| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526227
Identifier: 222526227
GI number: 222526227
Start: 3693808
End: 3694920
Strand: Reverse
Name: 222526227
Synonym: Chy400_2989
Alternate gene names: NA
Gene position: 3694920-3693808 (Counterclockwise)
Preceding gene: 222526228
Following gene: 222526226
Centisome position: 70.13
GC content: 61.99
Gene sequence:
>1113_bases ATGATCACGCTGCAAACGATGCGCTGGCTGGGAGCACCGGCACCAGGCGGACTGGCGTTACCGGCAGCAGACGCCGCGCC GACAAATCTCTATGCGCCACGTGGTGTCTATCTCGACCAGCAGCGCCTGATCGCCGTTGACACCGGCAATCATCGGGTAT TGATCTGGCAACAGCTCCCGGTGCGCGATCATCAACCCGCCGATCTCGTGCTTGGGCAGCCCGACTTCACGCACGAAGGG CCGCGTGCAGCCGGACGTGGCCCGGCCAACGGATTTCACGTGCCAACCGGAGTCACGGTAGCTGAAGGGCGACTCTACCT TGCCGATGCCTGGCATCATCGTGTATTATGTTGGCATCGATTTCCCGAACGATCCGACACACCACCCGACAGTGTCATCG GCCAGGCTAACCTGCTTGAGATTGAGCCAAACCGTGGTGGCGCAGTTGGGCCTACGACACTGTACTGGCCGTATGGAGTA GCATGGATCGCGGGCTGGTTTTATATTGCAGATACCGGCAATCGCCGGGTGTTGGGATGGCGCGGATTACCAGAACCCAC TCAACCGCCCGATCTGATTCTGGGGCAACCGGATGGATGGAGCAATGCGGAAAATCGTGGTGGCCCGCCGACGGCGCACA GCTTTCGCTGGCCGCACGCCCTGGCCGGCGATGGCACCACGCTCTACGTTGCCGATGCCGGGAATCACCGCGTTTTAGCC TGGACACCACCACCAACCGATGACCGACCGGCCGATCTGGTCTTGGGGCAAACCGATATGCAAAGCGCGTTTGAACAACC ACACGTACCCCAGGGAGCGCATCGCCTCCGCTTTCCCTACGCAGTTGCCTGTACTGCGGATCGACTATGCGTAGCCGATA CGGCAAACAATCGGCTCCTGGTCTGGCAACCTCTCCCGCGTCACGGGGCCGGGCTTCCGGCCCAGGCCGTCTTCGGCCAG GCCGACTTTGCCGGTAGTGGGGAAAACCGCTGGCAAGCCATCGCTCCCGACACCCTCTGCTGGCCCTACGGCCTGTGTGC GCACCAGCAGTGGCTGGCCATCGCCGATTCGGGGAATAATCGAATCATCATCGGGCAATGGGCGGATGGGTAG
Upstream 100 bases:
>100_bases GCTTCGACGTGACCAGTGGTGAATGTCTGACTGCGCCCCAGGCCCAACTCGAACCGTTTCCGTTGCGGGTGGTGGATGGG ATGATCTGGGTACGACCATT
Downstream 100 bases:
>100_bases GCAAAGGCAATACCTTCGGCCACCCCAGGAGAAGGTTGTGAATAGCAAAAATCGCACGACTCCTGTCTGACGATATGTGA AAGGAATGATCGTATGTGTC
Product: NHL repeat containing protein
Products: NA
Alternate protein names: NHL Repeat-Containing Protein; NHL Repeat Protein
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MITLQTMRWLGAPAPGGLALPAADAAPTNLYAPRGVYLDQQRLIAVDTGNHRVLIWQQLPVRDHQPADLVLGQPDFTHEG PRAAGRGPANGFHVPTGVTVAEGRLYLADAWHHRVLCWHRFPERSDTPPDSVIGQANLLEIEPNRGGAVGPTTLYWPYGV AWIAGWFYIADTGNRRVLGWRGLPEPTQPPDLILGQPDGWSNAENRGGPPTAHSFRWPHALAGDGTTLYVADAGNHRVLA WTPPPTDDRPADLVLGQTDMQSAFEQPHVPQGAHRLRFPYAVACTADRLCVADTANNRLLVWQPLPRHGAGLPAQAVFGQ ADFAGSGENRWQAIAPDTLCWPYGLCAHQQWLAIADSGNNRIIIGQWADG
Sequences:
>Translated_370_residues MITLQTMRWLGAPAPGGLALPAADAAPTNLYAPRGVYLDQQRLIAVDTGNHRVLIWQQLPVRDHQPADLVLGQPDFTHEG PRAAGRGPANGFHVPTGVTVAEGRLYLADAWHHRVLCWHRFPERSDTPPDSVIGQANLLEIEPNRGGAVGPTTLYWPYGV AWIAGWFYIADTGNRRVLGWRGLPEPTQPPDLILGQPDGWSNAENRGGPPTAHSFRWPHALAGDGTTLYVADAGNHRVLA WTPPPTDDRPADLVLGQTDMQSAFEQPHVPQGAHRLRFPYAVACTADRLCVADTANNRLLVWQPLPRHGAGLPAQAVFGQ ADFAGSGENRWQAIAPDTLCWPYGLCAHQQWLAIADSGNNRIIIGQWADG >Mature_370_residues MITLQTMRWLGAPAPGGLALPAADAAPTNLYAPRGVYLDQQRLIAVDTGNHRVLIWQQLPVRDHQPADLVLGQPDFTHEG PRAAGRGPANGFHVPTGVTVAEGRLYLADAWHHRVLCWHRFPERSDTPPDSVIGQANLLEIEPNRGGAVGPTTLYWPYGV AWIAGWFYIADTGNRRVLGWRGLPEPTQPPDLILGQPDGWSNAENRGGPPTAHSFRWPHALAGDGTTLYVADAGNHRVLA WTPPPTDDRPADLVLGQTDMQSAFEQPHVPQGAHRLRFPYAVACTADRLCVADTANNRLLVWQPLPRHGAGLPAQAVFGQ ADFAGSGENRWQAIAPDTLCWPYGLCAHQQWLAIADSGNNRIIIGQWADG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40299; Mature: 40299
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLQTMRWLGAPAPGGLALPAADAAPTNLYAPRGVYLDQQRLIAVDTGNHRVLIWQQLP CEEEEEHHHHCCCCCCCEECCCCCCCCCCCCCCCCEEECCCEEEEEECCCCEEEEEEECC VRDHQPADLVLGQPDFTHEGPRAAGRGPANGFHVPTGVTVAEGRLYLADAWHHRVLCWHR CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEECCCCCEEECCEEEEEECCCCEEEEEEC FPERSDTPPDSVIGQANLLEIEPNRGGAVGPTTLYWPYGVAWIAGWFYIADTGNRRVLGW CCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCEEECCCHHHEEEEEEEEEECCCEEEEEE RGLPEPTQPPDLILGQPDGWSNAENRGGPPTAHSFRWPHALAGDGTTLYVADAGNHRVLA CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEECCCCEEEE WTPPPTDDRPADLVLGQTDMQSAFEQPHVPQGAHRLRFPYAVACTADRLCVADTANNRLL ECCCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCEECCCEEEEECCCCEEEEECCCCEEE VWQPLPRHGAGLPAQAVFGQADFAGSGENRWQAIAPDTLCWPYGLCAHQQWLAIADSGNN EEECCCCCCCCCCHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCC RIIIGQWADG EEEEEECCCC >Mature Secondary Structure MITLQTMRWLGAPAPGGLALPAADAAPTNLYAPRGVYLDQQRLIAVDTGNHRVLIWQQLP CEEEEEHHHHCCCCCCCEECCCCCCCCCCCCCCCCEEECCCEEEEEECCCCEEEEEEECC VRDHQPADLVLGQPDFTHEGPRAAGRGPANGFHVPTGVTVAEGRLYLADAWHHRVLCWHR CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEECCCCCEEECCEEEEEECCCCEEEEEEC FPERSDTPPDSVIGQANLLEIEPNRGGAVGPTTLYWPYGVAWIAGWFYIADTGNRRVLGW CCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCEEECCCHHHEEEEEEEEEECCCEEEEEE RGLPEPTQPPDLILGQPDGWSNAENRGGPPTAHSFRWPHALAGDGTTLYVADAGNHRVLA CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEECCCCEEEE WTPPPTDDRPADLVLGQTDMQSAFEQPHVPQGAHRLRFPYAVACTADRLCVADTANNRLL ECCCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCEECCCEEEEECCCCEEEEECCCCEEE VWQPLPRHGAGLPAQAVFGQADFAGSGENRWQAIAPDTLCWPYGLCAHQQWLAIADSGNN EEECCCCCCCCCCHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCC RIIIGQWADG EEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA