| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is fusA [H]
Identifier: 222526151
GI number: 222526151
Start: 3591835
End: 3593946
Strand: Direct
Name: fusA [H]
Synonym: Chy400_2908
Alternate gene names: 222526151
Gene position: 3591835-3593946 (Clockwise)
Preceding gene: 222526150
Following gene: 222526152
Centisome position: 68.17
GC content: 57.29
Gene sequence:
>2112_bases ATGCGAGCGTTCGAATCGGAAAGGATCCACAACATCGGCATATTCGGTCACCTCGGCAGCGGGAAGACAACGCTGGCCGA GGCAATGCTGATGACCGCCCACGCCATCCCGCGGATGGGGCGCGTCGAGGACGGGTCTACGACGAGTGACTACGACCCCG ACGAGCACCGACGCGGGATGTCTATTTCGCTGAGTGTGCTGCCGCTGGAGTGGAACGGCGATAAGATCAACCTGATCGAC GTGCCCGGTGCCGCTGATTTTGCCGGTGAAGCTGCCGCCGCGATGCGTATCATCGATGGCGCATTGATTGTGCTCGATGC AAGTGCCGGTGTTGAAGTCGGTACCGAACTCTTCTGGGAGATGGCCGTCCAACAGCGCATTCCACGCATCCTGTTTGTCA ATAAACTCGACCGCGAAAATGCGAATTTCTACCGCGTGATCGAGCAGGCCCGTGAGCTGCTCGATGCCGCTGTTATTCCG ATGCAGATTCCTATCGGTGCCGGTAAAGAGTTCAAGGGTATTATCTCGCTGCGTCAACAACGAGCCTGGCTGACCAGCCC GAAACACGATGGCGGCTACATCGAGGCTGATGTGCCGGCGGAACTCAATGATCTGATGCACGAGTGGCGCACCGCGCTGA TTGATAAAATTGCCGCAACCAATGATCATCTGATCGAACGGTATCTTGAAGGCGGTGAAGATGCGCTGACCCGCGAGGAA TTGCTGCTCGGTCTGCGCACCGGTATTGCCGATGGCTCAATCGTGCCGGTGTTCTGCGGTTCAGCAACTGAAGTCGTGGG GATTGCCCAGCTCCTTAACGGAATCGTCGACTCAATTCCTTCCGCAGGCCGCAAGACAACCACCGCCACCGATCTGAACA CCGACCAGGAGGTTGAGCTACGTCCAGACCGCGCCGAACCACTGGCAGCACTGGTCTTTAAGACGGTCTCTGACACCTAC GGCAAGCTTAGCTATTTCCGCGTCTTTTCGGGTGAGGTGCGGGCCGGTATGACGCTCATGAATGCACGCACCCGTAAGGA AGAGCGCGTCGCCCACGTGTATATTGTGCGTGGTAAAGAGCAGATTGAGGTTGAGTCGGTCGGGCCTGGCGATATTGGTT TGTTAACGAAGCTCGGTGATACGCAAACCAACGATACCCTCTGCCTGTCGTCGCGACCACTCGCACTTACTCCTATCCAA TTCCCGGCACCGGCCTTCATTGCAACGGTCAAACCACGCAGCCGTTCCGACCTTGACAAACTCAGCTCTGCGCTCACCAG GATGACCGAAGAGGATCCGTCTCTCCACGTATCCCGCGATCCGCGTACCGGCGAAGCGTTGCTCAGTGGTCTAAGCGAGA CGCATCTGCAGATCATTGCCGAACGGATGAAGCGCAAGTTCGATGTGAATATTGACCTCGAACTGCCCCGCATCCCCTAC CGCGAGACGATCCGTAGTGTTGCGACTGCTCAGTACCGCCACAAGAAACAAACCGGTGGGGCCGGTCAGTTCGCCGATGT CGCGCTGCGTGTTGAGCCGCTCCCACCCGATCCGAACCGTGAAGACCCGCTTGAGTTCGTGAACGAGATTGTGGGTGGCG TAATCTCGCGCGGGTTTATGCCGGCAATCGAAAAGGGTATTCGCGAGGCGATGGAAGAAGGCATCATTTCGGGTAATCCG GTTGTCGATGTACGGGCTGCTGTCTATGACGGGAAAGAACATCCGGTTGACTCGAAGGAAATTGCCTTCAAGACCGCTGC GAAAGAGGCGTTCCGCCTGGCTGCCCAAAAGGCCGGTGTGATCATTCTCGAACCGATTTACAACATGGAGATCATTGTTC CCGATCAGTTTGCCGGCGATGTGATGAGTGATATGAGCACGCGCCGTGGTCGGGTACAGGGGATGATGCCAACCGGCACC GGCAAGACGGTGATCCACGCCCAGGCTCCTCTGGTCGAGATTCAACGCTACGCAACCGATTTACGAGGGATGACCCAGGG CCGTGGCCGCTTCTCGATCAGTTTCGCGGGTTACGAAGAGGTGCCGCCACATCTGGTTAACCAGATTGTCGAAGCGCACA AGAAAGAACTGGAAGCGGCGCATAGCCACTGA
Upstream 100 bases:
>100_bases TGACGCAACCATCACAACCCTGATAATCTGTTCTTAACAACTTTATTTTCCTTTCCAGCACACGCCCAACGGGCGCGGGC TTGCGTCAAGGAGGACAGCT
Downstream 100 bases:
>100_bases GACGGTTCTGTCCGAAGGGATCAATGTAGGGGCGGGTTTGGAATAGGTTGAGAGTAGGGGCGGGTTTGGAACCCGCCCCT ACAGCATTGGGCCTATGGAA
Product: small GTP-binding protein
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 703; Mature: 703
Protein sequence:
>703_residues MRAFESERIHNIGIFGHLGSGKTTLAEAMLMTAHAIPRMGRVEDGSTTSDYDPDEHRRGMSISLSVLPLEWNGDKINLID VPGAADFAGEAAAAMRIIDGALIVLDASAGVEVGTELFWEMAVQQRIPRILFVNKLDRENANFYRVIEQARELLDAAVIP MQIPIGAGKEFKGIISLRQQRAWLTSPKHDGGYIEADVPAELNDLMHEWRTALIDKIAATNDHLIERYLEGGEDALTREE LLLGLRTGIADGSIVPVFCGSATEVVGIAQLLNGIVDSIPSAGRKTTTATDLNTDQEVELRPDRAEPLAALVFKTVSDTY GKLSYFRVFSGEVRAGMTLMNARTRKEERVAHVYIVRGKEQIEVESVGPGDIGLLTKLGDTQTNDTLCLSSRPLALTPIQ FPAPAFIATVKPRSRSDLDKLSSALTRMTEEDPSLHVSRDPRTGEALLSGLSETHLQIIAERMKRKFDVNIDLELPRIPY RETIRSVATAQYRHKKQTGGAGQFADVALRVEPLPPDPNREDPLEFVNEIVGGVISRGFMPAIEKGIREAMEEGIISGNP VVDVRAAVYDGKEHPVDSKEIAFKTAAKEAFRLAAQKAGVIILEPIYNMEIIVPDQFAGDVMSDMSTRRGRVQGMMPTGT GKTVIHAQAPLVEIQRYATDLRGMTQGRGRFSISFAGYEEVPPHLVNQIVEAHKKELEAAHSH
Sequences:
>Translated_703_residues MRAFESERIHNIGIFGHLGSGKTTLAEAMLMTAHAIPRMGRVEDGSTTSDYDPDEHRRGMSISLSVLPLEWNGDKINLID VPGAADFAGEAAAAMRIIDGALIVLDASAGVEVGTELFWEMAVQQRIPRILFVNKLDRENANFYRVIEQARELLDAAVIP MQIPIGAGKEFKGIISLRQQRAWLTSPKHDGGYIEADVPAELNDLMHEWRTALIDKIAATNDHLIERYLEGGEDALTREE LLLGLRTGIADGSIVPVFCGSATEVVGIAQLLNGIVDSIPSAGRKTTTATDLNTDQEVELRPDRAEPLAALVFKTVSDTY GKLSYFRVFSGEVRAGMTLMNARTRKEERVAHVYIVRGKEQIEVESVGPGDIGLLTKLGDTQTNDTLCLSSRPLALTPIQ FPAPAFIATVKPRSRSDLDKLSSALTRMTEEDPSLHVSRDPRTGEALLSGLSETHLQIIAERMKRKFDVNIDLELPRIPY RETIRSVATAQYRHKKQTGGAGQFADVALRVEPLPPDPNREDPLEFVNEIVGGVISRGFMPAIEKGIREAMEEGIISGNP VVDVRAAVYDGKEHPVDSKEIAFKTAAKEAFRLAAQKAGVIILEPIYNMEIIVPDQFAGDVMSDMSTRRGRVQGMMPTGT GKTVIHAQAPLVEIQRYATDLRGMTQGRGRFSISFAGYEEVPPHLVNQIVEAHKKELEAAHSH >Mature_703_residues MRAFESERIHNIGIFGHLGSGKTTLAEAMLMTAHAIPRMGRVEDGSTTSDYDPDEHRRGMSISLSVLPLEWNGDKINLID VPGAADFAGEAAAAMRIIDGALIVLDASAGVEVGTELFWEMAVQQRIPRILFVNKLDRENANFYRVIEQARELLDAAVIP MQIPIGAGKEFKGIISLRQQRAWLTSPKHDGGYIEADVPAELNDLMHEWRTALIDKIAATNDHLIERYLEGGEDALTREE LLLGLRTGIADGSIVPVFCGSATEVVGIAQLLNGIVDSIPSAGRKTTTATDLNTDQEVELRPDRAEPLAALVFKTVSDTY GKLSYFRVFSGEVRAGMTLMNARTRKEERVAHVYIVRGKEQIEVESVGPGDIGLLTKLGDTQTNDTLCLSSRPLALTPIQ FPAPAFIATVKPRSRSDLDKLSSALTRMTEEDPSLHVSRDPRTGEALLSGLSETHLQIIAERMKRKFDVNIDLELPRIPY RETIRSVATAQYRHKKQTGGAGQFADVALRVEPLPPDPNREDPLEFVNEIVGGVISRGFMPAIEKGIREAMEEGIISGNP VVDVRAAVYDGKEHPVDSKEIAFKTAAKEAFRLAAQKAGVIILEPIYNMEIIVPDQFAGDVMSDMSTRRGRVQGMMPTGT GKTVIHAQAPLVEIQRYATDLRGMTQGRGRFSISFAGYEEVPPHLVNQIVEAHKKELEAAHSH
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=707, Percent_Identity=33.6633663366337, Blast_Score=383, Evalue=1e-106, Organism=Homo sapiens, GI19923640, Length=721, Percent_Identity=30.7905686546463, Blast_Score=318, Evalue=1e-86, Organism=Homo sapiens, GI25306283, Length=444, Percent_Identity=31.5315315315315, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI25306287, Length=284, Percent_Identity=36.9718309859155, Blast_Score=167, Evalue=4e-41, Organism=Homo sapiens, GI157426893, Length=226, Percent_Identity=27.8761061946903, Blast_Score=83, Evalue=1e-15, Organism=Homo sapiens, GI4503483, Length=147, Percent_Identity=34.0136054421769, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI94966754, Length=134, Percent_Identity=36.5671641791045, Blast_Score=80, Evalue=7e-15, Organism=Homo sapiens, GI217272894, Length=138, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI217272892, Length=138, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=1e-13, Organism=Escherichia coli, GI1789738, Length=700, Percent_Identity=37.4285714285714, Blast_Score=477, Evalue=1e-136, Organism=Escherichia coli, GI1790835, Length=473, Percent_Identity=26.215644820296, Blast_Score=148, Evalue=1e-36, Organism=Escherichia coli, GI48994988, Length=177, Percent_Identity=31.638418079096, Blast_Score=87, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17533571, Length=685, Percent_Identity=32.1167883211679, Blast_Score=358, Evalue=4e-99, Organism=Caenorhabditis elegans, GI17556745, Length=724, Percent_Identity=24.7237569060773, Blast_Score=199, Evalue=5e-51, Organism=Caenorhabditis elegans, GI17552882, Length=805, Percent_Identity=21.7391304347826, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17506493, Length=158, Percent_Identity=32.2784810126582, Blast_Score=84, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17557151, Length=152, Percent_Identity=30.2631578947368, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71988819, Length=133, Percent_Identity=33.0827067669173, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71988811, Length=133, Percent_Identity=33.0827067669173, Blast_Score=70, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6323098, Length=702, Percent_Identity=33.3333333333333, Blast_Score=375, Evalue=1e-104, Organism=Saccharomyces cerevisiae, GI6322359, Length=520, Percent_Identity=28.0769230769231, Blast_Score=213, Evalue=9e-56, Organism=Saccharomyces cerevisiae, GI6324707, Length=816, Percent_Identity=23.1617647058824, Blast_Score=98, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6320593, Length=816, Percent_Identity=23.1617647058824, Blast_Score=98, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6322675, Length=142, Percent_Identity=35.2112676056338, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24582462, Length=698, Percent_Identity=34.3839541547278, Blast_Score=402, Evalue=1e-112, Organism=Drosophila melanogaster, GI221458488, Length=724, Percent_Identity=28.1767955801105, Blast_Score=274, Evalue=2e-73, Organism=Drosophila melanogaster, GI24585711, Length=150, Percent_Identity=34, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24585713, Length=150, Percent_Identity=34, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24585709, Length=150, Percent_Identity=34, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI21357743, Length=136, Percent_Identity=34.5588235294118, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI78706572, Length=153, Percent_Identity=30.0653594771242, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI28574573, Length=159, Percent_Identity=32.0754716981132, Blast_Score=67, Evalue=6e-11,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 77154; Mature: 77154
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAFESERIHNIGIFGHLGSGKTTLAEAMLMTAHAIPRMGRVEDGSTTSDYDPDEHRRGM CCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCC SISLSVLPLEWNGDKINLIDVPGAADFAGEAAAAMRIIDGALIVLDASAGVEVGTELFWE EEEEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHH MAVQQRIPRILFVNKLDRENANFYRVIEQARELLDAAVIPMQIPIGAGKEFKGIISLRQQ HHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHH RAWLTSPKHDGGYIEADVPAELNDLMHEWRTALIDKIAATNDHLIERYLEGGEDALTREE HHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHH LLLGLRTGIADGSIVPVFCGSATEVVGIAQLLNGIVDSIPSAGRKTTTATDLNTDQEVEL HHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEE RPDRAEPLAALVFKTVSDTYGKLSYFRVFSGEVRAGMTLMNARTRKEERVAHVYIVRGKE CCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCHHHCCHHHHHHHHHHHCEEEEEEEECCC QIEVESVGPGDIGLLTKLGDTQTNDTLCLSSRPLALTPIQFPAPAFIATVKPRSRSDLDK EEEEECCCCCCEEEEEECCCCCCCCEEEECCCCCEECCCCCCCCCEEEEECCCCCCHHHH LSSALTRMTEEDPSLHVSRDPRTGEALLSGLSETHLQIIAERMKRKFDVNIDLELPRIPY HHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCH RETIRSVATAQYRHKKQTGGAGQFADVALRVEPLPPDPNREDPLEFVNEIVGGVISRGFM HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCH PAIEKGIREAMEEGIISGNPVVDVRAAVYDGKEHPVDSKEIAFKTAAKEAFRLAAQKAGV HHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCE IILEPIYNMEIIVPDQFAGDVMSDMSTRRGRVQGMMPTGTGKTVIHAQAPLVEIQRYATD EEEECCCCCEEEECCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCHHHHHHHHHH LRGMTQGRGRFSISFAGYEEVPPHLVNQIVEAHKKELEAAHSH HHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRAFESERIHNIGIFGHLGSGKTTLAEAMLMTAHAIPRMGRVEDGSTTSDYDPDEHRRGM CCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCC SISLSVLPLEWNGDKINLIDVPGAADFAGEAAAAMRIIDGALIVLDASAGVEVGTELFWE EEEEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHH MAVQQRIPRILFVNKLDRENANFYRVIEQARELLDAAVIPMQIPIGAGKEFKGIISLRQQ HHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHH RAWLTSPKHDGGYIEADVPAELNDLMHEWRTALIDKIAATNDHLIERYLEGGEDALTREE HHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHH LLLGLRTGIADGSIVPVFCGSATEVVGIAQLLNGIVDSIPSAGRKTTTATDLNTDQEVEL HHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEE RPDRAEPLAALVFKTVSDTYGKLSYFRVFSGEVRAGMTLMNARTRKEERVAHVYIVRGKE CCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCHHHCCHHHHHHHHHHHCEEEEEEEECCC QIEVESVGPGDIGLLTKLGDTQTNDTLCLSSRPLALTPIQFPAPAFIATVKPRSRSDLDK EEEEECCCCCCEEEEEECCCCCCCCEEEECCCCCEECCCCCCCCCEEEEECCCCCCHHHH LSSALTRMTEEDPSLHVSRDPRTGEALLSGLSETHLQIIAERMKRKFDVNIDLELPRIPY HHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCH RETIRSVATAQYRHKKQTGGAGQFADVALRVEPLPPDPNREDPLEFVNEIVGGVISRGFM HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCH PAIEKGIREAMEEGIISGNPVVDVRAAVYDGKEHPVDSKEIAFKTAAKEAFRLAAQKAGV HHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCE IILEPIYNMEIIVPDQFAGDVMSDMSTRRGRVQGMMPTGTGKTVIHAQAPLVEIQRYATD EEEECCCCCEEEECCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCHHHHHHHHHH LRGMTQGRGRFSISFAGYEEVPPHLVNQIVEAHKKELEAAHSH HHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA