Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222527020

Identifier: 222527020

GI number: 222527020

Start: 4731027

End: 4731455

Strand: Reverse

Name: 222527020

Synonym: Chy400_3799

Alternate gene names: NA

Gene position: 4731455-4731027 (Counterclockwise)

Preceding gene: 222527021

Following gene: 222527019

Centisome position: 89.8

GC content: 64.57

Gene sequence:

>429_bases
ATGGAGAAACAGAAGCGCAAACCAGGCCGTTCCGACGTTTCCGGTTTGAAATGGGCAATCAGCACTGCGGCATTCGCGGT
AACGATTGGCGGATGGGGGTGGCTGGCGGCGCAGAACCCGCCAGAGGTTGCTGCCGGTGAGCCGATGATAACCATTGTCC
CACCCTCTGTTGCCTATCAACCACTCCCGGACTGGTTAAGCCAATCACCGGCGTTGCCGGTGTTGCCGACCGTGGCACCA
CTCAATGTTCCAGATATGCCGGCACGTCAGCCTGCGGCTCAACCAGCCCCAGCAGCCGCTCCGGCTCCAGCAGTCGCTCC
GGCTCCGGCAGCCGCTCCGGCTCCGGCTCAACCGGCCCTGCGTGAGGTGACCGTACCGGCACCGGCGCCTCGTCCGGCAC
CCGTCGCGCGTACTCGTTCATCGCGTTGA

Upstream 100 bases:

>100_bases
TCTGCGATGGGTGTGGTTTGAGTAATTGGTATAGGTTCGCATTGTCTTGACGTGTAGCACTACCATCTCGCTCAGGCCAC
ACCACAAAAGGAGAGACGTT

Downstream 100 bases:

>100_bases
TACGGAGACAGCTATGCAGCAGATCAGTTTTCGGGCGATGGGTTCGACGATCACCATTATCGTGGATAGTGCCGATCCAA
CCGCCCGCAGTGCGCTTACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MEKQKRKPGRSDVSGLKWAISTAAFAVTIGGWGWLAAQNPPEVAAGEPMITIVPPSVAYQPLPDWLSQSPALPVLPTVAP
LNVPDMPARQPAAQPAPAAAPAPAVAPAPAAAPAPAQPALREVTVPAPAPRPAPVARTRSSR

Sequences:

>Translated_142_residues
MEKQKRKPGRSDVSGLKWAISTAAFAVTIGGWGWLAAQNPPEVAAGEPMITIVPPSVAYQPLPDWLSQSPALPVLPTVAP
LNVPDMPARQPAAQPAPAAAPAPAVAPAPAAAPAPAQPALREVTVPAPAPRPAPVARTRSSR
>Mature_142_residues
MEKQKRKPGRSDVSGLKWAISTAAFAVTIGGWGWLAAQNPPEVAAGEPMITIVPPSVAYQPLPDWLSQSPALPVLPTVAP
LNVPDMPARQPAAQPAPAAAPAPAVAPAPAAAPAPAQPALREVTVPAPAPRPAPVARTRSSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14500; Mature: 14500

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKQKRKPGRSDVSGLKWAISTAAFAVTIGGWGWLAAQNPPEVAAGEPMITIVPPSVAYQ
CCCCCCCCCCCCCCHHHHHHHCEEEEEEECCCEEECCCCCCCCCCCCCEEEEECCCCCCC
PLPDWLSQSPALPVLPTVAPLNVPDMPARQPAAQPAPAAAPAPAVAPAPAAAPAPAQPAL
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
REVTVPAPAPRPAPVARTRSSR
CEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEKQKRKPGRSDVSGLKWAISTAAFAVTIGGWGWLAAQNPPEVAAGEPMITIVPPSVAYQ
CCCCCCCCCCCCCCHHHHHHHCEEEEEEECCCEEECCCCCCCCCCCCCEEEEECCCCCCC
PLPDWLSQSPALPVLPTVAPLNVPDMPARQPAAQPAPAAAPAPAVAPAPAAAPAPAQPAL
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
REVTVPAPAPRPAPVARTRSSR
CEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA