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The map label for this gene is atpH

Identifier: 222526523

GI number: 222526523

Start: 4100699

End: 4101172

Strand: Reverse

Name: atpH

Synonym: Chy400_3290

Alternate gene names: 222526523

Gene position: 4101172-4100699 (Counterclockwise)

Preceding gene: 222526524

Following gene: 222526522

Centisome position: 77.84

GC content: 58.86

Gene sequence:

>474_bases
ATGGCAACGACCATTGACGCACGAGCGCTGGCTGCGCCGCTGGTAGAGGCGCTCTTAACAACGGCCGCTGAACAGATACG
CGCTGCTGCTCCACGCATTGCCGGTCTTTCAGCCAGCGAGGCAGCCGCCGTCTTGCCGGCCGACCTGCTGCCACAGGTGC
GCAATTTCTTGCTCACCATGGCTAAAGAGGGGCTGACCGGTGAACTTAATGCGGTGGCCGCTGCTCTGCCGGGGTATCTT
GAAACCGGTAGCCGCGCAGTTGATGCCAGTGTCACCAGCGCGATTGAGCTGAGCGCCGAGCAGAAAGAGCGGATTACCCG
CGAATTGCAGCAGCGCTACGGCGATGTCCATGTCACATATCATGTCGATCCAACGTTGATTGGTGGTTTGATTATTCGGG
TTGGCGATCAGGTGCTTGATAATAGCCTGCGTGCCCGCCTGAGCGCCATTCAGCGTGTGTTACAGGCAAGTTAG

Upstream 100 bases:

>100_bases
TGGTCACGATGCTCTGATTGCTGAGTCGCTGGCAGCACTGGATCGCCGCAACTAACGTCGCAGACTGGCAGGTGCCTGGT
TTGCGTGAGGAAACGAGAGT

Downstream 100 bases:

>100_bases
AGTCCAGCTCGCTGGCCCGGTATCGCCGGCTACCAGCGCGACGGAGTAGAGCATGACGACGATTACTGAGGAATTGATCG
CCCGGCTGAAGCAGGGGATC

Product: H+transporting two-sector ATPase delta (OSCP) subunit

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MATTIDARALAAPLVEALLTTAAEQIRAAAPRIAGLSASEAAAVLPADLLPQVRNFLLTMAKEGLTGELNAVAAALPGYL
ETGSRAVDASVTSAIELSAEQKERITRELQQRYGDVHVTYHVDPTLIGGLIIRVGDQVLDNSLRARLSAIQRVLQAS

Sequences:

>Translated_157_residues
MATTIDARALAAPLVEALLTTAAEQIRAAAPRIAGLSASEAAAVLPADLLPQVRNFLLTMAKEGLTGELNAVAAALPGYL
ETGSRAVDASVTSAIELSAEQKERITRELQQRYGDVHVTYHVDPTLIGGLIIRVGDQVLDNSLRARLSAIQRVLQAS
>Mature_156_residues
ATTIDARALAAPLVEALLTTAAEQIRAAAPRIAGLSASEAAAVLPADLLPQVRNFLLTMAKEGLTGELNAVAAALPGYLE
TGSRAVDASVTSAIELSAEQKERITRELQQRYGDVHVTYHVDPTLIGGLIIRVGDQVLDNSLRARLSAIQRVLQAS

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_CHLAA (A9WGS7)

Other databases:

- EMBL:   CP000909
- RefSeq:   YP_001636632.1
- GeneID:   5827518
- GenomeReviews:   CP000909_GR
- KEGG:   cau:Caur_3044
- HOGENOM:   HBG666155
- OMA:   TRMAAIQ
- ProtClustDB:   CLSK972999
- HAMAP:   MF_01416
- InterPro:   IPR000711
- InterPro:   IPR020781
- PANTHER:   PTHR11910

Pfam domain/function: PF00213 OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 16537; Mature: 16406

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTIDARALAAPLVEALLTTAAEQIRAAAPRIAGLSASEAAAVLPADLLPQVRNFLLTM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHCCHHHHHHHHHHHHHH
AKEGLTGELNAVAAALPGYLETGSRAVDASVTSAIELSAEQKERITRELQQRYGDVHVTY
HHCCCCCHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
HVDPTLIGGLIIRVGDQVLDNSLRARLSAIQRVLQAS
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ATTIDARALAAPLVEALLTTAAEQIRAAAPRIAGLSASEAAAVLPADLLPQVRNFLLTM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHCCHHHHHHHHHHHHHH
AKEGLTGELNAVAAALPGYLETGSRAVDASVTSAIELSAEQKERITRELQQRYGDVHVTY
HHCCCCCHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
HVDPTLIGGLIIRVGDQVLDNSLRARLSAIQRVLQAS
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA