| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630215
Identifier: 225630215
GI number: 225630215
Start: 453537
End: 454571
Strand: Reverse
Name: 225630215
Synonym: WRi_004210
Alternate gene names: NA
Gene position: 454571-453537 (Counterclockwise)
Preceding gene: 225630216
Following gene: 225630214
Centisome position: 31.44
GC content: 34.49
Gene sequence:
>1035_bases ATGTTTGACATTTCAAAAATTGTAATAACACCTGAAATGTTAAAATTAGTTGCTGAAATTGATGAATTTAAAGGAGCATG GCAATTGTTTGGTAATTTAGCTCCAGAACGTTTACAAATGCTCAAGAAAATTGCAACAATTGAAAGTATTGGTTCTTCTA CTCGTATTGAAGGGGCAAGATTATCAGACCGTGAAGTTGAGCAATTACTATCCAAACTTGATACACGCTCATTTCGTTCT CTAGATGAACGAGAAATAGCCGGATATGCGTATGTGTGTGAAGAAGTATTTCAAAACTTTAACAAGATGCCATTTACAGA AAACACTATAAAACAGTTTCACATCTGGCTTTTACAATTTTCATATAAAGATCAAAGGCACATGGGAGAATATAAAAAAT CTCCCAATCATGTTGAGGCGTTTTATGAATCTGGAAAAAGCTTGGGCATAGTTTTTGAAACAGCCTCTCCGCTTGAGACA GCGACACAAATGCAAGAACTTATTTATTGGACTAGCCAACAATTAGAAGTAAAATCGTTACATCCTCTATTAATTATTGG CATTTTTATAGTTACTTTTTTAGCTATTCATCCCTTCCAGGATGGAAATGGCAGATTATCACGCATTCTCACAACTTTCT TGTTACTAAAGTTAGGGTATATCTATGTACCTTACAGTTCCCTTGAAAGTAATAAGGAGAGTTACTACTTAGCTTTGCGT CGTACTCAACAATCCTTGAAGACGAGCAGCAATGATTTTAATCCATGGCTTATGTTCTTTTTAAGGTCACTACAAAAGCA AAAATTTTATCTTGAACAAAAGGTGTCACATGAAAAAGTGTTAAATCTCTATTTACCACCACTTTCTGCTAAAGTATTAG CACTACTCAGCAAACATGGACGTCTTACAATTAAGGATTTGGAAAATATTACTAAAGCAAACTGCAATACCTTAAAGAAG CACGTATCTAATCTCGTAAAGAGTAATCACATCACTCAGCATGGAAAAGGCAAAGCAACCTGGTATGTAATATAG
Upstream 100 bases:
>100_bases TGCCTACCAAAATTCATTCTTTAGTGTGTGTCTCACAAGTATTCTTTGCTAATAGGATATTTTCGAATATAATTGAATAT AATTAGATAAAAATACAGAT
Downstream 100 bases:
>100_bases AGCTCAATAGGATATGTATTCATTTTGAATTGTTAAATTATTCAGCTATAGAATATAGATCACAGCTGTACAAACATTGT AGTTTGAGCCCACTAGATCC
Product: Fic family protein
Products: NA
Alternate protein names: Fic Family Protein; Fic Protein; Fic Protein Family; AsnC Family Regulatory Protein; Regulation Factor CAMP; Fic Family Protein; Filamentation Induced By Camp Protein Fic; Fic Family xin-Antitoxin System Toxin Component; Filamentation Induced By CAMP Protein Fic-Like Protein; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MFDISKIVITPEMLKLVAEIDEFKGAWQLFGNLAPERLQMLKKIATIESIGSSTRIEGARLSDREVEQLLSKLDTRSFRS LDEREIAGYAYVCEEVFQNFNKMPFTENTIKQFHIWLLQFSYKDQRHMGEYKKSPNHVEAFYESGKSLGIVFETASPLET ATQMQELIYWTSQQLEVKSLHPLLIIGIFIVTFLAIHPFQDGNGRLSRILTTFLLLKLGYIYVPYSSLESNKESYYLALR RTQQSLKTSSNDFNPWLMFFLRSLQKQKFYLEQKVSHEKVLNLYLPPLSAKVLALLSKHGRLTIKDLENITKANCNTLKK HVSNLVKSNHITQHGKGKATWYVI
Sequences:
>Translated_344_residues MFDISKIVITPEMLKLVAEIDEFKGAWQLFGNLAPERLQMLKKIATIESIGSSTRIEGARLSDREVEQLLSKLDTRSFRS LDEREIAGYAYVCEEVFQNFNKMPFTENTIKQFHIWLLQFSYKDQRHMGEYKKSPNHVEAFYESGKSLGIVFETASPLET ATQMQELIYWTSQQLEVKSLHPLLIIGIFIVTFLAIHPFQDGNGRLSRILTTFLLLKLGYIYVPYSSLESNKESYYLALR RTQQSLKTSSNDFNPWLMFFLRSLQKQKFYLEQKVSHEKVLNLYLPPLSAKVLALLSKHGRLTIKDLENITKANCNTLKK HVSNLVKSNHITQHGKGKATWYVI >Mature_344_residues MFDISKIVITPEMLKLVAEIDEFKGAWQLFGNLAPERLQMLKKIATIESIGSSTRIEGARLSDREVEQLLSKLDTRSFRS LDEREIAGYAYVCEEVFQNFNKMPFTENTIKQFHIWLLQFSYKDQRHMGEYKKSPNHVEAFYESGKSLGIVFETASPLET ATQMQELIYWTSQQLEVKSLHPLLIIGIFIVTFLAIHPFQDGNGRLSRILTTFLLLKLGYIYVPYSSLESNKESYYLALR RTQQSLKTSSNDFNPWLMFFLRSLQKQKFYLEQKVSHEKVLNLYLPPLSAKVLALLSKHGRLTIKDLENITKANCNTLKK HVSNLVKSNHITQHGKGKATWYVI
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39828; Mature: 39828
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDISKIVITPEMLKLVAEIDEFKGAWQLFGNLAPERLQMLKKIATIESIGSSTRIEGAR CCCCHHHEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC LSDREVEQLLSKLDTRSFRSLDEREIAGYAYVCEEVFQNFNKMPFTENTIKQFHIWLLQF CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC SYKDQRHMGEYKKSPNHVEAFYESGKSLGIVFETASPLETATQMQELIYWTSQQLEVKSL CCCHHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHC HPLLIIGIFIVTFLAIHPFQDGNGRLSRILTTFLLLKLGYIYVPYSSLESNKESYYLALR CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEECCHHHCCCCHHHHHHHH RTQQSLKTSSNDFNPWLMFFLRSLQKQKFYLEQKVSHEKVLNLYLPPLSAKVLALLSKHG HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC RLTIKDLENITKANCNTLKKHVSNLVKSNHITQHGKGKATWYVI CEEHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC >Mature Secondary Structure MFDISKIVITPEMLKLVAEIDEFKGAWQLFGNLAPERLQMLKKIATIESIGSSTRIEGAR CCCCHHHEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC LSDREVEQLLSKLDTRSFRSLDEREIAGYAYVCEEVFQNFNKMPFTENTIKQFHIWLLQF CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC SYKDQRHMGEYKKSPNHVEAFYESGKSLGIVFETASPLETATQMQELIYWTSQQLEVKSL CCCHHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHC HPLLIIGIFIVTFLAIHPFQDGNGRLSRILTTFLLLKLGYIYVPYSSLESNKESYYLALR CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEECCHHHCCCCHHHHHHHH RTQQSLKTSSNDFNPWLMFFLRSLQKQKFYLEQKVSHEKVLNLYLPPLSAKVLALLSKHG HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC RLTIKDLENITKANCNTLKKHVSNLVKSNHITQHGKGKATWYVI CEEHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA