Click here to switch to the map view.

The map label for this gene is rex

Identifier: 222527158

GI number: 222527158

Start: 4891381

End: 4892019

Strand: Direct

Name: rex

Synonym: Chy400_3940

Alternate gene names: 222527158

Gene position: 4891381-4892019 (Clockwise)

Preceding gene: 222527144

Following gene: 222527159

Centisome position: 92.83

GC content: 55.56

Gene sequence:

>639_bases
GTGGAGCGTTCTGATCTACCACCAGATGTTGTCATTCGGCGGCTTCCCCTCTATGCACGGAGTCTGCGTTACCTGCTTGA
AGAGGGTGTCCACTCTGTATCGTCGCAAGAATTAGGAGAACGGATCAACGTCACTGCGGCCCAAATCCGCAAAGACCTCT
CATATTTCGGTGAATTTGGCAAACAGGGTATTGGCTACGATGTCGAGAAGCTGCTTCAGCACATCGAACGTATTCTCGGC
TTACATCACCACTGGCCGGTAGCACTCGTCGGTATCGGCTTGCTGGGCCAGGCCATTGCCCGCTACGAAGGCTTCCGCAC
CGAAGGAATTGAGATCGTTGCTCTCTTTGACTCCGATCCGGCCAAAATTGGTCAGAAGATCGGCGATCTCACGATTCAGG
ATTTCGCCCACGTGCGACGCATCATCGCCGAGAAGCAGATCAAGATGGCGATTATTGCTGTGCCTGCCCAACAGGCACAG
CGCGTTGCCGATGTCCTGGTCGAGGCGGGTATCCGGGCGATTCTGAGCTACGCGCCGATGATCCTGCAAGTCCCCGAAGA
TGTCTGGGTGCGCTACATCGATCCGGTCGCGGTACTGCAAAGCATGACCTACTACCTGGCTCGCGAGCAGGAACATTGA

Upstream 100 bases:

>100_bases
ACCTGCAAAATACACAAAAGAAAAACGCTTGCAGAACTGTCATGCTTGTGCTACACTTCACATACTTCACCCGATCCACC
CGATCCAATGGAGGAGTTGC

Downstream 100 bases:

>100_bases
CAGAACACCGCTAACCTGGCGGGCATAGTGAACAGGGCGAAGGGGCTTCGCCCTGTTTTTTGCTACCAGAACTTACTTCA
TGCATCCGTATAATCTCACC

Product: redox-sensing transcriptional repressor Rex

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MERSDLPPDVVIRRLPLYARSLRYLLEEGVHSVSSQELGERINVTAAQIRKDLSYFGEFGKQGIGYDVEKLLQHIERILG
LHHHWPVALVGIGLLGQAIARYEGFRTEGIEIVALFDSDPAKIGQKIGDLTIQDFAHVRRIIAEKQIKMAIIAVPAQQAQ
RVADVLVEAGIRAILSYAPMILQVPEDVWVRYIDPVAVLQSMTYYLAREQEH

Sequences:

>Translated_212_residues
MERSDLPPDVVIRRLPLYARSLRYLLEEGVHSVSSQELGERINVTAAQIRKDLSYFGEFGKQGIGYDVEKLLQHIERILG
LHHHWPVALVGIGLLGQAIARYEGFRTEGIEIVALFDSDPAKIGQKIGDLTIQDFAHVRRIIAEKQIKMAIIAVPAQQAQ
RVADVLVEAGIRAILSYAPMILQVPEDVWVRYIDPVAVLQSMTYYLAREQEH
>Mature_212_residues
MERSDLPPDVVIRRLPLYARSLRYLLEEGVHSVSSQELGERINVTAAQIRKDLSYFGEFGKQGIGYDVEKLLQHIERILG
LHHHWPVALVGIGLLGQAIARYEGFRTEGIEIVALFDSDPAKIGQKIGDLTIQDFAHVRRIIAEKQIKMAIIAVPAQQAQ
RVADVLVEAGIRAILSYAPMILQVPEDVWVRYIDPVAVLQSMTYYLAREQEH

Specific function: Modulates transcription in response to changes in cellular NADH/NAD(+) redox state

COG id: COG2344

COG function: function code R; AT-rich DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory rex family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): REX_CHLAA (A9WB43)

Other databases:

- EMBL:   CP000909
- RefSeq:   YP_001637225.1
- ProteinModelPortal:   A9WB43
- SMR:   A9WB43
- GeneID:   5825460
- GenomeReviews:   CP000909_GR
- KEGG:   cau:Caur_3653
- HOGENOM:   HBG482264
- OMA:   TRGVGYD
- ProtClustDB:   PRK05472
- GO:   GO:0005737
- GO:   GO:0006350
- HAMAP:   MF_01131
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR009718
- InterPro:   IPR022876
- InterPro:   IPR011991
- Gene3D:   G3DSA:3.40.50.720
- Gene3D:   G3DSA:1.10.10.10
- SMART:   SM00881

Pfam domain/function: PF02629 CoA_binding; PF06971 Put_DNA-bind_N

EC number: NA

Molecular weight: Translated: 23918; Mature: 23918

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERSDLPPDVVIRRLPLYARSLRYLLEEGVHSVSSQELGERINVTAAQIRKDLSYFGEFG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KQGIGYDVEKLLQHIERILGLHHHWPVALVGIGLLGQAIARYEGFRTEGIEIVALFDSDP
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCH
AKIGQKIGDLTIQDFAHVRRIIAEKQIKMAIIAVPAQQAQRVADVLVEAGIRAILSYAPM
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHH
ILQVPEDVWVRYIDPVAVLQSMTYYLAREQEH
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MERSDLPPDVVIRRLPLYARSLRYLLEEGVHSVSSQELGERINVTAAQIRKDLSYFGEFG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KQGIGYDVEKLLQHIERILGLHHHWPVALVGIGLLGQAIARYEGFRTEGIEIVALFDSDP
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCH
AKIGQKIGDLTIQDFAHVRRIIAEKQIKMAIIAVPAQQAQRVADVLVEAGIRAILSYAPM
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHH
ILQVPEDVWVRYIDPVAVLQSMTYYLAREQEH
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA