| Definition | Wolbachia sp. wRi, complete genome. |
|---|---|
| Accession | NC_012416 |
| Length | 1,445,873 |
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The map label for this gene is 225630046
Identifier: 225630046
GI number: 225630046
Start: 219468
End: 219911
Strand: Reverse
Name: 225630046
Synonym: WRi_002150
Alternate gene names: NA
Gene position: 219911-219468 (Counterclockwise)
Preceding gene: 225630047
Following gene: 225630044
Centisome position: 15.21
GC content: 37.84
Gene sequence:
>444_bases ATGGCCTTTTCGAAATTTCTCGATCCAAAAAACAATTTCGCGTTCAAGAGAATATTTGGCACTGAGAAAAATAAAGATAT TCTCATTCACTTTCTCAATGATATATTGGGCTTCGCTGGCAAAGATGAAATAGAAGAAATAGAATTTCTCAGCACTATCA TGGATGCTGAGATTGCCTCTAAAAAACAAAGTATTATTGATGTTTTCTGTACTGATTCTGCTGGAACCCAGCTAATTATT GAAATGGTGCGACCTGAAAGTCTTCGGTCATATTGTTTAAAAGGAGAGGAATTCCTTCAGAAAGAAACTAAAAGAGTTCT AAAACTTATTAAACCAGATGTTTTGCCATCTGAGTCTACGCATCAGTGCGAATCGGGTAACCGGTTGGTGCCAAGCGATG CGGACAATGAACCTCCTCTTGAAAAAGAAGATGCTCAATCGTGA
Upstream 100 bases:
>100_bases AACGCAAACGTGCAGGAAGGGCAAAAAATAAGGAGTAATCAGAGGTTGAACATTTGCGAAAAATAGTGTATAATTATTCG TCTCCTAATTGTATTTAATT
Downstream 100 bases:
>100_bases AAGGAGCATAAACTACAAGCATCATGTGGTTGGAGAGCTAGGCTTAGTGGTATGGTGAACGTAAGTGAAGCTTCATAAGT ATCGTAACGATTAAAGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MAFSKFLDPKNNFAFKRIFGTEKNKDILIHFLNDILGFAGKDEIEEIEFLSTIMDAEIASKKQSIIDVFCTDSAGTQLII EMVRPESLRSYCLKGEEFLQKETKRVLKLIKPDVLPSESTHQCESGNRLVPSDADNEPPLEKEDAQS
Sequences:
>Translated_147_residues MAFSKFLDPKNNFAFKRIFGTEKNKDILIHFLNDILGFAGKDEIEEIEFLSTIMDAEIASKKQSIIDVFCTDSAGTQLII EMVRPESLRSYCLKGEEFLQKETKRVLKLIKPDVLPSESTHQCESGNRLVPSDADNEPPLEKEDAQS >Mature_146_residues AFSKFLDPKNNFAFKRIFGTEKNKDILIHFLNDILGFAGKDEIEEIEFLSTIMDAEIASKKQSIIDVFCTDSAGTQLIIE MVRPESLRSYCLKGEEFLQKETKRVLKLIKPDVLPSESTHQCESGNRLVPSDADNEPPLEKEDAQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16656; Mature: 16525
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFSKFLDPKNNFAFKRIFGTEKNKDILIHFLNDILGFAGKDEIEEIEFLSTIMDAEIAS CCCCHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH KKQSIIDVFCTDSAGTQLIIEMVRPESLRSYCLKGEEFLQKETKRVLKLIKPDVLPSEST HHHHHEEEEECCCCCHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC HQCESGNRLVPSDADNEPPLEKEDAQS CCCCCCCEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure AFSKFLDPKNNFAFKRIFGTEKNKDILIHFLNDILGFAGKDEIEEIEFLSTIMDAEIAS CCCHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH KKQSIIDVFCTDSAGTQLIIEMVRPESLRSYCLKGEEFLQKETKRVLKLIKPDVLPSEST HHHHHEEEEECCCCCHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC HQCESGNRLVPSDADNEPPLEKEDAQS CCCCCCCEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA