| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526188
Identifier: 222526188
GI number: 222526188
Start: 3639248
End: 3641089
Strand: Direct
Name: 222526188
Synonym: Chy400_2947
Alternate gene names: NA
Gene position: 3639248-3641089 (Clockwise)
Preceding gene: 222526187
Following gene: 222526189
Centisome position: 69.07
GC content: 56.3
Gene sequence:
>1842_bases ATGGATGAGATCGCACGCTTTTTACGCTCGTATCCACCCTTTGACCGCCTTCCCGAACAGGTTGTGCATCAAATCGCCGG TGAATTGCAGATTGAGTTTGTGCGGGCAGGGCAGACCATTCTCACCAAAGGCGGTGAACCATCGTCGTTTCTGTACATCG TGTGTAAGGGTTCTGTCGATCTGCTGCGTAGTGAAGATCAGGTCGTTGATACGCTTGGCCCCGGCGAGGCGTTTGGTCAT CCTTCGTTGATCCGTGGCCAGCCACCGCTGGTCACCGTTCGTGCACATACTGATACGCTGCTCTATCTTCTGCCCGGTGC GATCTTTCATCGCCTGCGAGCTGAACAACCACAGTTTGCCGCGTTCTTTGCTGCTTCGGTTATCGAGCGGCTCGGCTATG CCCTGCAATCACGACAGTCGGAATCCAACCCTGCCCTGTTTCAAACCCGTTTACGCGATCTGGTGGCTCGTCCGCCGGTA TCGATTAGCCCAGAGGCGACAGTTGGCGATGCAGCTCGTTTGATGCGTGACGAGCGGATTTCATCGTTGATTGTTGAACA TACGCCTATCGGCATTATCACCGACCGTGATTTGCGCAACCGGGTATTGGCTGAAGGGCTGCCGGATACGACGCCGGTAC GCCAGGTGATGAGTGCGCCGGCAACTACGATAGCGGCTGACGCGCTGGCGTTTGAGGGGTTATTGCTGATGCTTGAGCGA GGTATCCATCACTTACCCCTTGTTGAAGGTGATCGGGTCGTAGGGGTCGTTACCCACACCGATATTTTGCGCCGCCAGAG CAATAGCCCGCTCTTTTTACCGCGCCTGTTGCAACGGGCGACATCGCTGGCCGATTTACGTCGTTATACCGATCAGGTGG CTGATGCAGTCTTCACGCTGACCGCTGCCGGAGCGCGGGTCAGTGATATTGGCCGGGTAGTGGCTGTGGCGCACGATGCT CTATTACAACGCCTGATCCACGATGCCGAGGCGCAGCTTGGACCGCCACCGGTGCCGTATGCCTGGCTTGTGCTCGGTTC CGAAGGACGTTACGAACAGACGTTACGCACCGATCAGGATAATGCGCTGGTGTACGATGACTCGGCTTCGGCAGACGATG TCCGTTACTTTGAGCAACTGGCTACCCTGGTGGTTGATTGGCTGGTTGAATGTGGTTTCCCGCGCTGTCCAGGCAACATT ATGGCGACCAATCCCGAATGGCGCCAGTCACTGGCTACCTGGCAACGCTATTTCCACCGCTGGATCGAGATTCCCGATGA GGAGTCGTTGCTGCGTATTGCAATCTTTTTTGACTACCGGCAGGTATATGGTCAGTTGCCCGCCGAACCTGTTCTGCGCA CAATAACTCAGCACGCTGCCGAACATCGCATCTTTATGGCTCGCCTGGCCCGCGCTGCGTTGCGACAGCCGGCGCCGTTG ACCTTCTTTCGTCAGGTTGCGCTCGAACGACGTGGTGATCAACGCGATCTGCTCGATCTCAAGCTGCGCGGAACGGCGAT GGTAGTTGATCTGGCACGTTTGTTTGCCCTTGAAGCCCACAGCAATGAAACGAACACCATTGCCCGCTTGCGGGCAGCCA AAGCTGCCGGTGTGCTGAGCCACGAAGATGCCGATAACCTGATCAGCGCGTTTGAATTGCTCTCAAGTTTACGATTGCAC CATCAGCAAAAGCAGATTGCGCTTGGTCTGCCACCGGATAACCTGGTCAATTTTCATCAACTGGGGCCGCGTGAACGGCG TGAAGTCAAAGAGTCCTTGCAGGCGATTGCCTCTGTCCAACGTGGCGTAGCGCTGATGTTTCAAACTGACCGACTGGCGT AG
Upstream 100 bases:
>100_bases ACGGCAGTTAAGCTATTGTCACCTCTCGCGAATGATGATTGCCGGTCGATAACATCGGCTGTTGATACATTCGCCATTGT TGTAGTTGCAGGGTTTCGCA
Downstream 100 bases:
>100_bases AGGTGTCTATGGCGTTTTGGGCGAGACTGTTTCAACGCACGCCACCGGCTGATTTTGTACGGGCCTACGAAGCCTTTCCC GAACCTGATCGGCGTTTACC
Product: putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
Products: NA
Alternate protein names: OrfX [H]
Number of amino acids: Translated: 613; Mature: 613
Protein sequence:
>613_residues MDEIARFLRSYPPFDRLPEQVVHQIAGELQIEFVRAGQTILTKGGEPSSFLYIVCKGSVDLLRSEDQVVDTLGPGEAFGH PSLIRGQPPLVTVRAHTDTLLYLLPGAIFHRLRAEQPQFAAFFAASVIERLGYALQSRQSESNPALFQTRLRDLVARPPV SISPEATVGDAARLMRDERISSLIVEHTPIGIITDRDLRNRVLAEGLPDTTPVRQVMSAPATTIAADALAFEGLLLMLER GIHHLPLVEGDRVVGVVTHTDILRRQSNSPLFLPRLLQRATSLADLRRYTDQVADAVFTLTAAGARVSDIGRVVAVAHDA LLQRLIHDAEAQLGPPPVPYAWLVLGSEGRYEQTLRTDQDNALVYDDSASADDVRYFEQLATLVVDWLVECGFPRCPGNI MATNPEWRQSLATWQRYFHRWIEIPDEESLLRIAIFFDYRQVYGQLPAEPVLRTITQHAAEHRIFMARLARAALRQPAPL TFFRQVALERRGDQRDLLDLKLRGTAMVVDLARLFALEAHSNETNTIARLRAAKAAGVLSHEDADNLISAFELLSSLRLH HQQKQIALGLPPDNLVNFHQLGPRERREVKESLQAIASVQRGVALMFQTDRLA
Sequences:
>Translated_613_residues MDEIARFLRSYPPFDRLPEQVVHQIAGELQIEFVRAGQTILTKGGEPSSFLYIVCKGSVDLLRSEDQVVDTLGPGEAFGH PSLIRGQPPLVTVRAHTDTLLYLLPGAIFHRLRAEQPQFAAFFAASVIERLGYALQSRQSESNPALFQTRLRDLVARPPV SISPEATVGDAARLMRDERISSLIVEHTPIGIITDRDLRNRVLAEGLPDTTPVRQVMSAPATTIAADALAFEGLLLMLER GIHHLPLVEGDRVVGVVTHTDILRRQSNSPLFLPRLLQRATSLADLRRYTDQVADAVFTLTAAGARVSDIGRVVAVAHDA LLQRLIHDAEAQLGPPPVPYAWLVLGSEGRYEQTLRTDQDNALVYDDSASADDVRYFEQLATLVVDWLVECGFPRCPGNI MATNPEWRQSLATWQRYFHRWIEIPDEESLLRIAIFFDYRQVYGQLPAEPVLRTITQHAAEHRIFMARLARAALRQPAPL TFFRQVALERRGDQRDLLDLKLRGTAMVVDLARLFALEAHSNETNTIARLRAAKAAGVLSHEDADNLISAFELLSSLRLH HQQKQIALGLPPDNLVNFHQLGPRERREVKESLQAIASVQRGVALMFQTDRLA >Mature_613_residues MDEIARFLRSYPPFDRLPEQVVHQIAGELQIEFVRAGQTILTKGGEPSSFLYIVCKGSVDLLRSEDQVVDTLGPGEAFGH PSLIRGQPPLVTVRAHTDTLLYLLPGAIFHRLRAEQPQFAAFFAASVIERLGYALQSRQSESNPALFQTRLRDLVARPPV SISPEATVGDAARLMRDERISSLIVEHTPIGIITDRDLRNRVLAEGLPDTTPVRQVMSAPATTIAADALAFEGLLLMLER GIHHLPLVEGDRVVGVVTHTDILRRQSNSPLFLPRLLQRATSLADLRRYTDQVADAVFTLTAAGARVSDIGRVVAVAHDA LLQRLIHDAEAQLGPPPVPYAWLVLGSEGRYEQTLRTDQDNALVYDDSASADDVRYFEQLATLVVDWLVECGFPRCPGNI MATNPEWRQSLATWQRYFHRWIEIPDEESLLRIAIFFDYRQVYGQLPAEPVLRTITQHAAEHRIFMARLARAALRQPAPL TFFRQVALERRGDQRDLLDLKLRGTAMVVDLARLFALEAHSNETNTIARLRAAKAAGVLSHEDADNLISAFELLSSLRLH HQQKQIALGLPPDNLVNFHQLGPRERREVKESLQAIASVQRGVALMFQTDRLA
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 68499; Mature: 68499
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEIARFLRSYPPFDRLPEQVVHQIAGELQIEFVRAGQTILTKGGEPSSFLYIVCKGSVD CHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEEEEECCCCEEECCCCCCCEEEEEECCCHH LLRSEDQVVDTLGPGEAFGHPSLIRGQPPLVTVRAHTDTLLYLLPGAIFHRLRAEQPQFA HHCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHH AFFAASVIERLGYALQSRQSESNPALFQTRLRDLVARPPVSISPEATVGDAARLMRDERI HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH SSLIVEHTPIGIITDRDLRNRVLAEGLPDTTPVRQVMSAPATTIAADALAFEGLLLMLER HHHHHHCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC GIHHLPLVEGDRVVGVVTHTDILRRQSNSPLFLPRLLQRATSLADLRRYTDQVADAVFTL CCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAAGARVSDIGRVVAVAHDALLQRLIHDAEAQLGPPPVPYAWLVLGSEGRYEQTLRTDQD HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHCCCCC NALVYDDSASADDVRYFEQLATLVVDWLVECGFPRCPGNIMATNPEWRQSLATWQRYFHR CEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHH WIEIPDEESLLRIAIFFDYRQVYGQLPAEPVLRTITQHAAEHRIFMARLARAALRQPAPL HCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH TFFRQVALERRGDQRDLLDLKLRGTAMVVDLARLFALEAHSNETNTIARLRAAKAAGVLS HHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC HEDADNLISAFELLSSLRLHHQQKQIALGLPPDNLVNFHQLGPRERREVKESLQAIASVQ CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHCCCHHHCCCHHHHHHHHHHHHHHHHH RGVALMFQTDRLA HCEEEEEECCCCC >Mature Secondary Structure MDEIARFLRSYPPFDRLPEQVVHQIAGELQIEFVRAGQTILTKGGEPSSFLYIVCKGSVD CHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEEEEECCCCEEECCCCCCCEEEEEECCCHH LLRSEDQVVDTLGPGEAFGHPSLIRGQPPLVTVRAHTDTLLYLLPGAIFHRLRAEQPQFA HHCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHH AFFAASVIERLGYALQSRQSESNPALFQTRLRDLVARPPVSISPEATVGDAARLMRDERI HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH SSLIVEHTPIGIITDRDLRNRVLAEGLPDTTPVRQVMSAPATTIAADALAFEGLLLMLER HHHHHHCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC GIHHLPLVEGDRVVGVVTHTDILRRQSNSPLFLPRLLQRATSLADLRRYTDQVADAVFTL CCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAAGARVSDIGRVVAVAHDALLQRLIHDAEAQLGPPPVPYAWLVLGSEGRYEQTLRTDQD HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHCCCCC NALVYDDSASADDVRYFEQLATLVVDWLVECGFPRCPGNIMATNPEWRQSLATWQRYFHR CEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHH WIEIPDEESLLRIAIFFDYRQVYGQLPAEPVLRTITQHAAEHRIFMARLARAALRQPAPL HCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH TFFRQVALERRGDQRDLLDLKLRGTAMVVDLARLFALEAHSNETNTIARLRAAKAAGVLS HHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC HEDADNLISAFELLSSLRLHHQQKQIALGLPPDNLVNFHQLGPRERREVKESLQAIASVQ CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHCCCHHHCCCHHHHHHHHHHHHHHHHH RGVALMFQTDRLA HCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11930014; 8522533 [H]