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The map label for this gene is 225629968

Identifier: 225629968

GI number: 225629968

Start: 116667

End: 117350

Strand: Reverse

Name: 225629968

Synonym: WRi_001140

Alternate gene names: NA

Gene position: 117350-116667 (Counterclockwise)

Preceding gene: 225629969

Following gene: 225629967

Centisome position: 8.12

GC content: 30.12

Gene sequence:

>684_bases
GTGTATAACGAAATAGAAGGAGAACTGTACAACGTAATTGTAAAAGAGTTTTCTGATCTTATTGATAAAATAAAAGAACA
CCCTTTTAATGTTGAATTGATAAATAATACATTAGATTATGAAAAATTCAAATTCTACCTTCAGCAGGATTTTCTGTATT
GTATAGATTGCGCTCGTGCTTTTTTAATTGTTCCAGCTAGAGTTGATGATATTGAAATGATGAGTAGTTTAATCAATTTG
GCACAAGGAGCATTTTATGTTCGAGAACAGTATAAAAAATATTTTGAAGATTGTGATCTATCTGATGATCACAAAAAGTC
AAGAGCTTGTTCTGCCTTTACTGACTTTTTCATGAGTGCCGCATATCACAATTCTGTTAATGAAGCTTTAGTAGCATCTT
ATTCTTGCTTTAACATATACCAAATCGTTATACGCCATATGGTAAATGAGATAACAACTAAAGGGGTTAAAAATAACAAA
TACAAAGAGTGGATCAACATTTATAGTAGCGAAACAGTAAATGCTGTAATTGATGAGATTACTGATATTACAAATAAGCT
ATATAAAAAAGCTAGTGACTGTGAAAAAAAGAGGATGTATGAGTTTTTTAAGAAAGGGCTGGAATTAGAAATAATGTTTT
GGGATGAGGCATATTACTCTAATATATCTAGCAAAGAATATTAG

Upstream 100 bases:

>100_bases
ATATACTAGCTTATTGTTAAAGCATAGCACGCTTTTTCATAATAATTATACCACATTAGTAATAATTTTTATATTCAATT
TTTATTGTGAGGCTTATAAA

Downstream 100 bases:

>100_bases
CAGCGGATTATTTACGTTAACTTGATCTTTTATCGGTAACTACAGTGTTCAGTGGCATAATTAGGAGCTGTTACGGGTCA
AATCTTTTAAAGGATATAAT

Product: transcriptional activator, tenA family, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MYNEIEGELYNVIVKEFSDLIDKIKEHPFNVELINNTLDYEKFKFYLQQDFLYCIDCARAFLIVPARVDDIEMMSSLINL
AQGAFYVREQYKKYFEDCDLSDDHKKSRACSAFTDFFMSAAYHNSVNEALVASYSCFNIYQIVIRHMVNEITTKGVKNNK
YKEWINIYSSETVNAVIDEITDITNKLYKKASDCEKKRMYEFFKKGLELEIMFWDEAYYSNISSKEY

Sequences:

>Translated_227_residues
MYNEIEGELYNVIVKEFSDLIDKIKEHPFNVELINNTLDYEKFKFYLQQDFLYCIDCARAFLIVPARVDDIEMMSSLINL
AQGAFYVREQYKKYFEDCDLSDDHKKSRACSAFTDFFMSAAYHNSVNEALVASYSCFNIYQIVIRHMVNEITTKGVKNNK
YKEWINIYSSETVNAVIDEITDITNKLYKKASDCEKKRMYEFFKKGLELEIMFWDEAYYSNISSKEY
>Mature_227_residues
MYNEIEGELYNVIVKEFSDLIDKIKEHPFNVELINNTLDYEKFKFYLQQDFLYCIDCARAFLIVPARVDDIEMMSSLINL
AQGAFYVREQYKKYFEDCDLSDDHKKSRACSAFTDFFMSAAYHNSVNEALVASYSCFNIYQIVIRHMVNEITTKGVKNNK
YKEWINIYSSETVNAVIDEITDITNKLYKKASDCEKKRMYEFFKKGLELEIMFWDEAYYSNISSKEY

Specific function: Unknown

COG id: COG0819

COG function: function code K; Putative transcription activator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thiaminase-2 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6324517, Length=197, Percent_Identity=22.3350253807107, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016084
- InterPro:   IPR004305 [H]

Pfam domain/function: PF03070 TENA_THI-4 [H]

EC number: NA

Molecular weight: Translated: 26924; Mature: 26924

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNEIEGELYNVIVKEFSDLIDKIKEHPFNVELINNTLDYEKFKFYLQQDFLYCIDCARA
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
FLIVPARVDDIEMMSSLINLAQGAFYVREQYKKYFEDCDLSDDHKKSRACSAFTDFFMSA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
AYHNSVNEALVASYSCFNIYQIVIRHMVNEITTKGVKNNKYKEWINIYSSETVNAVIDEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
TDITNKLYKKASDCEKKRMYEFFKKGLELEIMFWDEAYYSNISSKEY
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHCCCCCCCC
>Mature Secondary Structure
MYNEIEGELYNVIVKEFSDLIDKIKEHPFNVELINNTLDYEKFKFYLQQDFLYCIDCARA
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
FLIVPARVDDIEMMSSLINLAQGAFYVREQYKKYFEDCDLSDDHKKSRACSAFTDFFMSA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
AYHNSVNEALVASYSCFNIYQIVIRHMVNEITTKGVKNNKYKEWINIYSSETVNAVIDEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
TDITNKLYKKASDCEKKRMYEFFKKGLELEIMFWDEAYYSNISSKEY
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]