSESMARVGINVVGIDVCEEN EEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCEEEEEEHHHHH IKVAHSHAKKVGLNIEYIHTSIEELSNDKKYDVVLLMEVVEHVDNLELFMKKAIELLKPN HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLIFISTINRTIKSFCLAIIGAEYILNWLPKGTHNWNKFLKPSEIANHLRENNVTLQNMA CEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCHHHHC GMEYNVIKREWNLTKGVDVNYILCGLLDLTL CCEEEHHHHHCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA