Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222525923

Identifier: 222525923

GI number: 222525923

Start: 3311477

End: 3312466

Strand: Reverse

Name: 222525923

Synonym: Chy400_2678

Alternate gene names: NA

Gene position: 3312466-3311477 (Counterclockwise)

Preceding gene: 222525924

Following gene: 222525915

Centisome position: 62.87

GC content: 59.29

Gene sequence:

>990_bases
ATGCAACGACGACTACCAGTTCATTATGTCCTTGTATTGCTGGTTTGCCTGCTTGCCGCGTGTGCGACACCTTCCAGCCC
CAGCACCCCAACGCCCCCTCCAGCCCTGCAAGGCGACACCTTGAGCGGTCGTCTGCTCTTTAGTCGTGACGATGGTATCT
GGTTGTGGGAAGGTCGCACAGCGCGTCGCTTAATCAATCCACCGGTAACCCAACCGGCTTTCAATCCAACCGGCAACCAG
ATAGCCTGCATCGTCTTGCATGCTGGTGCAAGTGATCTGGTAATTACTGATACCGCGGGGGCAATGCTCGCGCAACTGAC
CCGCAACGAGCCGGCAGCACCGCCCGGTAGCATCGAGAGAGTGTACAGTGCGAAATGGGCATTTTATCCGACCTGGCTCC
CTGACGGAAGTGGCGTCCTGGTATCCGCCCAAATAGCGCCCCCCGTTGGCGATCCGCCAGCCGATGCGCCCCTCGCCATT
GTGCGCTACGATGTGAATGGCCGGCAGCAGGTTGTGTTTAGTGACGCCAACGCTCATCTGGGCAAAAGTGTCGTGCTGCC
CTCCGGCGATTTTATCGTTGTGCGTACCCCGCTCGGCAGCGATGGTCAGCAGCAACTCTTCCGCATTAGCAACAATCAGG
CTACGCCATTACCAGGAGCACCAACACCAGCATACGATCCGGCTCTCAGTCCCGATGGTACCTGGCTGGTTTTTGCCGTT
GGCATTAATGGCGGTAGCGATCTATACGCAATGCCGGCCAACGGCGGTTCGCCGATTCGCCTCACCGACATCGGTTCTGC
GCGATCACCGGCTTTTGCGCCCGACGGTAAAACACTGGCATTTCTGGCAATCCCACCCGGCGGGCGTGGGTTTGATCTCT
ACCTCGCCGAAGTAGCCATCGCTGGCGACACTCTGCAACTCAGTCCGCCCCGCCGGCTTTCGACCGACTTTGCCATCAAT
GCCGATGGTGGGCTGACCTGGGCGCGCTAG

Upstream 100 bases:

>100_bases
AGCCACCGCCTGGGGCCAAACGCTGGCCACAACGATTACTGGCCTGGCTGCGTCGTCGGATTGATATCTGAGCACTACAT
TCACCAAAATAGACAGAACT

Downstream 100 bases:

>100_bases
ATACCAACCTGATCGGCTACCGTCGCAGCCGGCTTCGTTGCCAGCGATATGGCCGCAACCGGTGGACGTTGACCGAGCAG
ATACGCTATCACATCGGCAG

Product: WD40 domain-containing protein

Products: NA

Alternate protein names: WD40 Domain Protein Beta Propeller; Acylaminoacyl-Peptidase

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MQRRLPVHYVLVLLVCLLAACATPSSPSTPTPPPALQGDTLSGRLLFSRDDGIWLWEGRTARRLINPPVTQPAFNPTGNQ
IACIVLHAGASDLVITDTAGAMLAQLTRNEPAAPPGSIERVYSAKWAFYPTWLPDGSGVLVSAQIAPPVGDPPADAPLAI
VRYDVNGRQQVVFSDANAHLGKSVVLPSGDFIVVRTPLGSDGQQQLFRISNNQATPLPGAPTPAYDPALSPDGTWLVFAV
GINGGSDLYAMPANGGSPIRLTDIGSARSPAFAPDGKTLAFLAIPPGGRGFDLYLAEVAIAGDTLQLSPPRRLSTDFAIN
ADGGLTWAR

Sequences:

>Translated_329_residues
MQRRLPVHYVLVLLVCLLAACATPSSPSTPTPPPALQGDTLSGRLLFSRDDGIWLWEGRTARRLINPPVTQPAFNPTGNQ
IACIVLHAGASDLVITDTAGAMLAQLTRNEPAAPPGSIERVYSAKWAFYPTWLPDGSGVLVSAQIAPPVGDPPADAPLAI
VRYDVNGRQQVVFSDANAHLGKSVVLPSGDFIVVRTPLGSDGQQQLFRISNNQATPLPGAPTPAYDPALSPDGTWLVFAV
GINGGSDLYAMPANGGSPIRLTDIGSARSPAFAPDGKTLAFLAIPPGGRGFDLYLAEVAIAGDTLQLSPPRRLSTDFAIN
ADGGLTWAR
>Mature_329_residues
MQRRLPVHYVLVLLVCLLAACATPSSPSTPTPPPALQGDTLSGRLLFSRDDGIWLWEGRTARRLINPPVTQPAFNPTGNQ
IACIVLHAGASDLVITDTAGAMLAQLTRNEPAAPPGSIERVYSAKWAFYPTWLPDGSGVLVSAQIAPPVGDPPADAPLAI
VRYDVNGRQQVVFSDANAHLGKSVVLPSGDFIVVRTPLGSDGQQQLFRISNNQATPLPGAPTPAYDPALSPDGTWLVFAV
GINGGSDLYAMPANGGSPIRLTDIGSARSPAFAPDGKTLAFLAIPPGGRGFDLYLAEVAIAGDTLQLSPPRRLSTDFAIN
ADGGLTWAR

Specific function: Unknown

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34497; Mature: 34497

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRLPVHYVLVLLVCLLAACATPSSPSTPTPPPALQGDTLSGRLLFSRDDGIWLWEGRT
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCC
ARRLINPPVTQPAFNPTGNQIACIVLHAGASDLVITDTAGAMLAQLTRNEPAAPPGSIER
HHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCHHHHHHHHHCCCCCCCCCCHHH
VYSAKWAFYPTWLPDGSGVLVSAQIAPPVGDPPADAPLAIVRYDVNGRQQVVFSDANAHL
HHCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCC
GKSVVLPSGDFIVVRTPLGSDGQQQLFRISNNQATPLPGAPTPAYDPALSPDGTWLVFAV
CCEEEECCCCEEEEECCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
GINGGSDLYAMPANGGSPIRLTDIGSARSPAFAPDGKTLAFLAIPPGGRGFDLYLAEVAI
EECCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEE
AGDTLQLSPPRRLSTDFAINADGGLTWAR
ECCEEEECCCCCCCCCEEEECCCCEEECC
>Mature Secondary Structure
MQRRLPVHYVLVLLVCLLAACATPSSPSTPTPPPALQGDTLSGRLLFSRDDGIWLWEGRT
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCC
ARRLINPPVTQPAFNPTGNQIACIVLHAGASDLVITDTAGAMLAQLTRNEPAAPPGSIER
HHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCHHHHHHHHHCCCCCCCCCCHHH
VYSAKWAFYPTWLPDGSGVLVSAQIAPPVGDPPADAPLAIVRYDVNGRQQVVFSDANAHL
HHCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCC
GKSVVLPSGDFIVVRTPLGSDGQQQLFRISNNQATPLPGAPTPAYDPALSPDGTWLVFAV
CCEEEECCCCEEEEECCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
GINGGSDLYAMPANGGSPIRLTDIGSARSPAFAPDGKTLAFLAIPPGGRGFDLYLAEVAI
EECCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEE
AGDTLQLSPPRRLSTDFAINADGGLTWAR
ECCEEEECCCCCCCCCEEEECCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA