| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630219
Identifier: 225630219
GI number: 225630219
Start: 456852
End: 457217
Strand: Reverse
Name: 225630219
Synonym: WRi_004250
Alternate gene names: NA
Gene position: 457217-456852 (Counterclockwise)
Preceding gene: 225630220
Following gene: 225630218
Centisome position: 31.62
GC content: 29.51
Gene sequence:
>366_bases ATGGATGTAACTCCCTTAATTTCCGAGAATAAAAATCTTATAAATGGTTACAGGGAAGGAAAATTTTTGGTGAATAATAG AGAATATTGCGGCTCAATTATAATTTTTCCTGAAAAGGTGATTAAATTGAAAGAAAGTGATATAAATAGCAAGGAACATT TTAAATCTTTTTTAACAGAGGAAATAGAAATTTTGATAATAGGTACTGGTAAAACACGCAATATACTAAGTTCTTCAGTG AAGTCCTATCTTATGGAACAAAAAGGTTTAAATTTTGAATTTATGACAACAGGTTCTGCATGCAGAACCCATAACGTTTT AATATCCGAAGATAGATTTGTTGTCAGTTATCTAATAGCCATATAG
Upstream 100 bases:
>100_bases AATATTCGATAGTGAGGAAAATGCAAAAGCTGCTGCAGTTAATATCGGAAAAAAGCAACCAGAATGGTGGGTATGTGACA CTCAATTAATAGTTTGACTT
Downstream 100 bases:
>100_bases CATGCTTACCCAGGACTTTTTCATCAATAGTCTAGTTGCAGTAGTTGTAATTAGCCTAGTAACAGGCGCTTTAGGATCGT TTATGATATGGCAAAGGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MDVTPLISENKNLINGYREGKFLVNNREYCGSIIIFPEKVIKLKESDINSKEHFKSFLTEEIEILIIGTGKTRNILSSSV KSYLMEQKGLNFEFMTTGSACRTHNVLISEDRFVVSYLIAI
Sequences:
>Translated_121_residues MDVTPLISENKNLINGYREGKFLVNNREYCGSIIIFPEKVIKLKESDINSKEHFKSFLTEEIEILIIGTGKTRNILSSSV KSYLMEQKGLNFEFMTTGSACRTHNVLISEDRFVVSYLIAI >Mature_121_residues MDVTPLISENKNLINGYREGKFLVNNREYCGSIIIFPEKVIKLKESDINSKEHFKSFLTEEIEILIIGTGKTRNILSSSV KSYLMEQKGLNFEFMTTGSACRTHNVLISEDRFVVSYLIAI
Specific function: Unknown
COG id: COG3737
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13812; Mature: 13812
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVTPLISENKNLINGYREGKFLVNNREYCGSIIIFPEKVIKLKESDINSKEHFKSFLTE CCCCCCCCCCCHHHCCCCCCEEEEECCCCCCEEEEEHHHHHHECCCCCCCHHHHHHHHHC EIEILIIGTGKTRNILSSSVKSYLMEQKGLNFEFMTTGSACRTHNVLISEDRFVVSYLIA CEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCHHHHHHHHC I C >Mature Secondary Structure MDVTPLISENKNLINGYREGKFLVNNREYCGSIIIFPEKVIKLKESDINSKEHFKSFLTE CCCCCCCCCCCHHHCCCCCCEEEEECCCCCCEEEEEHHHHHHECCCCCCCHHHHHHHHHC EIEILIIGTGKTRNILSSSVKSYLMEQKGLNFEFMTTGSACRTHNVLISEDRFVVSYLIA CEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCHHHHHHHHC I C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA