| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is ydiA [C]
Identifier: 222526443
GI number: 222526443
Start: 4005835
End: 4006674
Strand: Reverse
Name: ydiA [C]
Synonym: Chy400_3210
Alternate gene names: 222526443
Gene position: 4006674-4005835 (Counterclockwise)
Preceding gene: 222526446
Following gene: 222526441
Centisome position: 76.04
GC content: 57.38
Gene sequence:
>840_bases ATGAGTGACCAGCCAGTCTCGCAAACCGCACCTCCCCTCTACATTGTTTCCGGCGGTGCCGGCGCCGTCGGCGAGCAGGT CGCCCGACTAACCCTTTCGCAGTTTGAAGGGGCTGAAGTGCCCTTAATTATTATCCCTAATGTGCGCGACCTGAGTCAGA TTGCCGAGGTGGTTGAACGAGCAGCTCATCAGAACGGAACGATTCTGCATACGCTGATGGAACCCTCTCTCCGTCGTGAA CTGATGCGGCTGGCCCGTGAACGTGGTGTCGCCGAGATCGATCTGGTCGGTAGTGTATTGTCGCGCCTGGCCACCGTGTT GCGCAAAGAACCGCTCGGAAAACCCGGCCTGTACCAGCCCCGCCGCTCGGCCTACTTTGAACGACTCGATGCGATTGAAT ACACCGTTGCGCACGACGACGGTAACAAACCTCACGAGCTACATCAGGCTGATATTGTGCTGGTCGGTATCTCTCGTGTC GGCAAAACCCCGCTCAGTATGTATCTGGCCGTGTTGGGCTGGAAAGTTGCCAATGTCCCCCTGGTTCGCGAAGTACCACT TCCGGCTGAACTCTTCCAGGTCGATCCCCGACGGGTGATTGGCTTAATCGTGGAAGCCGAGCAGATCACGGCCCGCCGCC GCTGGCGCCAGCGCCGGATGGGGGTCAGTATTGGCGGCAATTATACCAGTCTCGATGCAGCTTACGACGAAGTGGAATGG GCCAGAAGAACGTTTCGGCAGCACGGCTGGACAACAATCAATGTCACCGACAAATCGATTGAGGAAAGTGCTGACGAGAT TATCACTCTGATCTCACGCCGCTTCAGCCAGCTTCCCTGA
Upstream 100 bases:
>100_bases TATGTCCGCTTTTAGTGGTATCATATCAGTATACGCATTATTTCGTCTACAGCAATTGTGCCGGATTTTCAGCGCTGTAC GCATTACAGGACGCTTGCAA
Downstream 100 bases:
>100_bases ACGCAGGTCAGGATTGGTGATGGGTGTTGCTTCTGCACCGACCACACCTATCAAGTGCGGTCGGTGCGCTCGTCGCTGTG CTACATCACGGCGATCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSDQPVSQTAPPLYIVSGGAGAVGEQVARLTLSQFEGAEVPLIIIPNVRDLSQIAEVVERAAHQNGTILHTLMEPSLRRE LMRLARERGVAEIDLVGSVLSRLATVLRKEPLGKPGLYQPRRSAYFERLDAIEYTVAHDDGNKPHELHQADIVLVGISRV GKTPLSMYLAVLGWKVANVPLVREVPLPAELFQVDPRRVIGLIVEAEQITARRRWRQRRMGVSIGGNYTSLDAAYDEVEW ARRTFRQHGWTTINVTDKSIEESADEIITLISRRFSQLP
Sequences:
>Translated_279_residues MSDQPVSQTAPPLYIVSGGAGAVGEQVARLTLSQFEGAEVPLIIIPNVRDLSQIAEVVERAAHQNGTILHTLMEPSLRRE LMRLARERGVAEIDLVGSVLSRLATVLRKEPLGKPGLYQPRRSAYFERLDAIEYTVAHDDGNKPHELHQADIVLVGISRV GKTPLSMYLAVLGWKVANVPLVREVPLPAELFQVDPRRVIGLIVEAEQITARRRWRQRRMGVSIGGNYTSLDAAYDEVEW ARRTFRQHGWTTINVTDKSIEESADEIITLISRRFSQLP >Mature_278_residues SDQPVSQTAPPLYIVSGGAGAVGEQVARLTLSQFEGAEVPLIIIPNVRDLSQIAEVVERAAHQNGTILHTLMEPSLRREL MRLARERGVAEIDLVGSVLSRLATVLRKEPLGKPGLYQPRRSAYFERLDAIEYTVAHDDGNKPHELHQADIVLVGISRVG KTPLSMYLAVLGWKVANVPLVREVPLPAELFQVDPRRVIGLIVEAEQITARRRWRQRRMGVSIGGNYTSLDAAYDEVEWA RRTFRQHGWTTINVTDKSIEESADEIITLISRRFSQLP
Specific function: Unknown
COG id: COG1806
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family
Homologues:
Organism=Escherichia coli, GI1787995, Length=280, Percent_Identity=28.2142857142857, Blast_Score=98, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2965_CHLAA (A9WG10)
Other databases:
- EMBL: CP000909 - RefSeq: YP_001636553.1 - GeneID: 5827438 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_2965 - HOGENOM: HBG304855 - OMA: AMEFAVM - ProtClustDB: PRK05339 - HAMAP: MF_01062 - InterPro: IPR005177
Pfam domain/function: PF03618 DUF299
EC number: NA
Molecular weight: Translated: 31182; Mature: 31051
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQPVSQTAPPLYIVSGGAGAVGEQVARLTLSQFEGAEVPLIIIPNVRDLSQIAEVVER CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHH AAHQNGTILHTLMEPSLRRELMRLARERGVAEIDLVGSVLSRLATVLRKEPLGKPGLYQP HHCCCCCEEHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC RRSAYFERLDAIEYTVAHDDGNKPHELHQADIVLVGISRVGKTPLSMYLAVLGWKVANVP HHHHHHHHHHHHHEEEEECCCCCCHHHHHCCEEEEEHHHHCCCHHHHHHHHHHHHHCCCC LVREVPLPAELFQVDPRRVIGLIVEAEQITARRRWRQRRMGVSIGGNYTSLDAAYDEVEW EEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHH ARRTFRQHGWTTINVTDKSIEESADEIITLISRRFSQLP HHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDQPVSQTAPPLYIVSGGAGAVGEQVARLTLSQFEGAEVPLIIIPNVRDLSQIAEVVER CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHH AAHQNGTILHTLMEPSLRRELMRLARERGVAEIDLVGSVLSRLATVLRKEPLGKPGLYQP HHCCCCCEEHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC RRSAYFERLDAIEYTVAHDDGNKPHELHQADIVLVGISRVGKTPLSMYLAVLGWKVANVP HHHHHHHHHHHHHEEEEECCCCCCHHHHHCCEEEEEHHHHCCCHHHHHHHHHHHHHCCCC LVREVPLPAELFQVDPRRVIGLIVEAEQITARRRWRQRRMGVSIGGNYTSLDAAYDEVEW EEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHH ARRTFRQHGWTTINVTDKSIEESADEIITLISRRFSQLP HHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA