| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is aroC
Identifier: 222525964
GI number: 222525964
Start: 3355808
End: 3356902
Strand: Reverse
Name: aroC
Synonym: Chy400_2720
Alternate gene names: 222525964
Gene position: 3356902-3355808 (Counterclockwise)
Preceding gene: 222525965
Following gene: 222525963
Centisome position: 63.71
GC content: 59.45
Gene sequence:
>1095_bases ATGCCAGGCAATACATTTGGTCATGTCTTTCGCGTAACTACCTGGGGCGAGTCACACGGCCCGGCGGTTGGTTGCACTGT CGATGGCTGCCCGGCCGGTCTACCCCTCGACGTTGCCGATATTCAACGTGAACTGGATCGCCGTCGCGTCGGCCAGAGTC GGGTCAGCTCACAGCGCCGGGAAGCCGATGAGGTGCAGATACTTTCTGGCGTCTTCGAGGGGCGTACTACCGGTACCCCG ATCACGATGCTGGTATACAATACAGACGCTAAATCACACCATTACGAGAACATCAAAGATCGCTACCGTCCCGGCCACGC CGATTACACCTGGGATGCCAAGTACGGGTTTCGCGACTGGCGTGGCGGCGGACGCTCATCGGCACGCGAGACCATCGGGC GAGTCGCGGCAGGAGCTGTCGCCCGCCGTCTGCTGGCAACGTTTGGTATCACACTTGTTGGCTACACGCTGCAACTGGCC GATCTGCGGGCTGAAGTCTTCGACGAAGCAGAGATCGAGCGCAATATTATGCGCTGTCCCGATGCCCGTGTCGCAGCGCT GATGGTCGAGCGGGTTGATCAAGCCCGACGAGAACTCGACTCATTGGGGGGCATCGTTGAAGTGCGCGCACGTGGTGTAC CGCCCGGTCTCGGAGAACCGGTATTTGACAAATTGCAGGCCGATATTGGCAAGGCGATGTTCTCTATCCCGGCCATTAAA GGGGTCGAAATTGGTGAAGGGTTCGGGGTCGCAATGCTACGCGGCTCGCAGAACAACGATCCGTTCATTCGCCGGGATGA TGGTACCATCGGAACTGTATCCAATCATCACGGCGGTATTCTAGGTGGCATCTCAACCGGCGAAGAGATCGTTGTGCGAC TGGCCGCCAAACCACCGGCCAGCATCGCCCAACCGCAGCAGACGGTTGATCGCGACGGAAATCCGGTCACGATTGAAGTG CATGGACGGCATGATCCAACCGTCCTGCCCCGGCTGGTGCCGGTAGCCGAAGCGATGCTGGCGTTAGTCCTGGCCGATCA CCTGCTCCGTCAACGACTTGCCCGCGTGACGTGGGAGGATAGGAGTGATGACTGA
Upstream 100 bases:
>100_bases TCAAAGCAGTGTACGATCGAGTCTGGACGGAATGGAAAGCCGGCTCGTGGGGAAAAGAGATTATGCGTCGTGCTTGAATA TCATCAATCATGGAGATGTT
Downstream 100 bases:
>100_bases TCAGGAGGAAACCCCGAAGGTAAGACGCTGGTTACCACTGCTGGCATTGCTGGCCGGCCTGTGCTGGGCACTGGTTATCA GCGTGATCCTCAGGGTCGAT
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MPGNTFGHVFRVTTWGESHGPAVGCTVDGCPAGLPLDVADIQRELDRRRVGQSRVSSQRREADEVQILSGVFEGRTTGTP ITMLVYNTDAKSHHYENIKDRYRPGHADYTWDAKYGFRDWRGGGRSSARETIGRVAAGAVARRLLATFGITLVGYTLQLA DLRAEVFDEAEIERNIMRCPDARVAALMVERVDQARRELDSLGGIVEVRARGVPPGLGEPVFDKLQADIGKAMFSIPAIK GVEIGEGFGVAMLRGSQNNDPFIRRDDGTIGTVSNHHGGILGGISTGEEIVVRLAAKPPASIAQPQQTVDRDGNPVTIEV HGRHDPTVLPRLVPVAEAMLALVLADHLLRQRLARVTWEDRSDD
Sequences:
>Translated_364_residues MPGNTFGHVFRVTTWGESHGPAVGCTVDGCPAGLPLDVADIQRELDRRRVGQSRVSSQRREADEVQILSGVFEGRTTGTP ITMLVYNTDAKSHHYENIKDRYRPGHADYTWDAKYGFRDWRGGGRSSARETIGRVAAGAVARRLLATFGITLVGYTLQLA DLRAEVFDEAEIERNIMRCPDARVAALMVERVDQARRELDSLGGIVEVRARGVPPGLGEPVFDKLQADIGKAMFSIPAIK GVEIGEGFGVAMLRGSQNNDPFIRRDDGTIGTVSNHHGGILGGISTGEEIVVRLAAKPPASIAQPQQTVDRDGNPVTIEV HGRHDPTVLPRLVPVAEAMLALVLADHLLRQRLARVTWEDRSDD >Mature_363_residues PGNTFGHVFRVTTWGESHGPAVGCTVDGCPAGLPLDVADIQRELDRRRVGQSRVSSQRREADEVQILSGVFEGRTTGTPI TMLVYNTDAKSHHYENIKDRYRPGHADYTWDAKYGFRDWRGGGRSSARETIGRVAAGAVARRLLATFGITLVGYTLQLAD LRAEVFDEAEIERNIMRCPDARVAALMVERVDQARRELDSLGGIVEVRARGVPPGLGEPVFDKLQADIGKAMFSIPAIKG VEIGEGFGVAMLRGSQNNDPFIRRDDGTIGTVSNHHGGILGGISTGEEIVVRLAAKPPASIAQPQQTVDRDGNPVTIEVH GRHDPTVLPRLVPVAEAMLALVLADHLLRQRLARVTWEDRSDD
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family
Homologues:
Organism=Escherichia coli, GI1788669, Length=353, Percent_Identity=56.657223796034, Blast_Score=365, Evalue=1e-102, Organism=Saccharomyces cerevisiae, GI6321290, Length=365, Percent_Identity=46.8493150684932, Blast_Score=326, Evalue=4e-90,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROC_CHLAA (A9WI34)
Other databases:
- EMBL: CP000909 - RefSeq: YP_001636114.1 - ProteinModelPortal: A9WI34 - SMR: A9WI34 - GeneID: 5826987 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_2519 - HOGENOM: HBG292336 - OMA: SRFTTQR - ProtClustDB: PRK05382 - HAMAP: MF_00300_B - InterPro: IPR000453 - InterPro: IPR020541 - PANTHER: PTHR21085 - PIRSF: PIRSF001456 - TIGRFAMs: TIGR00033
Pfam domain/function: PF01264 Chorismate_synt; SSF103263 Chorismate_synth
EC number: =4.2.3.5
Molecular weight: Translated: 39706; Mature: 39575
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1; PS00788 CHORISMATE_SYNTHASE_2; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGNTFGHVFRVTTWGESHGPAVGCTVDGCPAGLPLDVADIQRELDRRRVGQSRVSSQRR CCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EADEVQILSGVFEGRTTGTPITMLVYNTDAKSHHYENIKDRYRPGHADYTWDAKYGFRDW HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHC RGGGRSSARETIGRVAAGAVARRLLATFGITLVGYTLQLADLRAEVFDEAEIERNIMRCP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DARVAALMVERVDQARRELDSLGGIVEVRARGVPPGLGEPVFDKLQADIGKAMFSIPAIK CHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC GVEIGEGFGVAMLRGSQNNDPFIRRDDGTIGTVSNHHGGILGGISTGEEIVVRLAAKPPA CEEECCCCCEEEEECCCCCCCEEEECCCCEECCCCCCCCEEECCCCCHHHEEEECCCCCH SIAQPQQTVDRDGNPVTIEVHGRHDPTVLPRLVPVAEAMLALVLADHLLRQRLARVTWED HHCCCHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RSDD CCCC >Mature Secondary Structure PGNTFGHVFRVTTWGESHGPAVGCTVDGCPAGLPLDVADIQRELDRRRVGQSRVSSQRR CCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EADEVQILSGVFEGRTTGTPITMLVYNTDAKSHHYENIKDRYRPGHADYTWDAKYGFRDW HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHC RGGGRSSARETIGRVAAGAVARRLLATFGITLVGYTLQLADLRAEVFDEAEIERNIMRCP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DARVAALMVERVDQARRELDSLGGIVEVRARGVPPGLGEPVFDKLQADIGKAMFSIPAIK CHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC GVEIGEGFGVAMLRGSQNNDPFIRRDDGTIGTVSNHHGGILGGISTGEEIVVRLAAKPPA CEEECCCCCEEEEECCCCCCCEEEECCCCEECCCCCCCCEEECCCCCHHHEEEECCCCCH SIAQPQQTVDRDGNPVTIEVHGRHDPTVLPRLVPVAEAMLALVLADHLLRQRLARVTWED HHCCCHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RSDD CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA