| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is hyaD [C]
Identifier: 222526232
GI number: 222526232
Start: 3697661
End: 3698176
Strand: Reverse
Name: hyaD [C]
Synonym: Chy400_2994
Alternate gene names: 222526232
Gene position: 3698176-3697661 (Counterclockwise)
Preceding gene: 222526233
Following gene: 222526231
Centisome position: 70.19
GC content: 61.05
Gene sequence:
>516_bases ATGGCTGAACAGTTGCTGATAATCGGGTGTGGCAATCTGCTGCGCGGCGATGATGCCGTCGGGCCGGTGCTGGTGCGGCG AGTGCTGGAACTGGGGTTACCACCCGGCGTCGGTGTCGCCGATGCCGGTACCAGCGGGATGGATGTTGCCTTCCGTATGC GCGGCGTCGAGACAATCATTCTGGTTGACGCTGCCCGCACCGGCGCCGACCCCGGCACGATCTATTACGTACCGGGGTCT GTCGTTGAACACCTGCCACCTCTCAGCGGGATCAATCTGCACGCCTTTCGCTGGGATCATGCACTGGCGTTCGGGCGCTG GTTACTCAAAGACGAGTATCCCCGTTCGGTGCAGGTCTATTTGATCGAAGGGGCCGATTTCACAATTGGCGCTCCGCTCA GTCCGGCTGTGGCAGCCCGCATGGAAGACCTGGCCCGTCATCTCAGCCACAACCCGTGGCAGCCGTACCCTGGACACGCA ATTGATGAACAACACAATGGAGACCTGGCAGCTTGA
Upstream 100 bases:
>100_bases CAAGCGCGCAGGAACGTCTGCACCGGTACTGGTCACCATGCCGGTGCAGACGAACTCGCATTGTTCGTGCTGGCAATATC TGAACAGGTACGATCACGGT
Downstream 100 bases:
>100_bases ATTAACCGCGCAGGGCTATCTGCATCTACCCGCAGCCCTGGCCCAACGCTACTTTCCGACCGATTTGCTGGTTGTCCTTC CCCAGGCCGACGAAATCTGG
Product: hydrogenase maturation protease
Products: NA
Alternate protein names: Peptidase; Ni Fe-Hydrogenase Maturation Factor
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MAEQLLIIGCGNLLRGDDAVGPVLVRRVLELGLPPGVGVADAGTSGMDVAFRMRGVETIILVDAARTGADPGTIYYVPGS VVEHLPPLSGINLHAFRWDHALAFGRWLLKDEYPRSVQVYLIEGADFTIGAPLSPAVAARMEDLARHLSHNPWQPYPGHA IDEQHNGDLAA
Sequences:
>Translated_171_residues MAEQLLIIGCGNLLRGDDAVGPVLVRRVLELGLPPGVGVADAGTSGMDVAFRMRGVETIILVDAARTGADPGTIYYVPGS VVEHLPPLSGINLHAFRWDHALAFGRWLLKDEYPRSVQVYLIEGADFTIGAPLSPAVAARMEDLARHLSHNPWQPYPGHA IDEQHNGDLAA >Mature_170_residues AEQLLIIGCGNLLRGDDAVGPVLVRRVLELGLPPGVGVADAGTSGMDVAFRMRGVETIILVDAARTGADPGTIYYVPGSV VEHLPPLSGINLHAFRWDHALAFGRWLLKDEYPRSVQVYLIEGADFTIGAPLSPAVAARMEDLARHLSHNPWQPYPGHAI DEQHNGDLAA
Specific function: Protease Involved In The C-Terminal Processing Of Hyab, The Large Subunit Of Hydrogenase 1 (Potential). [C]
COG id: COG0680
COG function: function code C; Ni,Fe-hydrogenase maturation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.24.- [C]
Molecular weight: Translated: 18363; Mature: 18232
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQLLIIGCGNLLRGDDAVGPVLVRRVLELGLPPGVGVADAGTSGMDVAFRMRGVETII CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEE LVDAARTGADPGTIYYVPGSVVEHLPPLSGINLHAFRWDHALAFGRWLLKDEYPRSVQVY EEECCCCCCCCCEEEECCCHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEEEE LIEGADFTIGAPLSPAVAARMEDLARHLSHNPWQPYPGHAIDEQHNGDLAA EECCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AEQLLIIGCGNLLRGDDAVGPVLVRRVLELGLPPGVGVADAGTSGMDVAFRMRGVETII CCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEE LVDAARTGADPGTIYYVPGSVVEHLPPLSGINLHAFRWDHALAFGRWLLKDEYPRSVQVY EEECCCCCCCCCEEEECCCHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEEEE LIEGADFTIGAPLSPAVAARMEDLARHLSHNPWQPYPGHAIDEQHNGDLAA EECCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Ni [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA