Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is hyaD [C]

Identifier: 222526232

GI number: 222526232

Start: 3697661

End: 3698176

Strand: Reverse

Name: hyaD [C]

Synonym: Chy400_2994

Alternate gene names: 222526232

Gene position: 3698176-3697661 (Counterclockwise)

Preceding gene: 222526233

Following gene: 222526231

Centisome position: 70.19

GC content: 61.05

Gene sequence:

>516_bases
ATGGCTGAACAGTTGCTGATAATCGGGTGTGGCAATCTGCTGCGCGGCGATGATGCCGTCGGGCCGGTGCTGGTGCGGCG
AGTGCTGGAACTGGGGTTACCACCCGGCGTCGGTGTCGCCGATGCCGGTACCAGCGGGATGGATGTTGCCTTCCGTATGC
GCGGCGTCGAGACAATCATTCTGGTTGACGCTGCCCGCACCGGCGCCGACCCCGGCACGATCTATTACGTACCGGGGTCT
GTCGTTGAACACCTGCCACCTCTCAGCGGGATCAATCTGCACGCCTTTCGCTGGGATCATGCACTGGCGTTCGGGCGCTG
GTTACTCAAAGACGAGTATCCCCGTTCGGTGCAGGTCTATTTGATCGAAGGGGCCGATTTCACAATTGGCGCTCCGCTCA
GTCCGGCTGTGGCAGCCCGCATGGAAGACCTGGCCCGTCATCTCAGCCACAACCCGTGGCAGCCGTACCCTGGACACGCA
ATTGATGAACAACACAATGGAGACCTGGCAGCTTGA

Upstream 100 bases:

>100_bases
CAAGCGCGCAGGAACGTCTGCACCGGTACTGGTCACCATGCCGGTGCAGACGAACTCGCATTGTTCGTGCTGGCAATATC
TGAACAGGTACGATCACGGT

Downstream 100 bases:

>100_bases
ATTAACCGCGCAGGGCTATCTGCATCTACCCGCAGCCCTGGCCCAACGCTACTTTCCGACCGATTTGCTGGTTGTCCTTC
CCCAGGCCGACGAAATCTGG

Product: hydrogenase maturation protease

Products: NA

Alternate protein names: Peptidase; Ni Fe-Hydrogenase Maturation Factor

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MAEQLLIIGCGNLLRGDDAVGPVLVRRVLELGLPPGVGVADAGTSGMDVAFRMRGVETIILVDAARTGADPGTIYYVPGS
VVEHLPPLSGINLHAFRWDHALAFGRWLLKDEYPRSVQVYLIEGADFTIGAPLSPAVAARMEDLARHLSHNPWQPYPGHA
IDEQHNGDLAA

Sequences:

>Translated_171_residues
MAEQLLIIGCGNLLRGDDAVGPVLVRRVLELGLPPGVGVADAGTSGMDVAFRMRGVETIILVDAARTGADPGTIYYVPGS
VVEHLPPLSGINLHAFRWDHALAFGRWLLKDEYPRSVQVYLIEGADFTIGAPLSPAVAARMEDLARHLSHNPWQPYPGHA
IDEQHNGDLAA
>Mature_170_residues
AEQLLIIGCGNLLRGDDAVGPVLVRRVLELGLPPGVGVADAGTSGMDVAFRMRGVETIILVDAARTGADPGTIYYVPGSV
VEHLPPLSGINLHAFRWDHALAFGRWLLKDEYPRSVQVYLIEGADFTIGAPLSPAVAARMEDLARHLSHNPWQPYPGHAI
DEQHNGDLAA

Specific function: Protease Involved In The C-Terminal Processing Of Hyab, The Large Subunit Of Hydrogenase 1 (Potential). [C]

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.24.- [C]

Molecular weight: Translated: 18363; Mature: 18232

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEQLLIIGCGNLLRGDDAVGPVLVRRVLELGLPPGVGVADAGTSGMDVAFRMRGVETII
CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEE
LVDAARTGADPGTIYYVPGSVVEHLPPLSGINLHAFRWDHALAFGRWLLKDEYPRSVQVY
EEECCCCCCCCCEEEECCCHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEEEE
LIEGADFTIGAPLSPAVAARMEDLARHLSHNPWQPYPGHAIDEQHNGDLAA
EECCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AEQLLIIGCGNLLRGDDAVGPVLVRRVLELGLPPGVGVADAGTSGMDVAFRMRGVETII
CCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEE
LVDAARTGADPGTIYYVPGSVVEHLPPLSGINLHAFRWDHALAFGRWLLKDEYPRSVQVY
EEECCCCCCCCCEEEECCCHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEEEE
LIEGADFTIGAPLSPAVAARMEDLARHLSHNPWQPYPGHAIDEQHNGDLAA
EECCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Ni [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA