Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222526267

Identifier: 222526267

GI number: 222526267

Start: 3741269

End: 3743266

Strand: Direct

Name: 222526267

Synonym: Chy400_3033

Alternate gene names: NA

Gene position: 3741269-3743266 (Clockwise)

Preceding gene: 222526265

Following gene: 222526268

Centisome position: 71.01

GC content: 59.26

Gene sequence:

>1998_bases
ATGAGCGATGCCGATGGAGAGATTGTCTCGGTTGGAAGACCGGATCGCGCCGGAAAGAGTCGATTGGGTAGTGCTGTCTC
ACAGGTGGTTGTCGTTGCCGATGAGCGACCGTTTGCCGTCGCGTTGGCTGCTTACCAGCGGGCAGATACGACGTTGTTGC
CCCATTTTTACCTGGCTCGCGATGGCACGCGCTATCAATTGTTGACAGCCGGACGTGCCGGTTGGGGGGCCGGGCGGGCG
ATCTGGCGTCAGCGCTGGCGTAATCTTGATCGTAGTGCGTTGATTCTCTGCCTCGAAGCGCCTTCGGTCACCGATCTCAG
TGAGGCGCAGGCGACAGTTCTGGCAGGCTGGCTCCCGGCGCTGGTTGCCCAACATCATCTGTCACTGGCCGATGTCGGGA
TGCTGGTGTCAGCGGCCAATGGTCAGGTGCGGTTGCAGCCGTATATTCCGCCTGCCCCGCCGGTAGAGCCTGCCCTCGAT
ACGGCGTTCGTGCTGGGGAGTGGCGTGCGGTCGCCAGAGCAGGAGCTTTGGCTGGGTCTGGCTACGATTACCTGGCGGCA
ACGGGGAGCGCAGTTGCGCCTTAATCAAGCCTTTTCGCTGTATTGGGGGAAGGTTGATCTGGGTGCACCGCTGGCACCTA
ACGAGCCGCCACCGGTGGCTGTCGATGGCAAGACGTACAATTTTCAGGTCTTTGCCCGCGATACGATCTTTAATGAAGGC
ACGCAGTACGCCGCTGTTCAGCGTTTGTCCGATCTGCTCGGCCCCGACATTGGGGCGATTCCGACTGCCGGTGTGAGCCG
AGCGTTGATTGAGGCAAGTTATCGTAGTGCGCTCAAAGCCAGTGCCGCTCGCGCACCACTCGAAGGGAAGACGGAGTTTC
GGGCCGATTGGAAATTTCATTTTGTCGCTCTGCAGGCCCGCCTTGGCCCGGCACTCAGTGGCAATTATGTGACTGCCGAC
CGCGCCTTTGCAGTGCAGGTCTTTGCCGGTGATACGCTCTATACCCCGATGAGTCAGCAGTCCGGTTGTTTCTTTCTCAG
CCTGACCGATCCGGCCAGTCCGCAGTACGCTCTCATCTGGGCCGAGACCTGTAAGGTGGCCGGGATTCCGTATCTGCCTA
CCGATCCGTTTCATCAGCGGGCTATCGAATTGAAGTTGGGCACGCCGTTGAGCGGGGTCATGCGTGAGACGATTAACGGG
CAGGTCTATGATGTGCAGGTCTTTGCGTATGATACGTTGTACCGGGGCAGTGATGGGGTCATTCGCCGTATGAGCGAACT
GCCGCGTCCGGCTGAGGTGCAGAACTGGCAGCCCAAACCGGTTGCGCAACCGGTACAACCGACGCCGGCACCGCAACCTG
CACCGGCACCGGCGCCATCGCCATCACCGTCACCATCACCTGCCGTTGATGTGCGCAATGCCCCGGAGGTGGTACGGGCG
GGTGAGCCGCGTCGCGATCCCAACTGGCCACCCAAACCTGATTTCAACATCCTGACCGACCGGAACAATCAGCGTGAGCA
GGTGCTGGGGAAGATTGAGTGGGTACGGCGGAGTGGTGATGATATTACGATCACAAATGATTGGGTTGCCCGTCACATTA
TCGAGGTGCATATTCCGCAATTGGAGCGTTTTCGGAATACCAACGGTGGGCGGATTAAGTTTCATCGGGTCGCTGCCGAC
CAGTTACGGCGGTTGTGGCAGGCATGGGAAGATGCCGGTCTGCTCCATTTGGTGCTAACATTTGACGGGGCCTGGTGGCC
ACGGACGATCCGCAGCAATCCGACGACGTTGAGTAATCACGCTTACGGGACGGCGTTTGATATTAATGCGCAGTGGAACG
GCTTTTACAAGCCGGCGGCGCTGGTTGGTGATCGCGGTTCGGTGCGTGAACTGGTACCCATTGCCAATGCCCTCGGTTTC
TTCTGGGGTGGTCACTGGAACTACGATGGCAGGGGAGCCAGTGATGGTATGCATTTTGAGTGGGCAGTTGCCCGTTGA

Upstream 100 bases:

>100_bases
TGATCAGTCTTGCTGATAAAACTTGAAATCTGAATTGCCTTCTCTGCCGCCCTGTGCTACGATGAGCCTTGAGCGTTCGC
CACTTGTGACGGAGTAAGCT

Downstream 100 bases:

>100_bases
GCAAAGGAGCGCATCATGCAACTGCAAGGGTTGAGTGTCCTCGTTACCGGTGGTGCATCCGGTCTGGGCGCAGCGACGGC
TGAGCGATTGGCCGGGGCCG

Product: N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD

Products: NA

Alternate protein names: Lytic Transglycosylase Catalytic

Number of amino acids: Translated: 665; Mature: 664

Protein sequence:

>665_residues
MSDADGEIVSVGRPDRAGKSRLGSAVSQVVVVADERPFAVALAAYQRADTTLLPHFYLARDGTRYQLLTAGRAGWGAGRA
IWRQRWRNLDRSALILCLEAPSVTDLSEAQATVLAGWLPALVAQHHLSLADVGMLVSAANGQVRLQPYIPPAPPVEPALD
TAFVLGSGVRSPEQELWLGLATITWRQRGAQLRLNQAFSLYWGKVDLGAPLAPNEPPPVAVDGKTYNFQVFARDTIFNEG
TQYAAVQRLSDLLGPDIGAIPTAGVSRALIEASYRSALKASAARAPLEGKTEFRADWKFHFVALQARLGPALSGNYVTAD
RAFAVQVFAGDTLYTPMSQQSGCFFLSLTDPASPQYALIWAETCKVAGIPYLPTDPFHQRAIELKLGTPLSGVMRETING
QVYDVQVFAYDTLYRGSDGVIRRMSELPRPAEVQNWQPKPVAQPVQPTPAPQPAPAPAPSPSPSPSPAVDVRNAPEVVRA
GEPRRDPNWPPKPDFNILTDRNNQREQVLGKIEWVRRSGDDITITNDWVARHIIEVHIPQLERFRNTNGGRIKFHRVAAD
QLRRLWQAWEDAGLLHLVLTFDGAWWPRTIRSNPTTLSNHAYGTAFDINAQWNGFYKPAALVGDRGSVRELVPIANALGF
FWGGHWNYDGRGASDGMHFEWAVAR

Sequences:

>Translated_665_residues
MSDADGEIVSVGRPDRAGKSRLGSAVSQVVVVADERPFAVALAAYQRADTTLLPHFYLARDGTRYQLLTAGRAGWGAGRA
IWRQRWRNLDRSALILCLEAPSVTDLSEAQATVLAGWLPALVAQHHLSLADVGMLVSAANGQVRLQPYIPPAPPVEPALD
TAFVLGSGVRSPEQELWLGLATITWRQRGAQLRLNQAFSLYWGKVDLGAPLAPNEPPPVAVDGKTYNFQVFARDTIFNEG
TQYAAVQRLSDLLGPDIGAIPTAGVSRALIEASYRSALKASAARAPLEGKTEFRADWKFHFVALQARLGPALSGNYVTAD
RAFAVQVFAGDTLYTPMSQQSGCFFLSLTDPASPQYALIWAETCKVAGIPYLPTDPFHQRAIELKLGTPLSGVMRETING
QVYDVQVFAYDTLYRGSDGVIRRMSELPRPAEVQNWQPKPVAQPVQPTPAPQPAPAPAPSPSPSPSPAVDVRNAPEVVRA
GEPRRDPNWPPKPDFNILTDRNNQREQVLGKIEWVRRSGDDITITNDWVARHIIEVHIPQLERFRNTNGGRIKFHRVAAD
QLRRLWQAWEDAGLLHLVLTFDGAWWPRTIRSNPTTLSNHAYGTAFDINAQWNGFYKPAALVGDRGSVRELVPIANALGF
FWGGHWNYDGRGASDGMHFEWAVAR
>Mature_664_residues
SDADGEIVSVGRPDRAGKSRLGSAVSQVVVVADERPFAVALAAYQRADTTLLPHFYLARDGTRYQLLTAGRAGWGAGRAI
WRQRWRNLDRSALILCLEAPSVTDLSEAQATVLAGWLPALVAQHHLSLADVGMLVSAANGQVRLQPYIPPAPPVEPALDT
AFVLGSGVRSPEQELWLGLATITWRQRGAQLRLNQAFSLYWGKVDLGAPLAPNEPPPVAVDGKTYNFQVFARDTIFNEGT
QYAAVQRLSDLLGPDIGAIPTAGVSRALIEASYRSALKASAARAPLEGKTEFRADWKFHFVALQARLGPALSGNYVTADR
AFAVQVFAGDTLYTPMSQQSGCFFLSLTDPASPQYALIWAETCKVAGIPYLPTDPFHQRAIELKLGTPLSGVMRETINGQ
VYDVQVFAYDTLYRGSDGVIRRMSELPRPAEVQNWQPKPVAQPVQPTPAPQPAPAPAPSPSPSPSPAVDVRNAPEVVRAG
EPRRDPNWPPKPDFNILTDRNNQREQVLGKIEWVRRSGDDITITNDWVARHIIEVHIPQLERFRNTNGGRIKFHRVAADQ
LRRLWQAWEDAGLLHLVLTFDGAWWPRTIRSNPTTLSNHAYGTAFDINAQWNGFYKPAALVGDRGSVRELVPIANALGFF
WGGHWNYDGRGASDGMHFEWAVAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73122; Mature: 72991

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDADGEIVSVGRPDRAGKSRLGSAVSQVVVVADERPFAVALAAYQRADTTLLPHFYLAR
CCCCCCCEEECCCCCCCHHHHHHHHHEEEEEEECCCCEEEEEEHHHHCCCEECCCEEEEC
DGTRYQLLTAGRAGWGAGRAIWRQRWRNLDRSALILCLEAPSVTDLSEAQATVLAGWLPA
CCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
LVAQHHLSLADVGMLVSAANGQVRLQPYIPPAPPVEPALDTAFVLGSGVRSPEQELWLGL
HHHHHCCCHHHHHHEEEECCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCHHHHHEEH
ATITWRQRGAQLRLNQAFSLYWGKVDLGAPLAPNEPPPVAVDGKTYNFQVFARDTIFNEG
HEEEEHHCCCEEEEECEEEEEEEEEECCCCCCCCCCCCEEECCCEEEEEEEEECEECCCC
TQYAAVQRLSDLLGPDIGAIPTAGVSRALIEASYRSALKASAARAPLEGKTEFRADWKFH
CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEEE
FVALQARLGPALSGNYVTADRAFAVQVFAGDTLYTPMSQQSGCFFLSLTDPASPQYALIW
EEEEEECCCCCCCCCEEEECCEEEEEEEECCEEECCCCCCCCEEEEEECCCCCCCEEEEE
AETCKVAGIPYLPTDPFHQRAIELKLGTPLSGVMRETINGQVYDVQVFAYDTLYRGSDGV
ECCHHHCCCCCCCCCHHHHEEEEEEECCCHHHHHHHHCCCEEEEEEEEEEEEEEECCCHH
IRRMSELPRPAEVQNWQPKPVAQPVQPTPAPQPAPAPAPSPSPSPSPAVDVRNAPEVVRA
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC
GEPRRDPNWPPKPDFNILTDRNNQREQVLGKIEWVRRSGDDITITNDWVARHIIEVHIPQ
CCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHEECHH
LERFRNTNGGRIKFHRVAADQLRRLWQAWEDAGLLHLVLTFDGAWWPRTIRSNPTTLSNH
HHHHCCCCCCEEEEEEHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEECCC
AYGTAFDINAQWNGFYKPAALVGDRGSVRELVPIANALGFFWGGHWNYDGRGASDGMHFE
CCCEEEEECCCCCCEECCCEEECCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEE
WAVAR
EEECC
>Mature Secondary Structure 
SDADGEIVSVGRPDRAGKSRLGSAVSQVVVVADERPFAVALAAYQRADTTLLPHFYLAR
CCCCCCEEECCCCCCCHHHHHHHHHEEEEEEECCCCEEEEEEHHHHCCCEECCCEEEEC
DGTRYQLLTAGRAGWGAGRAIWRQRWRNLDRSALILCLEAPSVTDLSEAQATVLAGWLPA
CCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
LVAQHHLSLADVGMLVSAANGQVRLQPYIPPAPPVEPALDTAFVLGSGVRSPEQELWLGL
HHHHHCCCHHHHHHEEEECCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCHHHHHEEH
ATITWRQRGAQLRLNQAFSLYWGKVDLGAPLAPNEPPPVAVDGKTYNFQVFARDTIFNEG
HEEEEHHCCCEEEEECEEEEEEEEEECCCCCCCCCCCCEEECCCEEEEEEEEECEECCCC
TQYAAVQRLSDLLGPDIGAIPTAGVSRALIEASYRSALKASAARAPLEGKTEFRADWKFH
CHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEEE
FVALQARLGPALSGNYVTADRAFAVQVFAGDTLYTPMSQQSGCFFLSLTDPASPQYALIW
EEEEEECCCCCCCCCEEEECCEEEEEEEECCEEECCCCCCCCEEEEEECCCCCCCEEEEE
AETCKVAGIPYLPTDPFHQRAIELKLGTPLSGVMRETINGQVYDVQVFAYDTLYRGSDGV
ECCHHHCCCCCCCCCHHHHEEEEEEECCCHHHHHHHHCCCEEEEEEEEEEEEEEECCCHH
IRRMSELPRPAEVQNWQPKPVAQPVQPTPAPQPAPAPAPSPSPSPSPAVDVRNAPEVVRA
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC
GEPRRDPNWPPKPDFNILTDRNNQREQVLGKIEWVRRSGDDITITNDWVARHIIEVHIPQ
CCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHEECHH
LERFRNTNGGRIKFHRVAADQLRRLWQAWEDAGLLHLVLTFDGAWWPRTIRSNPTTLSNH
HHHHCCCCCCEEEEEEHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEECCC
AYGTAFDINAQWNGFYKPAALVGDRGSVRELVPIANALGFFWGGHWNYDGRGASDGMHFE
CCCEEEEECCCCCCEECCCEEECCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEE
WAVAR
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA