| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526395
Identifier: 222526395
GI number: 222526395
Start: 3919663
End: 3920283
Strand: Reverse
Name: 222526395
Synonym: Chy400_3161
Alternate gene names: NA
Gene position: 3920283-3919663 (Counterclockwise)
Preceding gene: 222526396
Following gene: 222526394
Centisome position: 74.4
GC content: 62.8
Gene sequence:
>621_bases ATGATCAATGCCGCCGAATTAAGCGACATCCTGAGTGGTCGAGTCGGATCAATCACCATCACCCCCACTGGTGAGCGGCG GATCGACGATCCGCCGCCGGGGGCCATCCTACCCGGCAGCTTCAACCCATTGCACGCTGGTCATCTCGGCATGCAACGGG CCGTAGTCATCATGACCGGAAAACCAGTCCACTTCGAGCTAACAGTCCGAAACGCCGACAAAGGCGAACTCGCGCTTGAA GAGATTGAACGTCGGATCGCCCAATTCCAGCACCGCCACCACGTCATCCTCGCCGCCGCCCCCCTCTTCGTCCAGAAAGC CCGCCTCTACCCCGGTCGGGCATTCGTCCTCGGCTACGACACCGCCCTGCGCCTCGTAACCCCTCGCTACTACGGCGACG AAGCGGCAATGTTCGCCGCCTTCGCCGAACTGGCCGCAGCCGGATGCCGCTTCTTCGTCGCCGGGCGCCAGATCAACGGG CGCTTCTACACCCTCGCCGATCTGCAACTACCGGCAGGCTACGAACAGCTCTTCACCCCCATCCCCGAAGACCTCTTCCG CCGGGATATTTCTTCGACAGAGCTGCGGGCACAACGCGAGCGGGAGCGGGGAAGTAGCTGA
Upstream 100 bases:
>100_bases CGATAGAAGTAGCCGACACCCTGTACGGCGTAAGCATGGGTGACGACGGAGCATCACGGGTTGTCTCGCTGCGTGTCGCC GAATACGTGGGAACAGCGCC
Downstream 100 bases:
>100_bases AATGTGGCGAATAGCCCACTCTTCGTATACAATATGATCCTGCTGTTGCAGGATCAGAGAAATCAGGCATGAATACCATT CGAGCTATCGATCTATTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: CinA Domain Protein
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MINAAELSDILSGRVGSITITPTGERRIDDPPPGAILPGSFNPLHAGHLGMQRAVVIMTGKPVHFELTVRNADKGELALE EIERRIAQFQHRHHVILAAAPLFVQKARLYPGRAFVLGYDTALRLVTPRYYGDEAAMFAAFAELAAAGCRFFVAGRQING RFYTLADLQLPAGYEQLFTPIPEDLFRRDISSTELRAQRERERGSS
Sequences:
>Translated_206_residues MINAAELSDILSGRVGSITITPTGERRIDDPPPGAILPGSFNPLHAGHLGMQRAVVIMTGKPVHFELTVRNADKGELALE EIERRIAQFQHRHHVILAAAPLFVQKARLYPGRAFVLGYDTALRLVTPRYYGDEAAMFAAFAELAAAGCRFFVAGRQING RFYTLADLQLPAGYEQLFTPIPEDLFRRDISSTELRAQRERERGSS >Mature_206_residues MINAAELSDILSGRVGSITITPTGERRIDDPPPGAILPGSFNPLHAGHLGMQRAVVIMTGKPVHFELTVRNADKGELALE EIERRIAQFQHRHHVILAAAPLFVQKARLYPGRAFVLGYDTALRLVTPRYYGDEAAMFAAFAELAAAGCRFFVAGRQING RFYTLADLQLPAGYEQLFTPIPEDLFRRDISSTELRAQRERERGSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22830; Mature: 22830
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINAAELSDILSGRVGSITITPTGERRIDDPPPGAILPGSFNPLHAGHLGMQRAVVIMTG CCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC KPVHFELTVRNADKGELALEEIERRIAQFQHRHHVILAAAPLFVQKARLYPGRAFVLGYD CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHHCCCCEEEEEEEC TALRLVTPRYYGDEAAMFAAFAELAAAGCRFFVAGRQINGRFYTLADLQLPAGYEQLFTP CEEEEECCCEECCHHHHHHHHHHHHHHCCEEEEECEEECCEEEEEEEEECCCCHHHHHCC IPEDLFRRDISSTELRAQRERERGSS CCHHHHHCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MINAAELSDILSGRVGSITITPTGERRIDDPPPGAILPGSFNPLHAGHLGMQRAVVIMTG CCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC KPVHFELTVRNADKGELALEEIERRIAQFQHRHHVILAAAPLFVQKARLYPGRAFVLGYD CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHHCCCCEEEEEEEC TALRLVTPRYYGDEAAMFAAFAELAAAGCRFFVAGRQINGRFYTLADLQLPAGYEQLFTP CEEEEECCCEECCHHHHHHHHHHHHHHCCEEEEECEEECCEEEEEEEEECCCCHHHHHCC IPEDLFRRDISSTELRAQRERERGSS CCHHHHHCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA