| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525959
Identifier: 222525959
GI number: 222525959
Start: 3351334
End: 3352023
Strand: Reverse
Name: 222525959
Synonym: Chy400_2715
Alternate gene names: NA
Gene position: 3352023-3351334 (Counterclockwise)
Preceding gene: 222525960
Following gene: 222525957
Centisome position: 63.62
GC content: 58.12
Gene sequence:
>690_bases ATGCGTGTACCTGCATCTGTCCAACCAACCAGGTCATTGTTGGGTGATCCCCGCATCCGCTGGGGTGGTGGTCTGGTCGC GGCAGTCTGGCTGATTGGTCTCGTCGGTGGATTGACCGGCCTGAGTGAGTGGCCGGCCCTCGTGCTCTACGTTCTGGGTG GATTGGGCGTTGCATTAACGCTGGGACGTACTCTCGGCTGGGCGGCAATTGGGGTAACGAAAAGAAATTTGCGCTCAGCA ACTATCTGGGGTGCCGGGATCGGTCTGGGTCTGATGTTCCTCGATTGGGTGAATACCTTTTTCTACTACCGTGGCGGCGG TGAACCAATGGCAGCCATGGAAGCCATTCTGGTCGGCATGGGACTGCTCTACCTCTTCCCTGTCCTGGTACTGGCAGAAG AGCTGCTCTGGCGAGGTGTATTGCTGATTGCGCTCCGTGAGGCCGGCTGGAATCCTCATCTGACCGTTGGATTGACCACC CTGCTGTACGCCCTCAATCATCTGTTTGTCGCACCGGTGCCCCTGTTTGAGCGCTGGTTGATGGTGGGCATGGCCCTCCC CATTGGGGTGATCGGAGGGTATCTGGTGCTACGCACACGCAATGTCTGGGCAGCAGTGTGGGTACACGGGTTGAGCATTG TGGCGATGATCGCCGACATCTTTATCATTCCTGGCCTGGCACGAGGCTAA
Upstream 100 bases:
>100_bases GGTGATCAGACCGCAACGTTTGTTGTGTACACTTCCGTCGCAATCGCACGTCAATGGCATACGATGAGAGACGACCGTAT TTCTGATTGCGGAGGCGATT
Downstream 100 bases:
>100_bases GACTCGGTGGTCGTAGGATTGGTCATCGTACCATCATACCTGCGACCTATCCACATTTTGTGGATAGATGTGGATAGAGG CACAAGATGTAGTAGCTAAC
Product: abortive infection protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MRVPASVQPTRSLLGDPRIRWGGGLVAAVWLIGLVGGLTGLSEWPALVLYVLGGLGVALTLGRTLGWAAIGVTKRNLRSA TIWGAGIGLGLMFLDWVNTFFYYRGGGEPMAAMEAILVGMGLLYLFPVLVLAEELLWRGVLLIALREAGWNPHLTVGLTT LLYALNHLFVAPVPLFERWLMVGMALPIGVIGGYLVLRTRNVWAAVWVHGLSIVAMIADIFIIPGLARG
Sequences:
>Translated_229_residues MRVPASVQPTRSLLGDPRIRWGGGLVAAVWLIGLVGGLTGLSEWPALVLYVLGGLGVALTLGRTLGWAAIGVTKRNLRSA TIWGAGIGLGLMFLDWVNTFFYYRGGGEPMAAMEAILVGMGLLYLFPVLVLAEELLWRGVLLIALREAGWNPHLTVGLTT LLYALNHLFVAPVPLFERWLMVGMALPIGVIGGYLVLRTRNVWAAVWVHGLSIVAMIADIFIIPGLARG >Mature_229_residues MRVPASVQPTRSLLGDPRIRWGGGLVAAVWLIGLVGGLTGLSEWPALVLYVLGGLGVALTLGRTLGWAAIGVTKRNLRSA TIWGAGIGLGLMFLDWVNTFFYYRGGGEPMAAMEAILVGMGLLYLFPVLVLAEELLWRGVLLIALREAGWNPHLTVGLTT LLYALNHLFVAPVPLFERWLMVGMALPIGVIGGYLVLRTRNVWAAVWVHGLSIVAMIADIFIIPGLARG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24649; Mature: 24649
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVPASVQPTRSLLGDPRIRWGGGLVAAVWLIGLVGGLTGLSEWPALVLYVLGGLGVALT CCCCCCCCHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LGRTLGWAAIGVTKRNLRSATIWGAGIGLGLMFLDWVNTFFYYRGGGEPMAAMEAILVGM HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHH GLLYLFPVLVLAEELLWRGVLLIALREAGWNPHLTVGLTTLLYALNHLFVAPVPLFERWL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH MVGMALPIGVIGGYLVLRTRNVWAAVWVHGLSIVAMIADIFIIPGLARG HHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRVPASVQPTRSLLGDPRIRWGGGLVAAVWLIGLVGGLTGLSEWPALVLYVLGGLGVALT CCCCCCCCHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LGRTLGWAAIGVTKRNLRSATIWGAGIGLGLMFLDWVNTFFYYRGGGEPMAAMEAILVGM HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHH GLLYLFPVLVLAEELLWRGVLLIALREAGWNPHLTVGLTTLLYALNHLFVAPVPLFERWL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH MVGMALPIGVIGGYLVLRTRNVWAAVWVHGLSIVAMIADIFIIPGLARG HHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA