| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is galT [H]
Identifier: 222526343
GI number: 222526343
Start: 3838091
End: 3839080
Strand: Direct
Name: galT [H]
Synonym: Chy400_3109
Alternate gene names: 222526343
Gene position: 3838091-3839080 (Clockwise)
Preceding gene: 222526335
Following gene: 222526344
Centisome position: 72.84
GC content: 54.44
Gene sequence:
>990_bases ATGTCCGAATTACGGCAAAATATCGCTACTCGTGAATGGGTTATCATTGCCAGCGAACGTGCCCGTCGTCCAAATTCGTT TACCGAACATCGTCAGCAACTGTTGACCGCCGAGCGACCTCAGCACGATCCTCAATGCCCCTTCTGTGTAGGCAATGAAG AACTCGACCTCGAAGTTGATCGCTATCCGATCACCGGGCCTTGGCAGGTGCGGATTGTTCGCAACAAGTATCCGGCGCTG CACGGTGATAGGCCGCTTGTACGTCACTTCGAGGGTGTACGGCGTAACATAAGTGGTTATGGTTACCACGAGGTATTGGT CGAGCATCCACACCACAATACCACGCTTGGTCTGATGACCCATGCTGAGGTGCGGCTGGTGCTGGCAACCTATCTTAGCC GGGGACTGGCGATGAGCAGTGATCCCCGGATTGAGCAGGTGGTGATCTTCAAAAACCACGGTGAACGGGCTGGGGCCTCG TTGCCACATCCGCACAGCCAGCTCATGGCCGTTCCGGTTGTGCCTGCTGATGTGCGCCACCGGATCGAAGAGGCACGTCG TTTCTTCGACGATACCGGACAGTGTGTCTTCTGTACAATGCTGGCCGACGAACTGGCGCAGCGGGAACGGATCGTCTACG CCAATGATGATTTTGTGGCTTTTGTTCTCTACGCTGCTTCGTCACCATTTCATATCTGGGTCTTGCCGCGAAAACATCGT GCCAGCTTTTTTCACATTGCCGAGGCGGAGCTTGATGGTCTGGCTGATGTTGTCCGTGAGGTGTTTCATCGCCTCTACTA TCGGCTCAACGATCCCGATTTTAATCTGGTATTGCGCTCAACTCCGGCCAAAGAAGCAGAGAACGGCTACTTTCACTGGT ACCTGGCAATTGTTCCCCGCCTTTCGTATATGGCCGGCTTTGAGCTGGGCAGCGGCATCTTTATCAACCCCAGCATTCCC GAAGCCTGTGCTGCATTTCTGCGTGAGTAG
Upstream 100 bases:
>100_bases ACATCCATCGACAGATATCCACTTGCCGAACCTGCCCATCACGGCTACAATACAGAGCATAACGCGGCGCTGCGGTCTTT GTCCGCTGTGGAGCAGGTTC
Downstream 100 bases:
>100_bases CTGTGCCTGATAAATCTTCGTCAACATCGTTAGTAAAATCGAGTACAATGACGTTTAACTATATGGAATATTGATTGATC TGATTTGGAAGGGTTTCAAT
Product: galactose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Gal-1-P uridylyltransferase; UDP-glucose--hexose-1-phosphate uridylyltransferase [H]
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSELRQNIATREWVIIASERARRPNSFTEHRQQLLTAERPQHDPQCPFCVGNEELDLEVDRYPITGPWQVRIVRNKYPAL HGDRPLVRHFEGVRRNISGYGYHEVLVEHPHHNTTLGLMTHAEVRLVLATYLSRGLAMSSDPRIEQVVIFKNHGERAGAS LPHPHSQLMAVPVVPADVRHRIEEARRFFDDTGQCVFCTMLADELAQRERIVYANDDFVAFVLYAASSPFHIWVLPRKHR ASFFHIAEAELDGLADVVREVFHRLYYRLNDPDFNLVLRSTPAKEAENGYFHWYLAIVPRLSYMAGFELGSGIFINPSIP EACAAFLRE
Sequences:
>Translated_329_residues MSELRQNIATREWVIIASERARRPNSFTEHRQQLLTAERPQHDPQCPFCVGNEELDLEVDRYPITGPWQVRIVRNKYPAL HGDRPLVRHFEGVRRNISGYGYHEVLVEHPHHNTTLGLMTHAEVRLVLATYLSRGLAMSSDPRIEQVVIFKNHGERAGAS LPHPHSQLMAVPVVPADVRHRIEEARRFFDDTGQCVFCTMLADELAQRERIVYANDDFVAFVLYAASSPFHIWVLPRKHR ASFFHIAEAELDGLADVVREVFHRLYYRLNDPDFNLVLRSTPAKEAENGYFHWYLAIVPRLSYMAGFELGSGIFINPSIP EACAAFLRE >Mature_328_residues SELRQNIATREWVIIASERARRPNSFTEHRQQLLTAERPQHDPQCPFCVGNEELDLEVDRYPITGPWQVRIVRNKYPALH GDRPLVRHFEGVRRNISGYGYHEVLVEHPHHNTTLGLMTHAEVRLVLATYLSRGLAMSSDPRIEQVVIFKNHGERAGASL PHPHSQLMAVPVVPADVRHRIEEARRFFDDTGQCVFCTMLADELAQRERIVYANDDFVAFVLYAASSPFHIWVLPRKHRA SFFHIAEAELDGLADVVREVFHRLYYRLNDPDFNLVLRSTPAKEAENGYFHWYLAIVPRLSYMAGFELGSGIFINPSIPE ACAAFLRE
Specific function: Galactose metabolism; second step. [C]
COG id: COG1085
COG function: function code C; Galactose-1-phosphate uridylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the galactose-1-phosphate uridylyltransferase type 1 family [H]
Homologues:
Organism=Homo sapiens, GI22165416, Length=298, Percent_Identity=28.5234899328859, Blast_Score=105, Evalue=6e-23, Organism=Escherichia coli, GI1786973, Length=318, Percent_Identity=24.5283018867925, Blast_Score=96, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17557105, Length=272, Percent_Identity=27.2058823529412, Blast_Score=90, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6319492, Length=333, Percent_Identity=23.7237237237237, Blast_Score=93, Evalue=4e-20, Organism=Drosophila melanogaster, GI24582285, Length=340, Percent_Identity=26.1764705882353, Blast_Score=96, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001937 - InterPro: IPR019779 - InterPro: IPR005850 - InterPro: IPR005849 - InterPro: IPR011146 - InterPro: IPR011151 [H]
Pfam domain/function: PF02744 GalP_UDP_tr_C; PF01087 GalP_UDP_transf [H]
EC number: =2.7.7.12 [H]
Molecular weight: Translated: 37859; Mature: 37727
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELRQNIATREWVIIASERARRPNSFTEHRQQLLTAERPQHDPQCPFCVGNEELDLEVD CCHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEC RYPITGPWQVRIVRNKYPALHGDRPLVRHFEGVRRNISGYGYHEVLVEHPHHNTTLGLMT CCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHEEECCCCCCEEEEEE HAEVRLVLATYLSRGLAMSSDPRIEQVVIFKNHGERAGASLPHPHSQLMAVPVVPADVRH HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHEEEEECCCHHHHH RIEEARRFFDDTGQCVFCTMLADELAQRERIVYANDDFVAFVLYAASSPFHIWVLPRKHR HHHHHHHHHCCCCCEEEHHHHHHHHHHCCEEEEECCCEEEEEEEECCCCEEEEEEECCCC ASFFHIAEAELDGLADVVREVFHRLYYRLNDPDFNLVLRSTPAKEAENGYFHWYLAIVPR CCEEEEEHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCEEEEHHHHHHH LSYMAGFELGSGIFINPSIPEACAAFLRE HHHHHCCCCCCCEEECCCCHHHHHHHHCC >Mature Secondary Structure SELRQNIATREWVIIASERARRPNSFTEHRQQLLTAERPQHDPQCPFCVGNEELDLEVD CHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEC RYPITGPWQVRIVRNKYPALHGDRPLVRHFEGVRRNISGYGYHEVLVEHPHHNTTLGLMT CCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHEEECCCCCCEEEEEE HAEVRLVLATYLSRGLAMSSDPRIEQVVIFKNHGERAGASLPHPHSQLMAVPVVPADVRH HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHEEEEECCCHHHHH RIEEARRFFDDTGQCVFCTMLADELAQRERIVYANDDFVAFVLYAASSPFHIWVLPRKHR HHHHHHHHHCCCCCEEEHHHHHHHHHHCCEEEEECCCEEEEEEEECCCCEEEEEEECCCC ASFFHIAEAELDGLADVVREVFHRLYYRLNDPDFNLVLRSTPAKEAENGYFHWYLAIVPR CCEEEEEHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCEEEEHHHHHHH LSYMAGFELGSGIFINPSIPEACAAFLRE HHHHHCCCCCCCEEECCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9741105; 10360571 [H]