| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526172
Identifier: 222526172
GI number: 222526172
Start: 3626451
End: 3627185
Strand: Reverse
Name: 222526172
Synonym: Chy400_2931
Alternate gene names: NA
Gene position: 3627185-3626451 (Counterclockwise)
Preceding gene: 222526173
Following gene: 222526171
Centisome position: 68.84
GC content: 53.74
Gene sequence:
>735_bases ATGAACCGTCTCTTACACACAACCTATTGGGATATTGTTCGCCAGTATCGCAACGGATTTTACTTCGTTACGGTGTTGAT CGTCGCGCTCCTGGTTGTTTTGTTACGTCAACTCGATGGCGTGGACTGGCAACTGTGGTGGCCGGCCATTCTGCTGGAAA CGCTGGTGGTTAACAGCTTTTTCTTTATGGCCGGGCTGGTCTTGCTGGAGAAGGGGGAAGGCGTGCTGGAAGCACAGGTT GTCACCCCGCTCCGCGACTGGGAGTATCTGCTGGCGAAGATTATCAGTCTATTCGTCCTTTCAGCCAGCGAGTCGCTGGC CCTGATCCTGCTGGTGAGCGGCCCAGCCTTTAACTGGTTGTGGATGCTAATCGGCATCGGTTGTTTTGTCGCCATGTACA CGTTATACGGATTTTTTGTTGTGGCGCGTTACGATTCGATCTCTGAATTCATCCTGCCTTCGGCGCTATGGACGATGGGT TTTTCGATTCCGCTGTTACCCTATTTTGATCTCTGGCAACACTGGCTGATCTACCTGCATCCACTTCAGGCACCCCTGAT ACTGGTGGAGGCAGCCTACAAGCCGCTACCGGCCTGGCAGTTGTGGTACGGTATTCTTTACAGTCTGGTCTGGATCAGTA TCGGATGGGTCGTCGGGCGGCACACCTTCTACCGCTTCGTGGTGACCAAAGAGGGCAGTCGGCGGCGAAGCGTATCGTTA GCGAGGTCGTTATGA
Upstream 100 bases:
>100_bases CCGGTTCTACGCTGCCACGCTCAGGGGTGGCAGGTTGATCGCTGGATCACGGGTCATAAACGTTATAACACCGGATTAGA TATTACACTGCGAGAACGCT
Downstream 100 bases:
>100_bases ATATGTTGCAAACACTCCGTGCTCTTGGCCCAATCGATCTGCGCAGTGTCTGGCGCGATAAGATGCTCTCGTGGATGATC TTCCTGCCGATCCTGGGAGC
Product: ABC-2 type transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MNRLLHTTYWDIVRQYRNGFYFVTVLIVALLVVLLRQLDGVDWQLWWPAILLETLVVNSFFFMAGLVLLEKGEGVLEAQV VTPLRDWEYLLAKIISLFVLSASESLALILLVSGPAFNWLWMLIGIGCFVAMYTLYGFFVVARYDSISEFILPSALWTMG FSIPLLPYFDLWQHWLIYLHPLQAPLILVEAAYKPLPAWQLWYGILYSLVWISIGWVVGRHTFYRFVVTKEGSRRRSVSL ARSL
Sequences:
>Translated_244_residues MNRLLHTTYWDIVRQYRNGFYFVTVLIVALLVVLLRQLDGVDWQLWWPAILLETLVVNSFFFMAGLVLLEKGEGVLEAQV VTPLRDWEYLLAKIISLFVLSASESLALILLVSGPAFNWLWMLIGIGCFVAMYTLYGFFVVARYDSISEFILPSALWTMG FSIPLLPYFDLWQHWLIYLHPLQAPLILVEAAYKPLPAWQLWYGILYSLVWISIGWVVGRHTFYRFVVTKEGSRRRSVSL ARSL >Mature_244_residues MNRLLHTTYWDIVRQYRNGFYFVTVLIVALLVVLLRQLDGVDWQLWWPAILLETLVVNSFFFMAGLVLLEKGEGVLEAQV VTPLRDWEYLLAKIISLFVLSASESLALILLVSGPAFNWLWMLIGIGCFVAMYTLYGFFVVARYDSISEFILPSALWTMG FSIPLLPYFDLWQHWLIYLHPLQAPLILVEAAYKPLPAWQLWYGILYSLVWISIGWVVGRHTFYRFVVTKEGSRRRSVSL ARSL
Specific function: Part of the ABC transporter complex Rv2686c/Rv2687c/Rv2688c involved in fluoroquinolones export. Confers resistance to ciprofloxacin and, to a lesser extent, norfloxacin, moxifloxacin and sparfloxacin. Probably responsible for the translocation of the sub
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28333; Mature: 28333
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLLHTTYWDIVRQYRNGFYFVTVLIVALLVVLLRQLDGVDWQLWWPAILLETLVVNSF CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH FFMAGLVLLEKGEGVLEAQVVTPLRDWEYLLAKIISLFVLSASESLALILLVSGPAFNWL HHHHHHHHHHCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHH WMLIGIGCFVAMYTLYGFFVVARYDSISEFILPSALWTMGFSIPLLPYFDLWQHWLIYLH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH PLQAPLILVEAAYKPLPAWQLWYGILYSLVWISIGWVVGRHTFYRFVVTKEGSRRRSVSL HHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHH ARSL HHCC >Mature Secondary Structure MNRLLHTTYWDIVRQYRNGFYFVTVLIVALLVVLLRQLDGVDWQLWWPAILLETLVVNSF CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH FFMAGLVLLEKGEGVLEAQVVTPLRDWEYLLAKIISLFVLSASESLALILLVSGPAFNWL HHHHHHHHHHCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHH WMLIGIGCFVAMYTLYGFFVVARYDSISEFILPSALWTMGFSIPLLPYFDLWQHWLIYLH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH PLQAPLILVEAAYKPLPAWQLWYGILYSLVWISIGWVVGRHTFYRFVVTKEGSRRRSVSL HHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHH ARSL HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]