| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is hisD [H]
Identifier: 222526154
GI number: 222526154
Start: 3599498
End: 3600805
Strand: Direct
Name: hisD [H]
Synonym: Chy400_2911
Alternate gene names: 222526154
Gene position: 3599498-3600805 (Clockwise)
Preceding gene: 222526153
Following gene: 222526155
Centisome position: 68.32
GC content: 60.55
Gene sequence:
>1308_bases ATGACGGTTCCTATCATCCGCGACATTGATACTGCCCGTGCCGGTATTCTGCGGCGTATGCCACTCGATGACGATGCTGC GACGACTACTGCCGTTGCCGGGATTATTGCTGGCGTGCGCCAACGGGGCGATGCCGCATTACGCGAGTATACGCAACGCT TCGATGGGGTAGATCGGGCAACGCTTGAAATTCCGCGTGAGCGGTGGGCTGCGGCGGCAGCCGATCTTGATCCGGCGTTA CGTCATGCCCTCTTGCTGGCAATCGGCGAGATTCGGCGTTTTCATGAACGGCAACTGCGCAACTCCTGGGTTGAATTTAG CGTCGAAGGAGCACTGGGGCAGTTGGTGCGGCCCCTGGATCGAGTTGGGCTTTACGTTCCCGGTGGAGCAGCCCCGCTCC CGTCATCGTTGATCCACGCTGCGGTACCCGCACGGGTCGCCGGTGTGCGCGAGATTGTGGTCTGCTCGCCACCACAACGC TCGACCGGTGAACCGGCTGAGGTGGTGATGGCAGCGGCGCATCTGGCCGGAGTTGATCGCTTGTTTGCGGTTGGTGGCGC CCAGGCCATTGCCGCGCTGGCCTATGGCACCGAGAGCGTTCCACGGGTGGAGACGATAGCCGGGCCAGGGAATCGGTATG TCATTCAGGCGATGCGCCTGGTGTACGGTACGGTAGGAATCGTCAGTCTGCCAGGGCCAACCGAGACCCTGATCATCGCC GATCACACAGCCAGCCCGCGGGCGGTTGCGGCTGATCTGCTGGCACAGGCCGAACATGTCGAGGCAAGTGCCATTTTATT GACCCCTGATCCGGTGCTGGCCGAACAGGTGCAGGTTGAAGTCGAACGACAGCTTGCCACATTACCGTCACCAAATGCAC AGGCTGCCCGTGACGCAGTGACCCGGCGTGGTGGCATCGTGATTGTGCCCGACCTGGCAACAGCCTTCATGCTGGCCAAT GACTACGGGCCAGAGCATCTCTGCCTGTTGGTCGCCGACCCGTGGTCGTATGTCGGAATGGTGCGCAACGCAGGCGGTAT TTTCCTGGGCGAAGAGTCGTTTGAAGTACTGGGTGATTATGTTGCCGGGCCATCACACATCATGCCAACCGAGGGCACGG CGCGCTATGCTTCACCGGTCAACGTTGATAGTTTTCGCAAGATCATCTCGCTGGTTGGCCTGAATCGAAGTGGTCTCAAT CGGATTGGGCCAGCAGCGATGCGGTTAGCAGAAGCAGAGGGTCTCGTTGCGCACGCTGCTGCCGTCAAAGTTCGCTTCGA GTCGGCAGATACCGATGGGAGGGAGTAG
Upstream 100 bases:
>100_bases GTTACCAGGATGCGGTAGAATGACGGAAAGGATTGGTTTCAGAGCTGCATGACTATCAGCGTGATGGATGCAGCTAAGTA GCGTATGAGAGCGATACAGC
Downstream 100 bases:
>100_bases TATGTCAGGCTTTCTGGTTAGTTTTGTCAGTATTCTCTTCACTGTCCTGTTTTATGCCATTTTGGGACGTGTGCTGGCGT CATGGATCGACCCACAGGGT
Product: Histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MTVPIIRDIDTARAGILRRMPLDDDAATTTAVAGIIAGVRQRGDAALREYTQRFDGVDRATLEIPRERWAAAAADLDPAL RHALLLAIGEIRRFHERQLRNSWVEFSVEGALGQLVRPLDRVGLYVPGGAAPLPSSLIHAAVPARVAGVREIVVCSPPQR STGEPAEVVMAAAHLAGVDRLFAVGGAQAIAALAYGTESVPRVETIAGPGNRYVIQAMRLVYGTVGIVSLPGPTETLIIA DHTASPRAVAADLLAQAEHVEASAILLTPDPVLAEQVQVEVERQLATLPSPNAQAARDAVTRRGGIVIVPDLATAFMLAN DYGPEHLCLLVADPWSYVGMVRNAGGIFLGEESFEVLGDYVAGPSHIMPTEGTARYASPVNVDSFRKIISLVGLNRSGLN RIGPAAMRLAEAEGLVAHAAAVKVRFESADTDGRE
Sequences:
>Translated_435_residues MTVPIIRDIDTARAGILRRMPLDDDAATTTAVAGIIAGVRQRGDAALREYTQRFDGVDRATLEIPRERWAAAAADLDPAL RHALLLAIGEIRRFHERQLRNSWVEFSVEGALGQLVRPLDRVGLYVPGGAAPLPSSLIHAAVPARVAGVREIVVCSPPQR STGEPAEVVMAAAHLAGVDRLFAVGGAQAIAALAYGTESVPRVETIAGPGNRYVIQAMRLVYGTVGIVSLPGPTETLIIA DHTASPRAVAADLLAQAEHVEASAILLTPDPVLAEQVQVEVERQLATLPSPNAQAARDAVTRRGGIVIVPDLATAFMLAN DYGPEHLCLLVADPWSYVGMVRNAGGIFLGEESFEVLGDYVAGPSHIMPTEGTARYASPVNVDSFRKIISLVGLNRSGLN RIGPAAMRLAEAEGLVAHAAAVKVRFESADTDGRE >Mature_434_residues TVPIIRDIDTARAGILRRMPLDDDAATTTAVAGIIAGVRQRGDAALREYTQRFDGVDRATLEIPRERWAAAAADLDPALR HALLLAIGEIRRFHERQLRNSWVEFSVEGALGQLVRPLDRVGLYVPGGAAPLPSSLIHAAVPARVAGVREIVVCSPPQRS TGEPAEVVMAAAHLAGVDRLFAVGGAQAIAALAYGTESVPRVETIAGPGNRYVIQAMRLVYGTVGIVSLPGPTETLIIAD HTASPRAVAADLLAQAEHVEASAILLTPDPVLAEQVQVEVERQLATLPSPNAQAARDAVTRRGGIVIVPDLATAFMLAND YGPEHLCLLVADPWSYVGMVRNAGGIFLGEESFEVLGDYVAGPSHIMPTEGTARYASPVNVDSFRKIISLVGLNRSGLNR IGPAAMRLAEAEGLVAHAAAVKVRFESADTDGRE
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=434, Percent_Identity=39.8617511520737, Blast_Score=279, Evalue=3e-76, Organism=Saccharomyces cerevisiae, GI6319819, Length=443, Percent_Identity=37.4717832957111, Blast_Score=265, Evalue=2e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 46049; Mature: 45918
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPIIRDIDTARAGILRRMPLDDDAATTTAVAGIIAGVRQRGDAALREYTQRFDGVDRA CCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHH TLEIPRERWAAAAADLDPALRHALLLAIGEIRRFHERQLRNSWVEFSVEGALGQLVRPLD HHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHH RVGLYVPGGAAPLPSSLIHAAVPARVAGVREIVVCSPPQRSTGEPAEVVMAAAHLAGVDR HCCEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH LFAVGGAQAIAALAYGTESVPRVETIAGPGNRYVIQAMRLVYGTVGIVSLPGPTETLIIA HHHHCCHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCEEECCCCCEEEEEE DHTASPRAVAADLLAQAEHVEASAILLTPDPVLAEQVQVEVERQLATLPSPNAQAARDAV ECCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TRRGGIVIVPDLATAFMLANDYGPEHLCLLVADPWSYVGMVRNAGGIFLGEESFEVLGDY HHCCCEEEECCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHCCCCEEECCHHHHHHHHH VAGPSHIMPTEGTARYASPVNVDSFRKIISLVGLNRSGLNRIGPAAMRLAEAEGLVAHAA HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHCHHHHHHHHHCCHHEEEE AVKVRFESADTDGRE EEEEEEECCCCCCCC >Mature Secondary Structure TVPIIRDIDTARAGILRRMPLDDDAATTTAVAGIIAGVRQRGDAALREYTQRFDGVDRA CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHH TLEIPRERWAAAAADLDPALRHALLLAIGEIRRFHERQLRNSWVEFSVEGALGQLVRPLD HHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHH RVGLYVPGGAAPLPSSLIHAAVPARVAGVREIVVCSPPQRSTGEPAEVVMAAAHLAGVDR HCCEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH LFAVGGAQAIAALAYGTESVPRVETIAGPGNRYVIQAMRLVYGTVGIVSLPGPTETLIIA HHHHCCHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCEEECCCCCEEEEEE DHTASPRAVAADLLAQAEHVEASAILLTPDPVLAEQVQVEVERQLATLPSPNAQAARDAV ECCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TRRGGIVIVPDLATAFMLANDYGPEHLCLLVADPWSYVGMVRNAGGIFLGEESFEVLGDY HHCCCEEEECCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHCCCCEEECCHHHHHHHHH VAGPSHIMPTEGTARYASPVNVDSFRKIISLVGLNRSGLNRIGPAAMRLAEAEGLVAHAA HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHCHHHHHHHHHCCHHEEEE AVKVRFESADTDGRE EEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]