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The map label for this gene is atpC [H]

Identifier: 225630029

GI number: 225630029

Start: 196606

End: 196950

Strand: Direct

Name: atpC [H]

Synonym: WRi_001930

Alternate gene names: 225630029

Gene position: 196606-196950 (Clockwise)

Preceding gene: 225630028

Following gene: 225630030

Centisome position: 13.6

GC content: 31.01

Gene sequence:

>345_bases
ATGAATACTTTTAAAGTGCAATTTTTCTCTCCTGATGATCAAATTTCATTCAGTGGAGTGGTTTCTCTTTCAGTAACTGG
GCTCGAAGGGGAGCTTATGATTTTAGCTCACCATGCTTCTTACTTAATTTATTTATTGCCTGGTATGATTACTGTTAAAA
TGAGTAACCAAACAGAAAAGAAGGTTGTAATTGATAGTGGCGTATTAGAAGTTGCAAGTAATAATTGTAGCATTATAACA
AGTCAAATTCAGGTTTTTGATCGTGCAATTCATGATGAGAAATCTTTTAAAAATAAGAGAATTAGTATATATTTAAGTTA
TCTTGATGAGAAGTTTCTTTCTTAG

Upstream 100 bases:

>100_bases
TCACTTACCAGAGGCCGCTTTTTATATGGTGGGGAATATAGATGAAGCAATAAAAAAGGCTGAATTAATACAAGCTGAAG
CTAAGTAAAAGTTAAAGATT

Downstream 100 bases:

>100_bases
TTATTTTAGGCAAAAAGTCAATTATCATTCAAGTGGCTATAAGATTTTTGCTCAGGGGGCTCTTTTTTGTCACCCCAGAA
ACCCCGGGGTGTCATCCCAG

Product: ATP synthase F1, epsilon subunit, putative

Products: ATP; H+; H2O [C]

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit [H]

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MNTFKVQFFSPDDQISFSGVVSLSVTGLEGELMILAHHASYLIYLLPGMITVKMSNQTEKKVVIDSGVLEVASNNCSIIT
SQIQVFDRAIHDEKSFKNKRISIYLSYLDEKFLS

Sequences:

>Translated_114_residues
MNTFKVQFFSPDDQISFSGVVSLSVTGLEGELMILAHHASYLIYLLPGMITVKMSNQTEKKVVIDSGVLEVASNNCSIIT
SQIQVFDRAIHDEKSFKNKRISIYLSYLDEKFLS
>Mature_114_residues
MNTFKVQFFSPDDQISFSGVVSLSVTGLEGELMILAHHASYLIYLLPGMITVKMSNQTEKKVVIDSGVLEVASNNCSIIT
SQIQVFDRAIHDEKSFKNKRISIYLSYLDEKFLS

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001469
- InterPro:   IPR020546
- ProDom:   PD000944 [H]

Pfam domain/function: PF02823 ATP-synt_DE_N [H]

EC number: 3.6.3.14 [C]

Molecular weight: Translated: 12811; Mature: 12811

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTFKVQFFSPDDQISFSGVVSLSVTGLEGELMILAHHASYLIYLLPGMITVKMSNQTEK
CCEEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEECHHEEEEEECCEEEEEECCCCCE
KVVIDSGVLEVASNNCSIITSQIQVFDRAIHDEKSFKNKRISIYLSYLDEKFLS
EEEEECCEEEECCCCCEEEHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHCC
>Mature Secondary Structure
MNTFKVQFFSPDDQISFSGVVSLSVTGLEGELMILAHHASYLIYLLPGMITVKMSNQTEK
CCEEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEECHHEEEEEECCEEEEEECCCCCE
KVVIDSGVLEVASNNCSIITSQIQVFDRAIHDEKSFKNKRISIYLSYLDEKFLS
EEEEECCEEEECCCCCEEEHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ADP; H+; Phosphate [C]

Specific reaction: ADP + (4) H+ + Phosphate <==> ATP + (3) H+ + H2O [C]

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA