| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526344
Identifier: 222526344
GI number: 222526344
Start: 3839182
End: 3840195
Strand: Direct
Name: 222526344
Synonym: Chy400_3110
Alternate gene names: NA
Gene position: 3839182-3840195 (Clockwise)
Preceding gene: 222526343
Following gene: 222526345
Centisome position: 72.86
GC content: 53.45
Gene sequence:
>1014_bases ATGGCTGGCGCATTTCCCCTCAGTGATGATACCGTCAAAGCACTTGCGCCGTGCAATTTGCCTTTTCTCCGTCGTGATCC ATTTGTCCGCAGTAGTAGTAGCCTGAGTATTTCTGAACTACCGCCGTCGCTGCAAGACCTGGTACGACGTTTATACGACA CCTTGCTGAGGATTTACAGCAGTTTTGTTCAGAAGCGCCACGTTGATCACAGTCATTTGCTTCATTTGCTTGGCGAAACC GGCTGGCACGATTTGCTCAACGAATTGCGCAATATTTCGCTTGAACAACGCGACTCAACATTGAGCCAGGTTATCCACGA TGTGCGTGGTGGATCGTTGCAGGCACTTGTATTGCAGTTGCAATTGCTCGAACTGGCGCAACACCAGCCAGTTGATACCG AGCGTATCTACCTCTTAACACGTGATCACCTCAAGATTATGCGCAATTGCCTTCCCGACCTCGACCCGGTACGCACTGCT CGTGACATCGAATTACGTGAGCACGGGGTTGATCTGTTGCTTGAGAAGTGGCAACAGGCAGACTATCGCCTGCCTGATGG GACGGCGAGTGTGATCGTTGATGCCCGCTACAATGGGGTGGTAGCCGACCGCTGTGTTGAGTTCTCTGCACTTGATCGGG TGCTGTACAATCTTGTGAACAATGCGACACGCCATAGTGCCGATCAGCGGGTGATGATTGGCATCTTTCCCATTTTAGAG TGCGAGTCGCCATCGTTGCGGCTAGTGGTTGCCAATCGCATTGATCCTGTGCAGCATTCAGCCCTCGTGCAGCGCTTCGG GCAGCAATGGAGTGATCTCTTCCGCGGCGGTTTCACATTTAGCAGCGGTGGTCAGGAAGGTCATGGCTTCGGTCTGGCCA TTTGCGCCGAGCTGGTTGCCAATGCCTATGGCCTTAGTAACGGAGCTGCTGCGATCAATGGTGGTTACGTCGGCGCTCGT CCACACGGTGATCTTTTCGTTGCCTGGGCACACTGGCCAATTGCAGCGCCCTAA
Upstream 100 bases:
>100_bases TGTGCCTGATAAATCTTCGTCAACATCGTTAGTAAAATCGAGTACAATGACGTTTAACTATATGGAATATTGATTGATCT GATTTGGAAGGGTTTCAATC
Downstream 100 bases:
>100_bases ATCCTTGCAGGAGGGGAAACTACCTGCTATACTGATAGCCAGGTAGTTTCCCTTTCCTGGACAGAAATCTATTCCTCATG GACGAGATCATTGACCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MAGAFPLSDDTVKALAPCNLPFLRRDPFVRSSSSLSISELPPSLQDLVRRLYDTLLRIYSSFVQKRHVDHSHLLHLLGET GWHDLLNELRNISLEQRDSTLSQVIHDVRGGSLQALVLQLQLLELAQHQPVDTERIYLLTRDHLKIMRNCLPDLDPVRTA RDIELREHGVDLLLEKWQQADYRLPDGTASVIVDARYNGVVADRCVEFSALDRVLYNLVNNATRHSADQRVMIGIFPILE CESPSLRLVVANRIDPVQHSALVQRFGQQWSDLFRGGFTFSSGGQEGHGFGLAICAELVANAYGLSNGAAAINGGYVGAR PHGDLFVAWAHWPIAAP
Sequences:
>Translated_337_residues MAGAFPLSDDTVKALAPCNLPFLRRDPFVRSSSSLSISELPPSLQDLVRRLYDTLLRIYSSFVQKRHVDHSHLLHLLGET GWHDLLNELRNISLEQRDSTLSQVIHDVRGGSLQALVLQLQLLELAQHQPVDTERIYLLTRDHLKIMRNCLPDLDPVRTA RDIELREHGVDLLLEKWQQADYRLPDGTASVIVDARYNGVVADRCVEFSALDRVLYNLVNNATRHSADQRVMIGIFPILE CESPSLRLVVANRIDPVQHSALVQRFGQQWSDLFRGGFTFSSGGQEGHGFGLAICAELVANAYGLSNGAAAINGGYVGAR PHGDLFVAWAHWPIAAP >Mature_336_residues AGAFPLSDDTVKALAPCNLPFLRRDPFVRSSSSLSISELPPSLQDLVRRLYDTLLRIYSSFVQKRHVDHSHLLHLLGETG WHDLLNELRNISLEQRDSTLSQVIHDVRGGSLQALVLQLQLLELAQHQPVDTERIYLLTRDHLKIMRNCLPDLDPVRTAR DIELREHGVDLLLEKWQQADYRLPDGTASVIVDARYNGVVADRCVEFSALDRVLYNLVNNATRHSADQRVMIGIFPILEC ESPSLRLVVANRIDPVQHSALVQRFGQQWSDLFRGGFTFSSGGQEGHGFGLAICAELVANAYGLSNGAAAINGGYVGARP HGDLFVAWAHWPIAAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37561; Mature: 37430
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGAFPLSDDTVKALAPCNLPFLRRDPFVRSSSSLSISELPPSLQDLVRRLYDTLLRIYS CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH SFVQKRHVDHSHLLHLLGETGWHDLLNELRNISLEQRDSTLSQVIHDVRGGSLQALVLQL HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH QLLELAQHQPVDTERIYLLTRDHLKIMRNCLPDLDPVRTARDIELREHGVDLLLEKWQQA HHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC DYRLPDGTASVIVDARYNGVVADRCVEFSALDRVLYNLVNNATRHSADQRVMIGIFPILE CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEE CESPSLRLVVANRIDPVQHSALVQRFGQQWSDLFRGGFTFSSGGQEGHGFGLAICAELVA CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH NAYGLSNGAAAINGGYVGARPHGDLFVAWAHWPIAAP HHHCCCCCCEEECCCEECCCCCCCEEEEEECCCCCCC >Mature Secondary Structure AGAFPLSDDTVKALAPCNLPFLRRDPFVRSSSSLSISELPPSLQDLVRRLYDTLLRIYS CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH SFVQKRHVDHSHLLHLLGETGWHDLLNELRNISLEQRDSTLSQVIHDVRGGSLQALVLQL HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH QLLELAQHQPVDTERIYLLTRDHLKIMRNCLPDLDPVRTARDIELREHGVDLLLEKWQQA HHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC DYRLPDGTASVIVDARYNGVVADRCVEFSALDRVLYNLVNNATRHSADQRVMIGIFPILE CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEE CESPSLRLVVANRIDPVQHSALVQRFGQQWSDLFRGGFTFSSGGQEGHGFGLAICAELVA CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH NAYGLSNGAAAINGGYVGARPHGDLFVAWAHWPIAAP HHHCCCCCCEEECCCEECCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA