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The map label for this gene is yafM [C]

Identifier: 222526363

GI number: 222526363

Start: 3872654

End: 3873208

Strand: Reverse

Name: yafM [C]

Synonym: Chy400_3129

Alternate gene names: 222526363

Gene position: 3873208-3872654 (Counterclockwise)

Preceding gene: 222526367

Following gene: 222526359

Centisome position: 73.51

GC content: 45.77

Gene sequence:

>555_bases
ATGGAACAAGATACCAGCATGATCACGTGGCATCACAGTCCAGCACACCTCTTTGTGCCAAATGCGTTTTACATCGTCAC
GGCTTCTACGCTATGCCATCAGCCCTTGTTCAACTCACCACAGAAATTGCATATCCTGCAAAGTACTCTCTTCGAGATTA
TGCAAGCATACAATTGGCGATTACAAGCATGGGCTGTATTCTCCAATCACTACCACTTTATTGCTCAGTCGCCTGAAGAT
AGCAGCTCGTTAAAGCCCCTTATCCAACGGTTTCATTCTCAAACTGCACGAGCGATTAATGTTTTGGATGGGAGTAAAGG
TCGCAAGGTCTGGTTTCAATACTGGGATACTTGTCTAACCTATGAACAAAGTTACCTGGCACGCCTGAATTATGTTCACA
ACAACCCTGTCAAACACGGGCTAGTCGCGAGTGCCGAGCAGTATCCCTTCTGTTCAGCTACATGGTTTAACGAACGTGCT
CCAGATGCATTGCGAAGGAAACTAGCAACGATACCGTATGACAACATCGATGTACCAGAGGTACATTGTTGTTGA

Upstream 100 bases:

>100_bases
GGGTGGTAAGATAGTGTTCGTGCATCAGGAGTCAGGTGATATACTCTGATTGTCGAACAAGTATGCACCCCTGAACTGTG
CAGGTTGACAAGCCGATGTT

Downstream 100 bases:

>100_bases
TGTGATCCAGGAGAAATAGTCTCAGCCAAAGCCTGATATGGACGTTGGTCCTTGAACGGTATCGTTGCCTATCTCAGCAT
CGCTGCTGCATCCACCGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MEQDTSMITWHHSPAHLFVPNAFYIVTASTLCHQPLFNSPQKLHILQSTLFEIMQAYNWRLQAWAVFSNHYHFIAQSPED
SSSLKPLIQRFHSQTARAINVLDGSKGRKVWFQYWDTCLTYEQSYLARLNYVHNNPVKHGLVASAEQYPFCSATWFNERA
PDALRRKLATIPYDNIDVPEVHCC

Sequences:

>Translated_184_residues
MEQDTSMITWHHSPAHLFVPNAFYIVTASTLCHQPLFNSPQKLHILQSTLFEIMQAYNWRLQAWAVFSNHYHFIAQSPED
SSSLKPLIQRFHSQTARAINVLDGSKGRKVWFQYWDTCLTYEQSYLARLNYVHNNPVKHGLVASAEQYPFCSATWFNERA
PDALRRKLATIPYDNIDVPEVHCC
>Mature_184_residues
MEQDTSMITWHHSPAHLFVPNAFYIVTASTLCHQPLFNSPQKLHILQSTLFEIMQAYNWRLQAWAVFSNHYHFIAQSPED
SSSLKPLIQRFHSQTARAINVLDGSKGRKVWFQYWDTCLTYEQSYLARLNYVHNNPVKHGLVASAEQYPFCSATWFNERA
PDALRRKLATIPYDNIDVPEVHCC

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21414; Mature: 21414

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQDTSMITWHHSPAHLFVPNAFYIVTASTLCHQPLFNSPQKLHILQSTLFEIMQAYNWR
CCCCCCEEEEECCCCEEECCCEEEEEEEHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCE
LQAWAVFSNHYHFIAQSPEDSSSLKPLIQRFHSQTARAINVLDGSKGRKVWFQYWDTCLT
EEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHEEHCCCCCCCCCHHHHHHHHHHH
YEQSYLARLNYVHNNPVKHGLVASAEQYPFCSATWFNERAPDALRRKLATIPYDNIDVPE
HHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
VHCC
CCCC
>Mature Secondary Structure
MEQDTSMITWHHSPAHLFVPNAFYIVTASTLCHQPLFNSPQKLHILQSTLFEIMQAYNWR
CCCCCCEEEEECCCCEEECCCEEEEEEEHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCE
LQAWAVFSNHYHFIAQSPEDSSSLKPLIQRFHSQTARAINVLDGSKGRKVWFQYWDTCLT
EEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHEEHCCCCCCCCCHHHHHHHHHHH
YEQSYLARLNYVHNNPVKHGLVASAEQYPFCSATWFNERAPDALRRKLATIPYDNIDVPE
HHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
VHCC
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA