| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526254
Identifier: 222526254
GI number: 222526254
Start: 3725531
End: 3727069
Strand: Reverse
Name: 222526254
Synonym: Chy400_3018
Alternate gene names: NA
Gene position: 3727069-3725531 (Counterclockwise)
Preceding gene: 222526255
Following gene: 222526253
Centisome position: 70.74
GC content: 57.31
Gene sequence:
>1539_bases GTGGACGTTATCGGTTATCTATTGGCCGGGTTCGCCAATGCGCTCACGCCACAATACCTCTTCCTGGCGGCGATTGGCGT CACCATCGGTACAGCAGTCGGTGTGTTGCCGGGCATTGGGCCGGCCCTTACGGTTGCCCTGCTCTTGCCGTTAACCTACA ACTTCGACCCAACCGGTGCCCTGATTATGTTTGCCGGTATCTACTACGGCGGGATGTACGGTGGCTCTACCACCTCAATC TTGCTCAACACACCCGGCGAATCGGCATCGGTAGCCACCACCTTTGAAGGGTTTGCAATGGCGAAAGCCGGGCGGGCCGG CGCAGCCCTGGCGACAGCGGCGATTGGCTCGTTCGTGGCCGGCACCCTCTCGACACTCCTCCTCACCTTTATTGCACCAC TCCTGGCCCGCGTGGCTCTGCTCTTCCAACCGGCAGATTATTTCGCACTCACCGTGCTGGCCTTTGTCAGTGTTACAGCG CTGGTCGGTTCATCAATCATTTGCGGCATGATCAGCCTCTTCATCGGTCTCTTTTTCGGGCTAATCGGGATCGATATCCT CTCTGGTCAGGTACGCCTGACCTTCGGGATTGTCGAATTGCTGGACGGGATCGATGTGGTAGTGGTTGCCGTTGGTCTTT TTGCCGTAGGAGAAGCGCTCTACGTCGCCTCACAGCTCCGCCATAAACGCGAAGAGGTACTCTCCGTCCGCTCGTCCGTC TGGATGAATCGTGACGAGTGGCGACGCTCGTGGCCGGCATGGCTGCGCGGTGCACTCATTGGCTTTCCGTTGGGAGCCTT ACCTGCTGGCGGTGCCGAAATTCCAACCTTCCTCAGTTACACTGTCGAAAAGCGGCTATCTCGCCATAAAGATGAGTGGG GGAAGGGCGCAATTGAGGGTGTGGCCGGACCGGAAGCAGCTAACAATGCCGCCTTTTCGGGAGTACTGGTACCACTGCTA ACACTTGGCTTACCAACATCGGCAACCGCAGCAATCTTACTGGCCGCTTTTCAAATCTACAACCTCCAGCCTGGCCCCCT CTTGTTTCAGCGCTCGCCCGATCTGGTCTGGACGCTGATCGCCAGTCTGTACATTGGGAACGTCATGCTGCTGATCTTGA ATCTCCCTCTCATTCAAATATGGGTGAAGATTCTCACCATTCCGCGACCACTGCTTTACAGTGGGATTCTGGTCTTTGGC ACCCTGGGTGTTTACAGCATGGCGAATAGTTTTGTCGATGTCGTCCTGATGTACGTTATCGGTGTCATCGGCTTCTTCAT GCGTCGTTTCCGCATACCGGTCGGCCCGGCGATTCTGGGGCTGATTCTCCTTCCCCTGGCCGAATCGCAATTCCGCCGGG CACTCGCCATCAGCCAGGGCGATCTAAGCATTTTCATCACCCGACCACTCTCGCTCGGCCTTCTGCTGGCCGCCCTGGCA GCCCTGCTTCTGCCCTACGTACCGGTCATCATTAAGCGCATAACCGGCAAACAGGTGCAGGGTGGCCGACTCGTATTTGG GCGGGGTGAAGAGGATTGA
Upstream 100 bases:
>100_bases CGGCTTTCTGATCGGCCTCATTGTCTATCTCGCTTTCACCCGTCTCCTTGGTGTTCGCCTGCCCGCCGGTATCCTGAGCG GCTTGCTATAGGGATAGTCT
Downstream 100 bases:
>100_bases TCGGGCAATGGTAGTTGTGCCGGATGATACAGAGAACGCTCTCACCCCCGGCCCCTCGCCCGCTGCGCGCTATGCATTAC CCATAACGCGAATACTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MDVIGYLLAGFANALTPQYLFLAAIGVTIGTAVGVLPGIGPALTVALLLPLTYNFDPTGALIMFAGIYYGGMYGGSTTSI LLNTPGESASVATTFEGFAMAKAGRAGAALATAAIGSFVAGTLSTLLLTFIAPLLARVALLFQPADYFALTVLAFVSVTA LVGSSIICGMISLFIGLFFGLIGIDILSGQVRLTFGIVELLDGIDVVVVAVGLFAVGEALYVASQLRHKREEVLSVRSSV WMNRDEWRRSWPAWLRGALIGFPLGALPAGGAEIPTFLSYTVEKRLSRHKDEWGKGAIEGVAGPEAANNAAFSGVLVPLL TLGLPTSATAAILLAAFQIYNLQPGPLLFQRSPDLVWTLIASLYIGNVMLLILNLPLIQIWVKILTIPRPLLYSGILVFG TLGVYSMANSFVDVVLMYVIGVIGFFMRRFRIPVGPAILGLILLPLAESQFRRALAISQGDLSIFITRPLSLGLLLAALA ALLLPYVPVIIKRITGKQVQGGRLVFGRGEED
Sequences:
>Translated_512_residues MDVIGYLLAGFANALTPQYLFLAAIGVTIGTAVGVLPGIGPALTVALLLPLTYNFDPTGALIMFAGIYYGGMYGGSTTSI LLNTPGESASVATTFEGFAMAKAGRAGAALATAAIGSFVAGTLSTLLLTFIAPLLARVALLFQPADYFALTVLAFVSVTA LVGSSIICGMISLFIGLFFGLIGIDILSGQVRLTFGIVELLDGIDVVVVAVGLFAVGEALYVASQLRHKREEVLSVRSSV WMNRDEWRRSWPAWLRGALIGFPLGALPAGGAEIPTFLSYTVEKRLSRHKDEWGKGAIEGVAGPEAANNAAFSGVLVPLL TLGLPTSATAAILLAAFQIYNLQPGPLLFQRSPDLVWTLIASLYIGNVMLLILNLPLIQIWVKILTIPRPLLYSGILVFG TLGVYSMANSFVDVVLMYVIGVIGFFMRRFRIPVGPAILGLILLPLAESQFRRALAISQGDLSIFITRPLSLGLLLAALA ALLLPYVPVIIKRITGKQVQGGRLVFGRGEED >Mature_512_residues MDVIGYLLAGFANALTPQYLFLAAIGVTIGTAVGVLPGIGPALTVALLLPLTYNFDPTGALIMFAGIYYGGMYGGSTTSI LLNTPGESASVATTFEGFAMAKAGRAGAALATAAIGSFVAGTLSTLLLTFIAPLLARVALLFQPADYFALTVLAFVSVTA LVGSSIICGMISLFIGLFFGLIGIDILSGQVRLTFGIVELLDGIDVVVVAVGLFAVGEALYVASQLRHKREEVLSVRSSV WMNRDEWRRSWPAWLRGALIGFPLGALPAGGAEIPTFLSYTVEKRLSRHKDEWGKGAIEGVAGPEAANNAAFSGVLVPLL TLGLPTSATAAILLAAFQIYNLQPGPLLFQRSPDLVWTLIASLYIGNVMLLILNLPLIQIWVKILTIPRPLLYSGILVFG TLGVYSMANSFVDVVLMYVIGVIGFFMRRFRIPVGPAILGLILLPLAESQFRRALAISQGDLSIFITRPLSLGLLLAALA ALLLPYVPVIIKRITGKQVQGGRLVFGRGEED
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 54229; Mature: 54229
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVIGYLLAGFANALTPQYLFLAAIGVTIGTAVGVLPGIGPALTVALLLPLTYNFDPTGA CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHH LIMFAGIYYGGMYGGSTTSILLNTPGESASVATTFEGFAMAKAGRAGAALATAAIGSFVA HHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHH GTLSTLLLTFIAPLLARVALLFQPADYFALTVLAFVSVTALVGSSIICGMISLFIGLFFG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIGIDILSGQVRLTFGIVELLDGIDVVVVAVGLFAVGEALYVASQLRHKREEVLSVRSSV HHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WMNRDEWRRSWPAWLRGALIGFPLGALPAGGAEIPTFLSYTVEKRLSRHKDEWGKGAIEG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCHHCC VAGPEAANNAAFSGVLVPLLTLGLPTSATAAILLAAFQIYNLQPGPLLFQRSPDLVWTLI CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHH ASLYIGNVMLLILNLPLIQIWVKILTIPRPLLYSGILVFGTLGVYSMANSFVDVVLMYVI HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVIGFFMRRFRIPVGPAILGLILLPLAESQFRRALAISQGDLSIFITRPLSLGLLLAALA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHH ALLLPYVPVIIKRITGKQVQGGRLVFGRGEED HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC >Mature Secondary Structure MDVIGYLLAGFANALTPQYLFLAAIGVTIGTAVGVLPGIGPALTVALLLPLTYNFDPTGA CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHH LIMFAGIYYGGMYGGSTTSILLNTPGESASVATTFEGFAMAKAGRAGAALATAAIGSFVA HHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHH GTLSTLLLTFIAPLLARVALLFQPADYFALTVLAFVSVTALVGSSIICGMISLFIGLFFG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIGIDILSGQVRLTFGIVELLDGIDVVVVAVGLFAVGEALYVASQLRHKREEVLSVRSSV HHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WMNRDEWRRSWPAWLRGALIGFPLGALPAGGAEIPTFLSYTVEKRLSRHKDEWGKGAIEG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCHHCC VAGPEAANNAAFSGVLVPLLTLGLPTSATAAILLAAFQIYNLQPGPLLFQRSPDLVWTLI CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHH ASLYIGNVMLLILNLPLIQIWVKILTIPRPLLYSGILVFGTLGVYSMANSFVDVVLMYVI HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVIGFFMRRFRIPVGPAILGLILLPLAESQFRRALAISQGDLSIFITRPLSLGLLLAALA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHH ALLLPYVPVIIKRITGKQVQGGRLVFGRGEED HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]