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The map label for this gene is rutD [H]

Identifier: 222527134

GI number: 222527134

Start: 4865994

End: 4867061

Strand: Direct

Name: rutD [H]

Synonym: Chy400_3916

Alternate gene names: 222527134

Gene position: 4865994-4867061 (Clockwise)

Preceding gene: 222527133

Following gene: 222527135

Centisome position: 92.35

GC content: 60.11

Gene sequence:

>1068_bases
ATGAGCAAGATTCCAACATTACCCGGTATCACTTCGACGATGGTGGCAACCAGTCGTTTGCAGATGCATGTTTTGAGCAG
TGGCCCGGCTGACGGCGAAGCGGTGCTGTTCATCCACGGTAATGCCTCGTCGGCCACATTCTGGGAAGAGACGATGCTGG
CGTTGCCGGCACAATTTCGCGCGATTGCGCCCGATCTGCGCGGTTACGGTGAGACCGAGGATTTGCTGATCGATGCGACC
CGTGGCTGCGGTGACTGGGTTGACGATCTGATCGCCTTGATCGATACCCTCGGCATTGATCGCTGCCACGCGGTGGGGCA
TTCACTGGGTGGTGTGGTGCTGTTCAATCTCATCGCGGCTGTGCCGCAACGTATCATCACGGCCACCCTGGTAGCACCTG
GTTCGCCTTACGGTTTTGGTGGTTGCAAAGGGCTAAACGGCGAGCTGTGCTGGCCAGATGGTGCCGGATCGGGTGGCGGC
ACGGTCAATCAAGCCTTCGTGGAGCGTATGGCTGCCGGCGATACTACCGAAGAGGCAGGCAACGCAGCCCCCAGAGTTGT
CATGAACACGTTCTACTGGAAACCACCGTTCCGCCCGGCCCGCGAAGAGGCATTGCTGGCCTCGATGCTAAGTGAGAAGG
TGGGACCGCAGCGTTACCCCGGCGATTTCAAGCCATCGCCGCACTGGCCGGGTGTCGCACCGGGGGTCTGGGGACCAATC
AATGCCATTTCACCCCTCTACGTTGGAGATGCGGTCGAGCGTTTTGTGGCTGCGGAGCCGAAGCCCCCTATCTTGTGGGT
GCGTGGTGCTGATGACCAGATCGTGAGCGATATGTCGCTCTTCGATGTTGGTACGCTCGGTCAACTCGGCATCTTACCCG
ATTGGCCCGGCGCCGATGCCCATCCTCCGCAACCGATGATCGGGCAAACGCGCGCTGTGCTGGAGCGCTACGCCGCCGCC
GGTGGCCGCTTCCGTGAGCTGGTCTTCGCCGAATGTGGTCATACGCCGTACATTGAGCATCCTGACCAGTTCAACGCTGC
ATTCCACGATCACCTGCGTAACAGGTAA

Upstream 100 bases:

>100_bases
GTCACCCTCGCTGAATTACCGAAGACCGGTGCCGGCAAGATTGATAAGCAGGCTATCAAACACATGTTTCAGCAGTTGCA
GGTATGAAGCGGAGAACGCT

Downstream 100 bases:

>100_bases
CAGGCTTGAGCGGGAAAGTGAGAAAGCTATGCCAGTTATCCAGGCCGGAGATATTGAGGTTCACTACCTTGACGTTGGTG
AAGGCGAGCCGATTATCTTC

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MSKIPTLPGITSTMVATSRLQMHVLSSGPADGEAVLFIHGNASSATFWEETMLALPAQFRAIAPDLRGYGETEDLLIDAT
RGCGDWVDDLIALIDTLGIDRCHAVGHSLGGVVLFNLIAAVPQRIITATLVAPGSPYGFGGCKGLNGELCWPDGAGSGGG
TVNQAFVERMAAGDTTEEAGNAAPRVVMNTFYWKPPFRPAREEALLASMLSEKVGPQRYPGDFKPSPHWPGVAPGVWGPI
NAISPLYVGDAVERFVAAEPKPPILWVRGADDQIVSDMSLFDVGTLGQLGILPDWPGADAHPPQPMIGQTRAVLERYAAA
GGRFRELVFAECGHTPYIEHPDQFNAAFHDHLRNR

Sequences:

>Translated_355_residues
MSKIPTLPGITSTMVATSRLQMHVLSSGPADGEAVLFIHGNASSATFWEETMLALPAQFRAIAPDLRGYGETEDLLIDAT
RGCGDWVDDLIALIDTLGIDRCHAVGHSLGGVVLFNLIAAVPQRIITATLVAPGSPYGFGGCKGLNGELCWPDGAGSGGG
TVNQAFVERMAAGDTTEEAGNAAPRVVMNTFYWKPPFRPAREEALLASMLSEKVGPQRYPGDFKPSPHWPGVAPGVWGPI
NAISPLYVGDAVERFVAAEPKPPILWVRGADDQIVSDMSLFDVGTLGQLGILPDWPGADAHPPQPMIGQTRAVLERYAAA
GGRFRELVFAECGHTPYIEHPDQFNAAFHDHLRNR
>Mature_354_residues
SKIPTLPGITSTMVATSRLQMHVLSSGPADGEAVLFIHGNASSATFWEETMLALPAQFRAIAPDLRGYGETEDLLIDATR
GCGDWVDDLIALIDTLGIDRCHAVGHSLGGVVLFNLIAAVPQRIITATLVAPGSPYGFGGCKGLNGELCWPDGAGSGGGT
VNQAFVERMAAGDTTEEAGNAAPRVVMNTFYWKPPFRPAREEALLASMLSEKVGPQRYPGDFKPSPHWPGVAPGVWGPIN
AISPLYVGDAVERFVAAEPKPPILWVRGADDQIVSDMSLFDVGTLGQLGILPDWPGADAHPPQPMIGQTRAVLERYAAAG
GRFRELVFAECGHTPYIEHPDQFNAAFHDHLRNR

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 37942; Mature: 37811

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIPTLPGITSTMVATSRLQMHVLSSGPADGEAVLFIHGNASSATFWEETMLALPAQFR
CCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH
AIAPDLRGYGETEDLLIDATRGCGDWVDDLIALIDTLGIDRCHAVGHSLGGVVLFNLIAA
HHCHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
VPQRIITATLVAPGSPYGFGGCKGLNGELCWPDGAGSGGGTVNQAFVERMAAGDTTEEAG
HHHHHHHHHEECCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHC
NAAPRVVMNTFYWKPPFRPAREEALLASMLSEKVGPQRYPGDFKPSPHWPGVAPGVWGPI
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
NAISPLYVGDAVERFVAAEPKPPILWVRGADDQIVSDMSLFDVGTLGQLGILPDWPGADA
HHCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
HPPQPMIGQTRAVLERYAAAGGRFRELVFAECGHTPYIEHPDQFNAAFHDHLRNR
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKIPTLPGITSTMVATSRLQMHVLSSGPADGEAVLFIHGNASSATFWEETMLALPAQFR
CCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH
AIAPDLRGYGETEDLLIDATRGCGDWVDDLIALIDTLGIDRCHAVGHSLGGVVLFNLIAA
HHCHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
VPQRIITATLVAPGSPYGFGGCKGLNGELCWPDGAGSGGGTVNQAFVERMAAGDTTEEAG
HHHHHHHHHEECCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHC
NAAPRVVMNTFYWKPPFRPAREEALLASMLSEKVGPQRYPGDFKPSPHWPGVAPGVWGPI
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
NAISPLYVGDAVERFVAAEPKPPILWVRGADDQIVSDMSLFDVGTLGQLGILPDWPGADA
HHCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
HPPQPMIGQTRAVLERYAAAGGRFRELVFAECGHTPYIEHPDQFNAAFHDHLRNR
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA