Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222526253

Identifier: 222526253

GI number: 222526253

Start: 3725020

End: 3725523

Strand: Reverse

Name: 222526253

Synonym: Chy400_3017

Alternate gene names: NA

Gene position: 3725523-3725020 (Counterclockwise)

Preceding gene: 222526254

Following gene: 222526252

Centisome position: 70.71

GC content: 65.48

Gene sequence:

>504_bases
ATGGTAGTTGTGCCGGATGATACAGAGAACGCTCTCACCCCCGGCCCCTCGCCCGCTGCGCGCTATGCATTACCCATAAC
GCGAATACTGCATTGCCCGTGTGCCGGAGCGGGTCGGGGGTGTGATGACGGACGTGCTCCCCAGCCAGGCGCTGGGAGCG
CGCGCCTCTGGCGCGTATGGTGCCGGTACCAGTGCTGGAGGGAGGAACCAGGAGCTGGGAGCGCGCGCCTCTGGCGCGTA
TGGTGCCGGTACCAGTGCTGGAGGGAGGAGCCAGGAGCTGGGAGCGCACGCCTCTGGCGCGTATGGTGCCGGTACCAGTG
CTGGAGGGAGGAGCCAGGAGCAAGCTCCCGCCCCTGGCGGCATTCACGGACGGCCAGGACAGATGATCGAACCCAACGTC
TACCCTATCAGGAAGCTCTGGATCACACGTCTACCCTCCCCTCTCCCGCCCGGCTATGCACAACCCATACCTGGTGTCAA
CCACGTGCGTATCAGCGGGCATGA

Upstream 100 bases:

>100_bases
CTTCTGCCCTACGTACCGGTCATCATTAAGCGCATAACCGGCAAACAGGTGCAGGGTGGCCGACTCGTATTTGGGCGGGG
TGAAGAGGATTGATCGGGCA

Downstream 100 bases:

>100_bases
TCGCTATTGGTGTTGTTTTGAACGACTGGCCCAGTGGCAGTGCGCCGCTCCAGCCGTGGTATCACGTGCTGAATGGGTTG
CCTTACACGCGCCTCATGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MVVVPDDTENALTPGPSPAARYALPITRILHCPCAGAGRGCDDGRAPQPGAGSARLWRVWCRYQCWREEPGAGSARLWRV
WCRYQCWREEPGAGSARLWRVWCRYQCWREEPGASSRPWRHSRTARTDDRTQRLPYQEALDHTSTLPSPARLCTTHTWCQ
PRAYQRA

Sequences:

>Translated_167_residues
MVVVPDDTENALTPGPSPAARYALPITRILHCPCAGAGRGCDDGRAPQPGAGSARLWRVWCRYQCWREEPGAGSARLWRV
WCRYQCWREEPGAGSARLWRVWCRYQCWREEPGASSRPWRHSRTARTDDRTQRLPYQEALDHTSTLPSPARLCTTHTWCQ
PRAYQRA
>Mature_167_residues
MVVVPDDTENALTPGPSPAARYALPITRILHCPCAGAGRGCDDGRAPQPGAGSARLWRVWCRYQCWREEPGAGSARLWRV
WCRYQCWREEPGAGSARLWRVWCRYQCWREEPGASSRPWRHSRTARTDDRTQRLPYQEALDHTSTLPSPARLCTTHTWCQ
PRAYQRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19180; Mature: 19180

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
6.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVVPDDTENALTPGPSPAARYALPITRILHCPCAGAGRGCDDGRAPQPGAGSARLWRVW
CEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
CRYQCWREEPGAGSARLWRVWCRYQCWREEPGAGSARLWRVWCRYQCWREEPGASSRPWR
HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
HSRTARTDDRTQRLPYQEALDHTSTLPSPARLCTTHTWCQPRAYQRA
CCCCCCCCCHHHCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVVVPDDTENALTPGPSPAARYALPITRILHCPCAGAGRGCDDGRAPQPGAGSARLWRVW
CEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
CRYQCWREEPGAGSARLWRVWCRYQCWREEPGAGSARLWRVWCRYQCWREEPGASSRPWR
HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
HSRTARTDDRTQRLPYQEALDHTSTLPSPARLCTTHTWCQPRAYQRA
CCCCCCCCCHHHCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA