| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yhgI [C]
Identifier: 222526228
GI number: 222526228
Start: 3694917
End: 3695774
Strand: Reverse
Name: yhgI [C]
Synonym: Chy400_2990
Alternate gene names: 222526228
Gene position: 3695774-3694917 (Counterclockwise)
Preceding gene: 222526229
Following gene: 222526227
Centisome position: 70.14
GC content: 59.91
Gene sequence:
>858_bases ATGACCCAACAACTTCCTGCTACTGATGACCTTGAACAGATCGCAGCGCGGGTTGATGCCGCAGTCGCGGCTGTAGCCGG TCTGGAACCTGCGGCTCAGACCGTTGCGCTTGAGCTAAAACAGGCCATCGAGGCATTTCACAAACTGGCGCTCACGACGA TGGTTCGCCATCTGAAGCACGATCCACGCGGCAAAGAGTTGCTGCTCGAACTGGTTGCCGATCCCGCCGTGTACGCCATG CTGCTGATGCACGGTATCGTGCGCGCCGATCCCATCACCCGCGCCCGCCGCGTGCTCGATAGCGCCCGCCCCTATATGCA GTCACACGGCGGTGATGCCGAGCTGATTGATGTTCGCGATGGGGTGGCCTACCTGCGCCTGCATGGTTCGTGCAATGGCT GCTCGCTGTCGGCATTTACCCTGCGCAAACACGTCGAAGAGGTACTCTTGCGCGAAGTGCCGGAGATCACTCGTCTCGAA GTGGTAAACGATCAGCCAGCACCGGCTATGTTACGCGCTGAAGCCCAAACCCATCCCGATCCGGCAAAAGGATGGGTGCA GGGACCGGCAGTCACTGCCGTTCCACCAGGGCAAATGATCAGTTTCACCACCGACCAGACCAGCGTGCTGATTGTCAATC TGGAGAATCGTTTAAGCGCTTACCGCAACGCATGCGCTCATCAGGGTCGCCCGCTCGACGGCGGTGTCCTCGATCCCGCC AACGGCACCCTCACCTGCCCATGGCACGGCTTTTGCTTCGACGTGACCAGTGGTGAATGTCTGACTGCGCCCCAGGCCCA ACTCGAACCGTTTCCGTTGCGGGTGGTGGATGGGATGATCTGGGTACGACCATTATGA
Upstream 100 bases:
>100_bases CAAACGATGGCCAGACAGGCGTTCGCCGAATTGCTGGCCATGCGTAGCGAAGAAGTGCTCGAACAGATGATTGGCTATGC CGGCTAGAGATGAGACGGGT
Downstream 100 bases:
>100_bases TCACGCTGCAAACGATGCGCTGGCTGGGAGCACCGGCACCAGGCGGACTGGCGTTACCGGCAGCAGACGCCGCGCCGACA AATCTCTATGCGCCACGTGG
Product: Rieske (2Fe-2S) domain-containing protein
Products: NA
Alternate protein names: Nitrogen-Fixing NifU Domain-Containing Protein; Rieske Domain Protein; Rieske Domain-Containing Protein; NifU Domain-Containing Protein; Nitrogen-Fixing NifU-Like; Rieske Iron-Sulfur Domain-Containing Protein; Nitrogen Fixation Protein; Rieske Iron-Sulfur Protein; Nitrogen-Fixing NifU Rieske Region; Fe-S Cluster Assembly Protein Nifu-Like; Nitrogen-Fixing NifU-Like Protein; Nitrogen-Fixing Nifu Domain Protein; Iron-Sulfur Cluster Assembly Protein; NifU-Like Protein
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MTQQLPATDDLEQIAARVDAAVAAVAGLEPAAQTVALELKQAIEAFHKLALTTMVRHLKHDPRGKELLLELVADPAVYAM LLMHGIVRADPITRARRVLDSARPYMQSHGGDAELIDVRDGVAYLRLHGSCNGCSLSAFTLRKHVEEVLLREVPEITRLE VVNDQPAPAMLRAEAQTHPDPAKGWVQGPAVTAVPPGQMISFTTDQTSVLIVNLENRLSAYRNACAHQGRPLDGGVLDPA NGTLTCPWHGFCFDVTSGECLTAPQAQLEPFPLRVVDGMIWVRPL
Sequences:
>Translated_285_residues MTQQLPATDDLEQIAARVDAAVAAVAGLEPAAQTVALELKQAIEAFHKLALTTMVRHLKHDPRGKELLLELVADPAVYAM LLMHGIVRADPITRARRVLDSARPYMQSHGGDAELIDVRDGVAYLRLHGSCNGCSLSAFTLRKHVEEVLLREVPEITRLE VVNDQPAPAMLRAEAQTHPDPAKGWVQGPAVTAVPPGQMISFTTDQTSVLIVNLENRLSAYRNACAHQGRPLDGGVLDPA NGTLTCPWHGFCFDVTSGECLTAPQAQLEPFPLRVVDGMIWVRPL >Mature_284_residues TQQLPATDDLEQIAARVDAAVAAVAGLEPAAQTVALELKQAIEAFHKLALTTMVRHLKHDPRGKELLLELVADPAVYAML LMHGIVRADPITRARRVLDSARPYMQSHGGDAELIDVRDGVAYLRLHGSCNGCSLSAFTLRKHVEEVLLREVPEITRLEV VNDQPAPAMLRAEAQTHPDPAKGWVQGPAVTAVPPGQMISFTTDQTSVLIVNLENRLSAYRNACAHQGRPLDGGVLDPAN GTLTCPWHGFCFDVTSGECLTAPQAQLEPFPLRVVDGMIWVRPL
Specific function: Unknown
COG id: COG0694
COG function: function code O; Thioredoxin-like proteins and domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30961; Mature: 30830
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQLPATDDLEQIAARVDAAVAAVAGLEPAAQTVALELKQAIEAFHKLALTTMVRHLKH CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DPRGKELLLELVADPAVYAMLLMHGIVRADPITRARRVLDSARPYMQSHGGDAELIDVRD CCCHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECC GVAYLRLHGSCNGCSLSAFTLRKHVEEVLLREVPEITRLEVVNDQPAPAMLRAEAQTHPD CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHEEHHCCCCCC PAKGWVQGPAVTAVPPGQMISFTTDQTSVLIVNLENRLSAYRNACAHQGRPLDGGVLDPA CCCCCCCCCEEEECCCCCEEEEECCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCEECCC NGTLTCPWHGFCFDVTSGECLTAPQAQLEPFPLRVVDGMIWVRPL CCEEECCCCCEEEECCCCCEECCCHHHCCCCCHHHHCCEEEEECC >Mature Secondary Structure TQQLPATDDLEQIAARVDAAVAAVAGLEPAAQTVALELKQAIEAFHKLALTTMVRHLKH CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DPRGKELLLELVADPAVYAMLLMHGIVRADPITRARRVLDSARPYMQSHGGDAELIDVRD CCCHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECC GVAYLRLHGSCNGCSLSAFTLRKHVEEVLLREVPEITRLEVVNDQPAPAMLRAEAQTHPD CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHEEHHCCCCCC PAKGWVQGPAVTAVPPGQMISFTTDQTSVLIVNLENRLSAYRNACAHQGRPLDGGVLDPA CCCCCCCCCEEEECCCCCEEEEECCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCEECCC NGTLTCPWHGFCFDVTSGECLTAPQAQLEPFPLRVVDGMIWVRPL CCEEECCCCCEEEECCCCCEECCCHHHCCCCCHHHHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA