| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526938
Identifier: 222526938
GI number: 222526938
Start: 4635637
End: 4636878
Strand: Reverse
Name: 222526938
Synonym: Chy400_3716
Alternate gene names: NA
Gene position: 4636878-4635637 (Counterclockwise)
Preceding gene: 222526939
Following gene: 222526937
Centisome position: 88.0
GC content: 50.72
Gene sequence:
>1242_bases ATGAAGACACCGATAGCATACCATCCACAACGGAGAGAGGTCCTGCCGTTCGATGCGCCACTCCCGCAAGAGGTTTTGAA TATTGCTACCAGATCGCGAAAAAACCTTCTACCATGGCGTGGTCAGTTCTCCCCCCAACTCGTGGAGGTACTGTTGCAGT CATACGCTCCCCAGGGTGGAACGGTTCTCGATCCCTGCATGGGAAGTGGAACTGTGTTGTACGAAGCTGCTCATCTAGGG TCACCCGTTTACGGTATTGACGTTAATCCTGCGGCTTACGTACTTGCCCGGCTTTACGAGTGCTGCACACTGCCGGTGGC TGAACGATATAATCTTGTGCGTAACGCAGAAGACCTGCTCGCACGGGCGCATCCGAACGCTTTTGTGATGCCGTTGTTCA GACACCCTACTCATCAACAGATGCATAGTTTCGATTGGGTGCGGACAATTCCAGATGTTCAGATAAGAATTCTGCTCGAC GCTCTTGTTGTCATGCTCAATGGGGATGCATCTGATGAGAATGCACTTCACCAGGCATGGACATCGGTCCGTCGCATTAT TCTGAACCTACCTTACAGTAAGACGCCGATCAAAGCGCTATTTGGCGACGCTCGCCGAATAGACCTTCCCGACGAATCGG TTGATTTCGTACTCTCTTCGCCGCCCTACTTGAACGTGTTCAATTATCACCACAACGCCCGGACCGGTATCGAGGTACTC GGTTGGAATCCATTGGTTGCTGGACAATCAGAAATCGGTGCCAATCGGAAATTCAGGCAAAATCGTTTTTTAACGGTCGT CCAGTATTGTATTGATATAGCGCTCATGCTTGCCGAGATATGCCGTGTGGGCAGGAGAGCTGCTCGCATTATTCTTGTCC TCGGACGGGAGTCACGTGTGCAAAAGACCCCCTTTGCTAACGGTTACATTGTCGAGCAGATTGCGGTTCGTGCACTGGGC ATGCATATCCATTTGAAGCAGGAACGTTTTTTCAGTAACAGATTTGGGCAACGAATCTATGAAGATATTCTCCATCTCAC CCCGCCTTCGGATCGGAAACTACCCTCGCAAGACCTGCTCATCCAACAGGCACGTTCCATTGCCGGTGAGGTTCTGAATG AAGCGCTTGAGCGTACTCCCGCTGACCGGAGGATATTTCTCGCTGATGCAATAAACCGCCTTTCTGAGATACTTCCATCA CCAGTGTTGGATCCAACGAGAATCAGAGAAGTACCGTTATGA
Upstream 100 bases:
>100_bases GCAGAATATGAATTTGCTGCTGGGGTTTGCTGAGACGGTGGGGTTGATGGGGTAGGGGCAGGTTATATGTCTACCTGCCC TGTACAGCGACGCTGAAACT
Downstream 100 bases:
>100_bases TGTATCCTGCTCCGCATGGCAATAAGTTACGTGCTCTTTTACAGAATGAAAAGTTACCATCTGGTGACAGAGATCGCATT GAACGAGCTATTAGTCGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MKTPIAYHPQRREVLPFDAPLPQEVLNIATRSRKNLLPWRGQFSPQLVEVLLQSYAPQGGTVLDPCMGSGTVLYEAAHLG SPVYGIDVNPAAYVLARLYECCTLPVAERYNLVRNAEDLLARAHPNAFVMPLFRHPTHQQMHSFDWVRTIPDVQIRILLD ALVVMLNGDASDENALHQAWTSVRRIILNLPYSKTPIKALFGDARRIDLPDESVDFVLSSPPYLNVFNYHHNARTGIEVL GWNPLVAGQSEIGANRKFRQNRFLTVVQYCIDIALMLAEICRVGRRAARIILVLGRESRVQKTPFANGYIVEQIAVRALG MHIHLKQERFFSNRFGQRIYEDILHLTPPSDRKLPSQDLLIQQARSIAGEVLNEALERTPADRRIFLADAINRLSEILPS PVLDPTRIREVPL
Sequences:
>Translated_413_residues MKTPIAYHPQRREVLPFDAPLPQEVLNIATRSRKNLLPWRGQFSPQLVEVLLQSYAPQGGTVLDPCMGSGTVLYEAAHLG SPVYGIDVNPAAYVLARLYECCTLPVAERYNLVRNAEDLLARAHPNAFVMPLFRHPTHQQMHSFDWVRTIPDVQIRILLD ALVVMLNGDASDENALHQAWTSVRRIILNLPYSKTPIKALFGDARRIDLPDESVDFVLSSPPYLNVFNYHHNARTGIEVL GWNPLVAGQSEIGANRKFRQNRFLTVVQYCIDIALMLAEICRVGRRAARIILVLGRESRVQKTPFANGYIVEQIAVRALG MHIHLKQERFFSNRFGQRIYEDILHLTPPSDRKLPSQDLLIQQARSIAGEVLNEALERTPADRRIFLADAINRLSEILPS PVLDPTRIREVPL >Mature_413_residues MKTPIAYHPQRREVLPFDAPLPQEVLNIATRSRKNLLPWRGQFSPQLVEVLLQSYAPQGGTVLDPCMGSGTVLYEAAHLG SPVYGIDVNPAAYVLARLYECCTLPVAERYNLVRNAEDLLARAHPNAFVMPLFRHPTHQQMHSFDWVRTIPDVQIRILLD ALVVMLNGDASDENALHQAWTSVRRIILNLPYSKTPIKALFGDARRIDLPDESVDFVLSSPPYLNVFNYHHNARTGIEVL GWNPLVAGQSEIGANRKFRQNRFLTVVQYCIDIALMLAEICRVGRRAARIILVLGRESRVQKTPFANGYIVEQIAVRALG MHIHLKQERFFSNRFGQRIYEDILHLTPPSDRKLPSQDLLIQQARSIAGEVLNEALERTPADRRIFLADAINRLSEILPS PVLDPTRIREVPL
Specific function: Unknown
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46787; Mature: 46787
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPIAYHPQRREVLPFDAPLPQEVLNIATRSRKNLLPWRGQFSPQLVEVLLQSYAPQGG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC TVLDPCMGSGTVLYEAAHLGSPVYGIDVNPAAYVLARLYECCTLPVAERYNLVRNAEDLL CEECCCCCCCEEEEEHHHCCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHH ARAHPNAFVMPLFRHPTHQQMHSFDWVRTIPDVQIRILLDALVVMLNGDASDENALHQAW HHCCCCEEEEHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH TSVRRIILNLPYSKTPIKALFGDARRIDLPDESVDFVLSSPPYLNVFNYHHNARTGIEVL HHHHHHHHCCCCCCCCHHHHHCCCEECCCCCCCCCEEECCCCEEEEEECCCCCCCCCEEE GWNPLVAGQSEIGANRKFRQNRFLTVVQYCIDIALMLAEICRVGRRAARIILVLGRESRV CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCC QKTPFANGYIVEQIAVRALGMHIHLKQERFFSNRFGQRIYEDILHLTPPSDRKLPSQDLL CCCCCCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH IQQARSIAGEVLNEALERTPADRRIFLADAINRLSEILPSPVLDPTRIREVPL HHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCHHHHCCCCC >Mature Secondary Structure MKTPIAYHPQRREVLPFDAPLPQEVLNIATRSRKNLLPWRGQFSPQLVEVLLQSYAPQGG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC TVLDPCMGSGTVLYEAAHLGSPVYGIDVNPAAYVLARLYECCTLPVAERYNLVRNAEDLL CEECCCCCCCEEEEEHHHCCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHH ARAHPNAFVMPLFRHPTHQQMHSFDWVRTIPDVQIRILLDALVVMLNGDASDENALHQAW HHCCCCEEEEHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH TSVRRIILNLPYSKTPIKALFGDARRIDLPDESVDFVLSSPPYLNVFNYHHNARTGIEVL HHHHHHHHCCCCCCCCHHHHHCCCEECCCCCCCCCEEECCCCEEEEEECCCCCCCCCEEE GWNPLVAGQSEIGANRKFRQNRFLTVVQYCIDIALMLAEICRVGRRAARIILVLGRESRV CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCC QKTPFANGYIVEQIAVRALGMHIHLKQERFFSNRFGQRIYEDILHLTPPSDRKLPSQDLL CCCCCCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH IQQARSIAGEVLNEALERTPADRRIFLADAINRLSEILPSPVLDPTRIREVPL HHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA