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The map label for this gene is yfbS [H]

Identifier: 222526190

GI number: 222526190

Start: 3642248

End: 3644089

Strand: Direct

Name: yfbS [H]

Synonym: Chy400_2949

Alternate gene names: 222526190

Gene position: 3642248-3644089 (Clockwise)

Preceding gene: 222526189

Following gene: 222526197

Centisome position: 69.13

GC content: 57.06

Gene sequence:

>1842_bases
ATGACATTTGACATCATTCTGGTCTTTTCCATCCTGCTCTGCGTGATTGTCCTTTTCACCACTGATCGAATCCGGATCGA
TCTCGTAGCAGTGCTCGGTATGCTTGCACTGATGCTCGGTGGGATTCTGACCCCGGCTGAAGCAGTCGCCGGTTTTGGTG
ATACGACGGTCATATTGATTGCGGCATTGATGATTGTTGGTGATGGGTTACTTCAGACCGGGGTTGCGGCCTGGATTGGG
AATAAACTCGGTAGTATCGCCGGGCAGAGTGAGCGCCGGATGCTGGTAACTTTGATGGTTCCGGTTGCGTTCCTGTCGGC
GTTTATCAGCTCGACCGGTACCGTGGCAATTATGATTCCGGTGGCGCTGAGTCTGGCTCGCCGGGCAGGGATTAGCCCTG
CCCGCCTGCTGTTACCGCTCGCCTATGCTGCGCTCACCGGTGGTATGTTGACGTTGATCGGAACGCCACCCAATCTGATT
GCGGCAGAGGCATTGGTCAGTGCCGGGCGGCCACCTCTCGGCTTTTTCAGCTTTACGCCAATTGGGATGACCATCCTGGT
CATGATCACGCTCACCGTGGCCTGGTTTGGCCACTGGCTGTTACCGGTGCGCGATGTACCGGTGTCAGAAGTGGAGCGGG
GGCCAACCCTGGCCGAACTGGCTGCTGACTATTTCCTGACCAAAGACCTTGTGCAGGTACGGGTGTTAGCTGATTCGCCA
CTGGCCGGACACACGCTGTCTGAACTGCGGCTCCAGAATCGCTACGGTATTACGGTTGTTGGGGTACGACGCTGGCCTGG
ATCACGGCCAGAACCGGGGTCACCACGGGCCGTTACGTCGGCAACGCGGATTCTGGCAGGTGATCTTCTCGATGTGATAG
GCGACGAAGGCGCAATCGAACGATTTTGCCGCCAGGAGGGAGTTGTTGTCCAGTCCCTATCGTCGAGTCTTCCATTCGGG
CCAGATCTTCACATCATGGAAGTGGCATTAACACCGCGCTCGCGCTTTGAAGGGCAGACTATTGCCAGGGCGGAATTATG
TCAGCTTTTCGGTGTGACCGTGTTGGGGGTACGACGTCTCGGTCAGCCATTTCAAGGCGATCTTGTCAACGAGCCGTTAC
GCTTCGGTGATACGCTGCTGGTGGCAGGTGCTCCTGATCAATTACAGGAAATTGTTCGGACACAGCAAACCGCTGGCGAT
CTGGTGGTGGTCGCCTTCCCACGCGATATGGCAATAACCGGTCATCGGCTTGATTGGCGTTCCTGGACGGCAATGACCAT
CATGATCCTCATGTTGATCGTTATGGCCGCCGGTTGGTTGCCGGTTGTGACCGCCGCCTTGCTGGCCGCAGTCGCCATGG
TGTTGAGCGGTTGCGTGCCGCTCAGTGGGGTCTATCGTCGACTCAACTGGGAGAGTCTGGTCCTGATTGCTGCGATGCTG
CCGATGGCAACTGCGCTCAAGAAGACTGGCGGGGCAGCATTCATCGCTGAACAACTGGTCAGCGTGCTGGGTGACTTTTC
ACCATTGGTTGTGCTGGCCGGTATCTTCATCGTTACCAGCCTGTTGAGCCAGTTCATCTCGAATACGGCGACTGCCGTCC
TCATTATGCCGATTGCCCTCGGCGTTGCCGATCAATTGACCCTGGCCCCCGAACCTCTGTTGATCACGGCAGCACTTGCG
GCCTCGACCGCCTTCGCTACCCCGATTGCTTCCCCGGTGAACACGTTGGTGCTGGCACCCGGCGAATATCGCTTTATTGA
CTATGTCCGAGCTGGTGTCCCGCTGCAATTGCTCGTGATGGTGATTTGTCTGATCCTGGTGCCGGTCTTCTTTCCGTGGT
AA

Upstream 100 bases:

>100_bases
TCACGGGGATACTGGATGTGCTCGTTACCATTAGAGAGTCGGTCAGAGAGGTATTAGATAACTTCTCGTAAGCGTTTTTG
AGATAGGTTCGAGCCAGCTC

Downstream 100 bases:

>100_bases
TGTACGCTACCAGATTCCGGCCATCTCCCACACCCGTCCGGCAAGGAGATCAACCGCAGCCTCGTCGGCACAAATCGCAA
TACCCGTGCTGTCAGGGCGG

Product: citrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 613; Mature: 612

Protein sequence:

>613_residues
MTFDIILVFSILLCVIVLFTTDRIRIDLVAVLGMLALMLGGILTPAEAVAGFGDTTVILIAALMIVGDGLLQTGVAAWIG
NKLGSIAGQSERRMLVTLMVPVAFLSAFISSTGTVAIMIPVALSLARRAGISPARLLLPLAYAALTGGMLTLIGTPPNLI
AAEALVSAGRPPLGFFSFTPIGMTILVMITLTVAWFGHWLLPVRDVPVSEVERGPTLAELAADYFLTKDLVQVRVLADSP
LAGHTLSELRLQNRYGITVVGVRRWPGSRPEPGSPRAVTSATRILAGDLLDVIGDEGAIERFCRQEGVVVQSLSSSLPFG
PDLHIMEVALTPRSRFEGQTIARAELCQLFGVTVLGVRRLGQPFQGDLVNEPLRFGDTLLVAGAPDQLQEIVRTQQTAGD
LVVVAFPRDMAITGHRLDWRSWTAMTIMILMLIVMAAGWLPVVTAALLAAVAMVLSGCVPLSGVYRRLNWESLVLIAAML
PMATALKKTGGAAFIAEQLVSVLGDFSPLVVLAGIFIVTSLLSQFISNTATAVLIMPIALGVADQLTLAPEPLLITAALA
ASTAFATPIASPVNTLVLAPGEYRFIDYVRAGVPLQLLVMVICLILVPVFFPW

Sequences:

>Translated_613_residues
MTFDIILVFSILLCVIVLFTTDRIRIDLVAVLGMLALMLGGILTPAEAVAGFGDTTVILIAALMIVGDGLLQTGVAAWIG
NKLGSIAGQSERRMLVTLMVPVAFLSAFISSTGTVAIMIPVALSLARRAGISPARLLLPLAYAALTGGMLTLIGTPPNLI
AAEALVSAGRPPLGFFSFTPIGMTILVMITLTVAWFGHWLLPVRDVPVSEVERGPTLAELAADYFLTKDLVQVRVLADSP
LAGHTLSELRLQNRYGITVVGVRRWPGSRPEPGSPRAVTSATRILAGDLLDVIGDEGAIERFCRQEGVVVQSLSSSLPFG
PDLHIMEVALTPRSRFEGQTIARAELCQLFGVTVLGVRRLGQPFQGDLVNEPLRFGDTLLVAGAPDQLQEIVRTQQTAGD
LVVVAFPRDMAITGHRLDWRSWTAMTIMILMLIVMAAGWLPVVTAALLAAVAMVLSGCVPLSGVYRRLNWESLVLIAAML
PMATALKKTGGAAFIAEQLVSVLGDFSPLVVLAGIFIVTSLLSQFISNTATAVLIMPIALGVADQLTLAPEPLLITAALA
ASTAFATPIASPVNTLVLAPGEYRFIDYVRAGVPLQLLVMVICLILVPVFFPW
>Mature_612_residues
TFDIILVFSILLCVIVLFTTDRIRIDLVAVLGMLALMLGGILTPAEAVAGFGDTTVILIAALMIVGDGLLQTGVAAWIGN
KLGSIAGQSERRMLVTLMVPVAFLSAFISSTGTVAIMIPVALSLARRAGISPARLLLPLAYAALTGGMLTLIGTPPNLIA
AEALVSAGRPPLGFFSFTPIGMTILVMITLTVAWFGHWLLPVRDVPVSEVERGPTLAELAADYFLTKDLVQVRVLADSPL
AGHTLSELRLQNRYGITVVGVRRWPGSRPEPGSPRAVTSATRILAGDLLDVIGDEGAIERFCRQEGVVVQSLSSSLPFGP
DLHIMEVALTPRSRFEGQTIARAELCQLFGVTVLGVRRLGQPFQGDLVNEPLRFGDTLLVAGAPDQLQEIVRTQQTAGDL
VVVAFPRDMAITGHRLDWRSWTAMTIMILMLIVMAAGWLPVVTAALLAAVAMVLSGCVPLSGVYRRLNWESLVLIAAMLP
MATALKKTGGAAFIAEQLVSVLGDFSPLVVLAGIFIVTSLLSQFISNTATAVLIMPIALGVADQLTLAPEPLLITAALAA
STAFATPIASPVNTLVLAPGEYRFIDYVRAGVPLQLLVMVICLILVPVFFPW

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=620, Percent_Identity=38.0645161290323, Blast_Score=377, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004680
- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF03600 CitMHS; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 65104; Mature: 64972

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFDIILVFSILLCVIVLFTTDRIRIDLVAVLGMLALMLGGILTPAEAVAGFGDTTVILI
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHH
AALMIVGDGLLQTGVAAWIGNKLGSIAGQSERRMLVTLMVPVAFLSAFISSTGTVAIMIP
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHH
VALSLARRAGISPARLLLPLAYAALTGGMLTLIGTPPNLIAAEALVSAGRPPLGFFSFTP
HHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCH
IGMTILVMITLTVAWFGHWLLPVRDVPVSEVERGPTLAELAADYFLTKDLVQVRVLADSP
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCC
LAGHTLSELRLQNRYGITVVGVRRWPGSRPEPGSPRAVTSATRILAGDLLDVIGDEGAIE
CCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH
RFCRQEGVVVQSLSSSLPFGPDLHIMEVALTPRSRFEGQTIARAELCQLFGVTVLGVRRL
HHHHHCCHHHHHHHHCCCCCCCCEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHC
GQPFQGDLVNEPLRFGDTLLVAGAPDQLQEIVRTQQTAGDLVVVAFPRDMAITGHRLDWR
CCCCCCCCCCCCHHCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCH
SWTAMTIMILMLIVMAAGWLPVVTAALLAAVAMVLSGCVPLSGVYRRLNWESLVLIAAML
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHH
PMATALKKTGGAAFIAEQLVSVLGDFSPLVVLAGIFIVTSLLSQFISNTATAVLIMPIAL
HHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
GVADQLTLAPEPLLITAALAASTAFATPIASPVNTLVLAPGEYRFIDYVRAGVPLQLLVM
CCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCHHHHHH
VICLILVPVFFPW
HHHHHHHHHHCCC
>Mature Secondary Structure 
TFDIILVFSILLCVIVLFTTDRIRIDLVAVLGMLALMLGGILTPAEAVAGFGDTTVILI
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHH
AALMIVGDGLLQTGVAAWIGNKLGSIAGQSERRMLVTLMVPVAFLSAFISSTGTVAIMIP
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHH
VALSLARRAGISPARLLLPLAYAALTGGMLTLIGTPPNLIAAEALVSAGRPPLGFFSFTP
HHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCH
IGMTILVMITLTVAWFGHWLLPVRDVPVSEVERGPTLAELAADYFLTKDLVQVRVLADSP
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCC
LAGHTLSELRLQNRYGITVVGVRRWPGSRPEPGSPRAVTSATRILAGDLLDVIGDEGAIE
CCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH
RFCRQEGVVVQSLSSSLPFGPDLHIMEVALTPRSRFEGQTIARAELCQLFGVTVLGVRRL
HHHHHCCHHHHHHHHCCCCCCCCEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHC
GQPFQGDLVNEPLRFGDTLLVAGAPDQLQEIVRTQQTAGDLVVVAFPRDMAITGHRLDWR
CCCCCCCCCCCCHHCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCEEEECCCCCCH
SWTAMTIMILMLIVMAAGWLPVVTAALLAAVAMVLSGCVPLSGVYRRLNWESLVLIAAML
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHH
PMATALKKTGGAAFIAEQLVSVLGDFSPLVVLAGIFIVTSLLSQFISNTATAVLIMPIAL
HHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
GVADQLTLAPEPLLITAALAASTAFATPIASPVNTLVLAPGEYRFIDYVRAGVPLQLLVM
CCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCHHHHHH
VICLILVPVFFPW
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]