Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222526169

Identifier: 222526169

GI number: 222526169

Start: 3622408

End: 3624366

Strand: Reverse

Name: 222526169

Synonym: Chy400_2928

Alternate gene names: NA

Gene position: 3624366-3622408 (Counterclockwise)

Preceding gene: 222526170

Following gene: 222526168

Centisome position: 68.79

GC content: 60.34

Gene sequence:

>1959_bases
ATGTACGACCAAAAGCGACCAGATGTCGCGGTCTTCATCGACTTCGAGAACATTTATGTCAGCGTGCGCGACAAGCTCAA
CGCCACGCCTAATTTCGAAGCGATTATGGACCGCTGCAACGACCTCGGCCGCGTCGTGATTTCACGCGCCTACGCCGACT
GGTACCGTTATCCTCGCATTACCAGTGCCCTTTACGCCAACGCTATTGAACCAATTTACGTTGCCACGTACTACTACGAC
AAAGATGCCGGTCGTACCGGACGAGCAATCAAAAACAGTGTCGATATGAACCTTTGTATCGACGCGATGAAGACGCTCTA
TACCAACCCGAACGTTGCCCGCTTCGTTCTGGTCACCGGCGACCGTGACTTTATTCCGCTGGTACACAGTATTCGCCAGC
ACGGCAAAGAGGTGTACATCATCGGTATCGGCGGTGCTGCCAGTACCCATCTGGCTCAAAGCGCCGACGAGTTTGTCTTC
TACGAGCAACTGATCGGGCGTCAACCGAGTGCCAGTGCCGCCGCCACGGCAATTGCCAATCGGGCAACCGAGCTTAACCG
CGCCCTCGAAATGGTCGAAGCCGAGCCGCCACCGACCCCGGTCGTTGCCCCACCCCCGCCCGAACCGGACATTTACGATG
TGCTGGTGCAGGCTATTCACCTGGCCCGCAAGCGCGGCTATGTGACCACGCTGGGATCGCTGAAGATGCTGATGAAAGAG
CTGATGGGTGGCGATTTCAAAGAGAATCGCTACCGTGACCTGAACGGACGGCCATTCTCCAAGTTTAAGGACCTGGTGAT
GGACGCCGAACAGCGCGGGAAGGTGCAAATCTTCACCAAAGGCTCGGTCAACGAGGTCTTCCTGCCCGGCGAAGACCCGA
TGAAGCTTTCGCGCTTTGCCCCGGCGCTGATGGAAGAGTTGCCGCCCGAACCGGTGGTGATCGATCCGCCCATCGGGAGT
AACGGCAGTGTCCAGATCGCCGAGATCAGCCCGGTCGTGGTCGAAGAGTTGAAGACGGTTGTGCCAGAACCGGCACCGAC
CACCACAACCACCAGCAGTCGCCGCCGCCGCCGGCGGTCGCGGCGCAGTGGTCGCCAGCGCGAAGAGCATACCGTCATTC
AGGAAACGACCGAGGTTGTTGTCGAACTGGACGAGCCTGAGTACAATCCGCCTCAGATCGATGAACCGACCCCGATCAGC
GCGGAGACACCTGTCGCAGTCGAACTCGTGGCAGAGCCACTGCCTGTTCCAGCCGAACCAGTGGTGGAAGCGTTACCGGC
CACGGTTGAGGCCGCCCAGGGTGCAGCCGAGAGCGAACAACCGGCCAAGCCGAGTCGCAATCGGCGCCGGCGGTCGCGGA
AGGCAACCGCCGAGGCTGGCGAAGCGGCTACCGGCGCATCCGAGTCAACCGACGAGGCGGGGTTGACGGTTGCCCCGGCA
GTCGTGGAGCCATCGGCGCCACTGCCCGAACCGGCAGGCGATCTAGCGATGACGGCGCCAGCGGTGACCACCGGCGCGTC
GGAGTCAACCGCCGAGGCGGAGGTGATGGTTGCTCCGGCGGTTGAGGAGCCATCGGCGCCACTGCCCGAATCGGCAGGCG
ATCCTGCGATGACAGCGCCAGCAGCAGTGTCGGGTAACGAAGCGACGATGGCATCCACCGCTGAAGTGGAGTCATCTGCG
GGGGCGTCAACAGCCGAGGACGGTATCGGTCAGGTTGATCTCAGCGTCGTATTTAGCGAAGCTGAATGGGAACTCTTACG
AGCGACTGTCCGTGAATTGGGCAAACCGGCCACCTTCCAACAACTCTTGAGTGCGCTTCAGGCTGCACGTAAACAACACG
GGTTGCCGCGTACTACCGAAGAGAATCGCACAATGCTCAAGCAAGCCATTCACCATGGCATGTTTGAGCGCACGACTCGG
AGCCGTCGCGTTTATTACACCCTGAAGACGAGTGAGTAG

Upstream 100 bases:

>100_bases
CGGTAGTGATACAACAACCCGGTACGATAGCGTGAGCTGGCGTCGATGAATGCTCCGCGCTCCACCCTCCCAATGCACAA
CAGGAGCAGACAAGACAACG

Downstream 100 bases:

>100_bases
CCTGATCAAAATCTGTGGCCTACGCACAGTCGATCTGGCGCTGGCAGCCGCCACTGCCGGCGCCGATCTGATCGGCCTGG
TCTTTGCGCCCAGCCGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 652; Mature: 652

Protein sequence:

>652_residues
MYDQKRPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAYADWYRYPRITSALYANAIEPIYVATYYYD
KDAGRTGRAIKNSVDMNLCIDAMKTLYTNPNVARFVLVTGDRDFIPLVHSIRQHGKEVYIIGIGGAASTHLAQSADEFVF
YEQLIGRQPSASAAATAIANRATELNRALEMVEAEPPPTPVVAPPPPEPDIYDVLVQAIHLARKRGYVTTLGSLKMLMKE
LMGGDFKENRYRDLNGRPFSKFKDLVMDAEQRGKVQIFTKGSVNEVFLPGEDPMKLSRFAPALMEELPPEPVVIDPPIGS
NGSVQIAEISPVVVEELKTVVPEPAPTTTTTSSRRRRRRSRRSGRQREEHTVIQETTEVVVELDEPEYNPPQIDEPTPIS
AETPVAVELVAEPLPVPAEPVVEALPATVEAAQGAAESEQPAKPSRNRRRRSRKATAEAGEAATGASESTDEAGLTVAPA
VVEPSAPLPEPAGDLAMTAPAVTTGASESTAEAEVMVAPAVEEPSAPLPESAGDPAMTAPAAVSGNEATMASTAEVESSA
GASTAEDGIGQVDLSVVFSEAEWELLRATVRELGKPATFQQLLSALQAARKQHGLPRTTEENRTMLKQAIHHGMFERTTR
SRRVYYTLKTSE

Sequences:

>Translated_652_residues
MYDQKRPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAYADWYRYPRITSALYANAIEPIYVATYYYD
KDAGRTGRAIKNSVDMNLCIDAMKTLYTNPNVARFVLVTGDRDFIPLVHSIRQHGKEVYIIGIGGAASTHLAQSADEFVF
YEQLIGRQPSASAAATAIANRATELNRALEMVEAEPPPTPVVAPPPPEPDIYDVLVQAIHLARKRGYVTTLGSLKMLMKE
LMGGDFKENRYRDLNGRPFSKFKDLVMDAEQRGKVQIFTKGSVNEVFLPGEDPMKLSRFAPALMEELPPEPVVIDPPIGS
NGSVQIAEISPVVVEELKTVVPEPAPTTTTTSSRRRRRRSRRSGRQREEHTVIQETTEVVVELDEPEYNPPQIDEPTPIS
AETPVAVELVAEPLPVPAEPVVEALPATVEAAQGAAESEQPAKPSRNRRRRSRKATAEAGEAATGASESTDEAGLTVAPA
VVEPSAPLPEPAGDLAMTAPAVTTGASESTAEAEVMVAPAVEEPSAPLPESAGDPAMTAPAAVSGNEATMASTAEVESSA
GASTAEDGIGQVDLSVVFSEAEWELLRATVRELGKPATFQQLLSALQAARKQHGLPRTTEENRTMLKQAIHHGMFERTTR
SRRVYYTLKTSE
>Mature_652_residues
MYDQKRPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAYADWYRYPRITSALYANAIEPIYVATYYYD
KDAGRTGRAIKNSVDMNLCIDAMKTLYTNPNVARFVLVTGDRDFIPLVHSIRQHGKEVYIIGIGGAASTHLAQSADEFVF
YEQLIGRQPSASAAATAIANRATELNRALEMVEAEPPPTPVVAPPPPEPDIYDVLVQAIHLARKRGYVTTLGSLKMLMKE
LMGGDFKENRYRDLNGRPFSKFKDLVMDAEQRGKVQIFTKGSVNEVFLPGEDPMKLSRFAPALMEELPPEPVVIDPPIGS
NGSVQIAEISPVVVEELKTVVPEPAPTTTTTSSRRRRRRSRRSGRQREEHTVIQETTEVVVELDEPEYNPPQIDEPTPIS
AETPVAVELVAEPLPVPAEPVVEALPATVEAAQGAAESEQPAKPSRNRRRRSRKATAEAGEAATGASESTDEAGLTVAPA
VVEPSAPLPEPAGDLAMTAPAVTTGASESTAEAEVMVAPAVEEPSAPLPESAGDPAMTAPAAVSGNEATMASTAEVESSA
GASTAEDGIGQVDLSVVFSEAEWELLRATVRELGKPATFQQLLSALQAARKQHGLPRTTEENRTMLKQAIHHGMFERTTR
SRRVYYTLKTSE

Specific function: Unknown

COG id: COG1432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70915; Mature: 70915

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDQKRPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAYADWYRYPRI
CCCCCCCCEEEEEEECCEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
TSALYANAIEPIYVATYYYDKDAGRTGRAIKNSVDMNLCIDAMKTLYTNPNVARFVLVTG
HHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEEC
DRDFIPLVHSIRQHGKEVYIIGIGGAASTHLAQSADEFVFYEQLIGRQPSASAAATAIAN
CCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RATELNRALEMVEAEPPPTPVVAPPPPEPDIYDVLVQAIHLARKRGYVTTLGSLKMLMKE
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHH
LMGGDFKENRYRDLNGRPFSKFKDLVMDAEQRGKVQIFTKGSVNEVFLPGEDPMKLSRFA
HHCCCCCCCCCCCCCCCCHHHHHHHHHCHHHCCCEEEEECCCCCEEEECCCCCHHHHHHH
PALMEELPPEPVVIDPPIGSNGSVQIAEISPVVVEELKTVVPEPAPTTTTTSSRRRRRRS
HHHHHHCCCCCEEECCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
RRSGRQREEHTVIQETTEVVVELDEPEYNPPQIDEPTPISAETPVAVELVAEPLPVPAEP
HHCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHH
VVEALPATVEAAQGAAESEQPAKPSRNRRRRSRKATAEAGEAATGASESTDEAGLTVAPA
HHHHHCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECC
VVEPSAPLPEPAGDLAMTAPAVTTGASESTAEAEVMVAPAVEEPSAPLPESAGDPAMTAP
EECCCCCCCCCCCCCEECCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
AAVSGNEATMASTAEVESSAGASTAEDGIGQVDLSVVFSEAEWELLRATVRELGKPATFQ
CCCCCCCCCEEHHHHHHHCCCCCCHHCCCCEEEEEEEECHHHHHHHHHHHHHHCCCHHHH
QLLSALQAARKQHGLPRTTEENRTMLKQAIHHGMFERTTRSRRVYYTLKTSE
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
>Mature Secondary Structure
MYDQKRPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAYADWYRYPRI
CCCCCCCCEEEEEEECCEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
TSALYANAIEPIYVATYYYDKDAGRTGRAIKNSVDMNLCIDAMKTLYTNPNVARFVLVTG
HHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEEC
DRDFIPLVHSIRQHGKEVYIIGIGGAASTHLAQSADEFVFYEQLIGRQPSASAAATAIAN
CCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RATELNRALEMVEAEPPPTPVVAPPPPEPDIYDVLVQAIHLARKRGYVTTLGSLKMLMKE
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHH
LMGGDFKENRYRDLNGRPFSKFKDLVMDAEQRGKVQIFTKGSVNEVFLPGEDPMKLSRFA
HHCCCCCCCCCCCCCCCCHHHHHHHHHCHHHCCCEEEEECCCCCEEEECCCCCHHHHHHH
PALMEELPPEPVVIDPPIGSNGSVQIAEISPVVVEELKTVVPEPAPTTTTTSSRRRRRRS
HHHHHHCCCCCEEECCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
RRSGRQREEHTVIQETTEVVVELDEPEYNPPQIDEPTPISAETPVAVELVAEPLPVPAEP
HHCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHH
VVEALPATVEAAQGAAESEQPAKPSRNRRRRSRKATAEAGEAATGASESTDEAGLTVAPA
HHHHHCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECC
VVEPSAPLPEPAGDLAMTAPAVTTGASESTAEAEVMVAPAVEEPSAPLPESAGDPAMTAP
EECCCCCCCCCCCCCEECCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
AAVSGNEATMASTAEVESSAGASTAEDGIGQVDLSVVFSEAEWELLRATVRELGKPATFQ
CCCCCCCCCEEHHHHHHHCCCCCCHHCCCCEEEEEEEECHHHHHHHHHHHHHHCCCHHHH
QLLSALQAARKQHGLPRTTEENRTMLKQAIHHGMFERTTRSRRVYYTLKTSE
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA