Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222526188

Identifier: 222526188

GI number: 222526188

Start: 3639248

End: 3641089

Strand: Direct

Name: 222526188

Synonym: Chy400_2947

Alternate gene names: NA

Gene position: 3639248-3641089 (Clockwise)

Preceding gene: 222526187

Following gene: 222526189

Centisome position: 69.07

GC content: 56.3

Gene sequence:

>1842_bases
ATGGATGAGATCGCACGCTTTTTACGCTCGTATCCACCCTTTGACCGCCTTCCCGAACAGGTTGTGCATCAAATCGCCGG
TGAATTGCAGATTGAGTTTGTGCGGGCAGGGCAGACCATTCTCACCAAAGGCGGTGAACCATCGTCGTTTCTGTACATCG
TGTGTAAGGGTTCTGTCGATCTGCTGCGTAGTGAAGATCAGGTCGTTGATACGCTTGGCCCCGGCGAGGCGTTTGGTCAT
CCTTCGTTGATCCGTGGCCAGCCACCGCTGGTCACCGTTCGTGCACATACTGATACGCTGCTCTATCTTCTGCCCGGTGC
GATCTTTCATCGCCTGCGAGCTGAACAACCACAGTTTGCCGCGTTCTTTGCTGCTTCGGTTATCGAGCGGCTCGGCTATG
CCCTGCAATCACGACAGTCGGAATCCAACCCTGCCCTGTTTCAAACCCGTTTACGCGATCTGGTGGCTCGTCCGCCGGTA
TCGATTAGCCCAGAGGCGACAGTTGGCGATGCAGCTCGTTTGATGCGTGACGAGCGGATTTCATCGTTGATTGTTGAACA
TACGCCTATCGGCATTATCACCGACCGTGATTTGCGCAACCGGGTATTGGCTGAAGGGCTGCCGGATACGACGCCGGTAC
GCCAGGTGATGAGTGCGCCGGCAACTACGATAGCGGCTGACGCGCTGGCGTTTGAGGGGTTATTGCTGATGCTTGAGCGA
GGTATCCATCACTTACCCCTTGTTGAAGGTGATCGGGTCGTAGGGGTCGTTACCCACACCGATATTTTGCGCCGCCAGAG
CAATAGCCCGCTCTTTTTACCGCGCCTGTTGCAACGGGCGACATCGCTGGCCGATTTACGTCGTTATACCGATCAGGTGG
CTGATGCAGTCTTCACGCTGACCGCTGCCGGAGCGCGGGTCAGTGATATTGGCCGGGTAGTGGCTGTGGCGCACGATGCT
CTATTACAACGCCTGATCCACGATGCCGAGGCGCAGCTTGGACCGCCACCGGTGCCGTATGCCTGGCTTGTGCTCGGTTC
CGAAGGACGTTACGAACAGACGTTACGCACCGATCAGGATAATGCGCTGGTGTACGATGACTCGGCTTCGGCAGACGATG
TCCGTTACTTTGAGCAACTGGCTACCCTGGTGGTTGATTGGCTGGTTGAATGTGGTTTCCCGCGCTGTCCAGGCAACATT
ATGGCGACCAATCCCGAATGGCGCCAGTCACTGGCTACCTGGCAACGCTATTTCCACCGCTGGATCGAGATTCCCGATGA
GGAGTCGTTGCTGCGTATTGCAATCTTTTTTGACTACCGGCAGGTATATGGTCAGTTGCCCGCCGAACCTGTTCTGCGCA
CAATAACTCAGCACGCTGCCGAACATCGCATCTTTATGGCTCGCCTGGCCCGCGCTGCGTTGCGACAGCCGGCGCCGTTG
ACCTTCTTTCGTCAGGTTGCGCTCGAACGACGTGGTGATCAACGCGATCTGCTCGATCTCAAGCTGCGCGGAACGGCGAT
GGTAGTTGATCTGGCACGTTTGTTTGCCCTTGAAGCCCACAGCAATGAAACGAACACCATTGCCCGCTTGCGGGCAGCCA
AAGCTGCCGGTGTGCTGAGCCACGAAGATGCCGATAACCTGATCAGCGCGTTTGAATTGCTCTCAAGTTTACGATTGCAC
CATCAGCAAAAGCAGATTGCGCTTGGTCTGCCACCGGATAACCTGGTCAATTTTCATCAACTGGGGCCGCGTGAACGGCG
TGAAGTCAAAGAGTCCTTGCAGGCGATTGCCTCTGTCCAACGTGGCGTAGCGCTGATGTTTCAAACTGACCGACTGGCGT
AG

Upstream 100 bases:

>100_bases
ACGGCAGTTAAGCTATTGTCACCTCTCGCGAATGATGATTGCCGGTCGATAACATCGGCTGTTGATACATTCGCCATTGT
TGTAGTTGCAGGGTTTCGCA

Downstream 100 bases:

>100_bases
AGGTGTCTATGGCGTTTTGGGCGAGACTGTTTCAACGCACGCCACCGGCTGATTTTGTACGGGCCTACGAAGCCTTTCCC
GAACCTGATCGGCGTTTACC

Product: putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase

Products: NA

Alternate protein names: OrfX [H]

Number of amino acids: Translated: 613; Mature: 613

Protein sequence:

>613_residues
MDEIARFLRSYPPFDRLPEQVVHQIAGELQIEFVRAGQTILTKGGEPSSFLYIVCKGSVDLLRSEDQVVDTLGPGEAFGH
PSLIRGQPPLVTVRAHTDTLLYLLPGAIFHRLRAEQPQFAAFFAASVIERLGYALQSRQSESNPALFQTRLRDLVARPPV
SISPEATVGDAARLMRDERISSLIVEHTPIGIITDRDLRNRVLAEGLPDTTPVRQVMSAPATTIAADALAFEGLLLMLER
GIHHLPLVEGDRVVGVVTHTDILRRQSNSPLFLPRLLQRATSLADLRRYTDQVADAVFTLTAAGARVSDIGRVVAVAHDA
LLQRLIHDAEAQLGPPPVPYAWLVLGSEGRYEQTLRTDQDNALVYDDSASADDVRYFEQLATLVVDWLVECGFPRCPGNI
MATNPEWRQSLATWQRYFHRWIEIPDEESLLRIAIFFDYRQVYGQLPAEPVLRTITQHAAEHRIFMARLARAALRQPAPL
TFFRQVALERRGDQRDLLDLKLRGTAMVVDLARLFALEAHSNETNTIARLRAAKAAGVLSHEDADNLISAFELLSSLRLH
HQQKQIALGLPPDNLVNFHQLGPRERREVKESLQAIASVQRGVALMFQTDRLA

Sequences:

>Translated_613_residues
MDEIARFLRSYPPFDRLPEQVVHQIAGELQIEFVRAGQTILTKGGEPSSFLYIVCKGSVDLLRSEDQVVDTLGPGEAFGH
PSLIRGQPPLVTVRAHTDTLLYLLPGAIFHRLRAEQPQFAAFFAASVIERLGYALQSRQSESNPALFQTRLRDLVARPPV
SISPEATVGDAARLMRDERISSLIVEHTPIGIITDRDLRNRVLAEGLPDTTPVRQVMSAPATTIAADALAFEGLLLMLER
GIHHLPLVEGDRVVGVVTHTDILRRQSNSPLFLPRLLQRATSLADLRRYTDQVADAVFTLTAAGARVSDIGRVVAVAHDA
LLQRLIHDAEAQLGPPPVPYAWLVLGSEGRYEQTLRTDQDNALVYDDSASADDVRYFEQLATLVVDWLVECGFPRCPGNI
MATNPEWRQSLATWQRYFHRWIEIPDEESLLRIAIFFDYRQVYGQLPAEPVLRTITQHAAEHRIFMARLARAALRQPAPL
TFFRQVALERRGDQRDLLDLKLRGTAMVVDLARLFALEAHSNETNTIARLRAAKAAGVLSHEDADNLISAFELLSSLRLH
HQQKQIALGLPPDNLVNFHQLGPRERREVKESLQAIASVQRGVALMFQTDRLA
>Mature_613_residues
MDEIARFLRSYPPFDRLPEQVVHQIAGELQIEFVRAGQTILTKGGEPSSFLYIVCKGSVDLLRSEDQVVDTLGPGEAFGH
PSLIRGQPPLVTVRAHTDTLLYLLPGAIFHRLRAEQPQFAAFFAASVIERLGYALQSRQSESNPALFQTRLRDLVARPPV
SISPEATVGDAARLMRDERISSLIVEHTPIGIITDRDLRNRVLAEGLPDTTPVRQVMSAPATTIAADALAFEGLLLMLER
GIHHLPLVEGDRVVGVVTHTDILRRQSNSPLFLPRLLQRATSLADLRRYTDQVADAVFTLTAAGARVSDIGRVVAVAHDA
LLQRLIHDAEAQLGPPPVPYAWLVLGSEGRYEQTLRTDQDNALVYDDSASADDVRYFEQLATLVVDWLVECGFPRCPGNI
MATNPEWRQSLATWQRYFHRWIEIPDEESLLRIAIFFDYRQVYGQLPAEPVLRTITQHAAEHRIFMARLARAALRQPAPL
TFFRQVALERRGDQRDLLDLKLRGTAMVVDLARLFALEAHSNETNTIARLRAAKAAGVLSHEDADNLISAFELLSSLRLH
HQQKQIALGLPPDNLVNFHQLGPRERREVKESLQAIASVQRGVALMFQTDRLA

Specific function: Unknown

COG id: COG2905

COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 68499; Mature: 68499

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEIARFLRSYPPFDRLPEQVVHQIAGELQIEFVRAGQTILTKGGEPSSFLYIVCKGSVD
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEEEEECCCCEEECCCCCCCEEEEEECCCHH
LLRSEDQVVDTLGPGEAFGHPSLIRGQPPLVTVRAHTDTLLYLLPGAIFHRLRAEQPQFA
HHCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHH
AFFAASVIERLGYALQSRQSESNPALFQTRLRDLVARPPVSISPEATVGDAARLMRDERI
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
SSLIVEHTPIGIITDRDLRNRVLAEGLPDTTPVRQVMSAPATTIAADALAFEGLLLMLER
HHHHHHCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
GIHHLPLVEGDRVVGVVTHTDILRRQSNSPLFLPRLLQRATSLADLRRYTDQVADAVFTL
CCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAAGARVSDIGRVVAVAHDALLQRLIHDAEAQLGPPPVPYAWLVLGSEGRYEQTLRTDQD
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHCCCCC
NALVYDDSASADDVRYFEQLATLVVDWLVECGFPRCPGNIMATNPEWRQSLATWQRYFHR
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHH
WIEIPDEESLLRIAIFFDYRQVYGQLPAEPVLRTITQHAAEHRIFMARLARAALRQPAPL
HCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TFFRQVALERRGDQRDLLDLKLRGTAMVVDLARLFALEAHSNETNTIARLRAAKAAGVLS
HHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
HEDADNLISAFELLSSLRLHHQQKQIALGLPPDNLVNFHQLGPRERREVKESLQAIASVQ
CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHCCCHHHCCCHHHHHHHHHHHHHHHHH
RGVALMFQTDRLA
HCEEEEEECCCCC
>Mature Secondary Structure
MDEIARFLRSYPPFDRLPEQVVHQIAGELQIEFVRAGQTILTKGGEPSSFLYIVCKGSVD
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEEEEECCCCEEECCCCCCCEEEEEECCCHH
LLRSEDQVVDTLGPGEAFGHPSLIRGQPPLVTVRAHTDTLLYLLPGAIFHRLRAEQPQFA
HHCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHH
AFFAASVIERLGYALQSRQSESNPALFQTRLRDLVARPPVSISPEATVGDAARLMRDERI
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
SSLIVEHTPIGIITDRDLRNRVLAEGLPDTTPVRQVMSAPATTIAADALAFEGLLLMLER
HHHHHHCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
GIHHLPLVEGDRVVGVVTHTDILRRQSNSPLFLPRLLQRATSLADLRRYTDQVADAVFTL
CCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAAGARVSDIGRVVAVAHDALLQRLIHDAEAQLGPPPVPYAWLVLGSEGRYEQTLRTDQD
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHCCCCC
NALVYDDSASADDVRYFEQLATLVVDWLVECGFPRCPGNIMATNPEWRQSLATWQRYFHR
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHH
WIEIPDEESLLRIAIFFDYRQVYGQLPAEPVLRTITQHAAEHRIFMARLARAALRQPAPL
HCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TFFRQVALERRGDQRDLLDLKLRGTAMVVDLARLFALEAHSNETNTIARLRAAKAAGVLS
HHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
HEDADNLISAFELLSSLRLHHQQKQIALGLPPDNLVNFHQLGPRERREVKESLQAIASVQ
CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHCCCHHHCCCHHHHHHHHHHHHHHHHH
RGVALMFQTDRLA
HCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11930014; 8522533 [H]